Gene annotation
Transcriptome id Sobic.002G331000.1
Synonym
Functional annotation OsFBX462 - F-box domain containing protein, expressed
UniProt A0A1W0W6R0
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF91
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G02700 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os12g41300.1 : OsFBX462 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
2 Sobic.002G213800 auxin-repressed protein, putative, expressed -
3 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
4 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
5 Sobic.003G406700 expressed protein -
6 Sobic.009G197000 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
7 Sobic.004G199600 DUF581 domain containing protein, expressed -
8 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.010G270300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@rhodanese-like domain containing protein, putative, expressed -
10 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
11 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
13 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
14 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -
15 Sobic.007G129401 - -
16 Sobic.005G005000 cysteine-rich receptor-like protein kinase 4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
17 Sobic.010G270900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.009G109450 - -
19 Sobic.003G176100 expressed protein -
20 Sobic.009G085400 acyl-activating enzyme 14, putative, expressed -


Gene co-expression network
sample Sobic002G331000 Sobic002G331000 Sobic004G345900 Sobic004G345900 Sobic002G331000--Sobic004G345900 Sobic002G213800 Sobic002G213800 Sobic002G331000--Sobic002G213800 Sobic005G085200 Sobic005G085200 Sobic002G331000--Sobic005G085200 Sobic010G057400 Sobic010G057400 Sobic002G331000--Sobic010G057400 Sobic003G406700 Sobic003G406700 Sobic002G331000--Sobic003G406700 Sobic009G197000 Sobic009G197000 Sobic002G331000--Sobic009G197000 Sobic004G199600 Sobic004G199600 Sobic002G331000--Sobic004G199600 Sobic009G078500 Sobic009G078500 Sobic002G331000--Sobic009G078500 Sobic010G270300 Sobic010G270300 Sobic002G331000--Sobic010G270300 Sobic004G345900--Sobic010G057400 Sobic004G345900--Sobic005G085200 Sobic010G057300 Sobic010G057300 Sobic004G345900--Sobic010G057300 Sobic001G277000 Sobic001G277000 Sobic004G345900--Sobic001G277000 Sobic007G189800 Sobic007G189800 Sobic004G345900--Sobic007G189800 Sobic004G345900--Sobic004G199600 Sobic004G345900--Sobic002G213800 Sobic004G345900--Sobic010G270300 Sobic010G146200 Sobic010G146200 Sobic004G345900--Sobic010G146200 Sobic002G213800--Sobic004G345900 Sobic002G213800--Sobic001G277000 Sobic002G213800--Sobic002G331000 Sobic002G213800--Sobic007G189800 Sobic002G213800--Sobic010G270300 Sobic008G124100 Sobic008G124100 Sobic002G213800--Sobic008G124100 Sobic002G213800--Sobic010G057400 Sobic003G400266 Sobic003G400266 Sobic002G213800--Sobic003G400266 Sobic002G213800--Sobic005G085200 Sobic005G085200--Sobic010G057300 Sobic005G085600 Sobic005G085600 Sobic005G085200--Sobic005G085600 Sobic005G085200--Sobic004G345900 Sobic005G085200--Sobic007G189800 Sobic005G085200--Sobic004G199600 Sobic005G085200--Sobic010G057400 Sobic009G159700 Sobic009G159700 Sobic005G085200--Sobic009G159700 Sobic005G085200--Sobic009G078500 Sobic004G285800 Sobic004G285800 Sobic005G085200--Sobic004G285800 Sobic010G057400--Sobic004G345900 Sobic010G057400--Sobic010G057300 Sobic010G057400--Sobic005G085200 Sobic010G057400--Sobic004G199600 Sobic010G057400--Sobic010G270300 Sobic010G057400--Sobic007G189800 Sobic010G057400--Sobic001G277000 Sobic010G057400--Sobic010G146200 Sobic010G057400--Sobic009G078500 Sobic001G191200 Sobic001G191200 Sobic003G406700--Sobic001G191200 Sobic001G377000 Sobic001G377000 Sobic003G406700--Sobic001G377000 Sobic009G154600 Sobic009G154600 Sobic003G406700--Sobic009G154600 Sobic003G107300 Sobic003G107300 Sobic003G406700--Sobic003G107300 Sobic001G423100 Sobic001G423100 Sobic003G406700--Sobic001G423100 Sobic001G225500 Sobic001G225500 Sobic003G406700--Sobic001G225500 Sobic006G279800 Sobic006G279800 Sobic003G406700--Sobic006G279800 Sobic001G031300 Sobic001G031300 Sobic003G406700--Sobic001G031300 Sobic003G406700--Sobic002G331000 Sobic010G143400 Sobic010G143400 Sobic009G197000--Sobic010G143400 Sobic009G197000--Sobic005G085200 Sobic008G013900 Sobic008G013900 Sobic009G197000--Sobic008G013900 Sobic009G197000--Sobic004G345900 Sobic009G197000--Sobic001G191200 Sobic009G197000--Sobic002G331000 Sobic007G131200 Sobic007G131200 Sobic009G197000--Sobic007G131200 Sobic001G141300 Sobic001G141300 Sobic009G197000--Sobic001G141300 Sobic009G197000--Sobic003G406700 Sobic004G199600--Sobic009G078500 Sobic009G109450 Sobic009G109450 Sobic004G199600--Sobic009G109450 Sobic009G180200 Sobic009G180200 Sobic004G199600--Sobic009G180200 Sobic005G130100 Sobic005G130100 Sobic004G199600--Sobic005G130100 Sobic009G231300 Sobic009G231300 Sobic004G199600--Sobic009G231300 Sobic004G199600--Sobic010G146200 Sobic001G363100 Sobic001G363100 Sobic004G199600--Sobic001G363100 Sobic005G121800 Sobic005G121800 Sobic004G199600--Sobic005G121800 Sobic004G199600--Sobic007G189800 Sobic009G078500--Sobic004G199600 Sobic009G078500--Sobic005G130100 Sobic009G078500--Sobic009G109450 Sobic009G078500--Sobic009G180200 Sobic009G078500--Sobic009G231300 Sobic009G078500--Sobic010G146200 Sobic009G078500--Sobic001G363100 Sobic009G064766 Sobic009G064766 Sobic009G078500--Sobic009G064766 Sobic003G176100 Sobic003G176100 Sobic009G078500--Sobic003G176100 Sobic010G270300--Sobic005G130100 Sobic010G270300--Sobic009G064766 Sobic010G270300--Sobic009G078500 Sobic010G270300--Sobic010G057300 Sobic010G270300--Sobic004G199600 Sobic010G270300--Sobic010G057400 Sobic010G270300--Sobic004G345900 Sobic010G270300--Sobic005G085200 Sobic010G270300--Sobic010G146200
Octagon: transcription factors


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