Gene annotation
Transcriptome id Sobic.002G213800.2
Synonym Sb02g025640
Functional annotation auxin-repressed protein, putative, expressed
UniProt A0A1W0W5B9
Pfam PF05564
Panther DB PTHR33565 PTHR33565:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56220 : Dormancy/auxin associated family protein
RAP-DB (Rice) LOC_Os09g26620.5 : auxin-repressed protein, putative, expressed
MaizeGDB (Corn) Zm00025a005768
Brachypodium KQJ90368 , KQJ90369
Barley HORVU5Hr1G062510.4 , HORVU5Hr1G062510.1 , HORVU5Hr1G062510.2
Wheat -
Populus -


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cDNA sequences
Sobic.002G213800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
2 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.002G331000 OsFBX462 - F-box domain containing protein, expressed -
4 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
5 Sobic.010G270300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@rhodanese-like domain containing protein, putative, expressed -
6 Sobic.008G124100 - -
7 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
8 Sobic.003G400266 - -
9 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
10 Sobic.004G199600 DUF581 domain containing protein, expressed -
11 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
12 Sobic.009G197000 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
13 Sobic.009G064766 - -
14 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -
16 Sobic.003G176100 expressed protein -
17 Sobic.008G013900 O-methyltransferase, putative, expressed -
18 Sobic.005G083733 - -
19 Sobic.007G129401 - -
20 Sobic.007G129100 - -


Gene co-expression network
sample Sobic002G213800 Sobic002G213800 Sobic004G345900 Sobic004G345900 Sobic002G213800--Sobic004G345900 Sobic001G277000 Sobic001G277000 Sobic002G213800--Sobic001G277000 Sobic002G331000 Sobic002G331000 Sobic002G213800--Sobic002G331000 Sobic007G189800 Sobic007G189800 Sobic002G213800--Sobic007G189800 Sobic010G270300 Sobic010G270300 Sobic002G213800--Sobic010G270300 Sobic008G124100 Sobic008G124100 Sobic002G213800--Sobic008G124100 Sobic010G057400 Sobic010G057400 Sobic002G213800--Sobic010G057400 Sobic003G400266 Sobic003G400266 Sobic002G213800--Sobic003G400266 Sobic005G085200 Sobic005G085200 Sobic002G213800--Sobic005G085200 Sobic004G345900--Sobic010G057400 Sobic004G345900--Sobic005G085200 Sobic010G057300 Sobic010G057300 Sobic004G345900--Sobic010G057300 Sobic004G345900--Sobic001G277000 Sobic004G345900--Sobic007G189800 Sobic004G199600 Sobic004G199600 Sobic004G345900--Sobic004G199600 Sobic004G345900--Sobic002G213800 Sobic004G345900--Sobic010G270300 Sobic010G146200 Sobic010G146200 Sobic004G345900--Sobic010G146200 Sobic001G277000--Sobic008G124100 Sobic001G277000--Sobic007G189800 Sobic009G064766 Sobic009G064766 Sobic001G277000--Sobic009G064766 Sobic001G277000--Sobic004G345900 Sobic009G078500 Sobic009G078500 Sobic001G277000--Sobic009G078500 Sobic001G277000--Sobic002G213800 Sobic001G277000--Sobic004G199600 Sobic001G277000--Sobic005G085200 Sobic001G277000--Sobic010G146200 Sobic002G331000--Sobic004G345900 Sobic002G331000--Sobic002G213800 Sobic002G331000--Sobic005G085200 Sobic002G331000--Sobic010G057400 Sobic003G406700 Sobic003G406700 Sobic002G331000--Sobic003G406700 Sobic009G197000 Sobic009G197000 Sobic002G331000--Sobic009G197000 Sobic002G331000--Sobic004G199600 Sobic002G331000--Sobic009G078500 Sobic002G331000--Sobic010G270300 Sobic007G189800--Sobic001G277000 Sobic007G189800--Sobic010G146200 Sobic007G189800--Sobic008G124100 Sobic007G189800--Sobic009G064766 Sobic005G085600 Sobic005G085600 Sobic007G189800--Sobic005G085600 Sobic007G189800--Sobic005G085200 Sobic005G003200 Sobic005G003200 Sobic007G189800--Sobic005G003200 Sobic007G189800--Sobic009G078500 Sobic006G249000 Sobic006G249000 Sobic007G189800--Sobic006G249000 Sobic005G130100 Sobic005G130100 Sobic010G270300--Sobic005G130100 Sobic010G270300--Sobic009G064766 Sobic010G270300--Sobic009G078500 Sobic010G270300--Sobic010G057300 Sobic010G270300--Sobic004G199600 Sobic010G270300--Sobic010G057400 Sobic010G270300--Sobic004G345900 Sobic010G270300--Sobic005G085200 Sobic010G270300--Sobic010G146200 Sobic008G124100--Sobic001G277000 Sobic008G124100--Sobic009G064766 Sobic008G013900 Sobic008G013900 Sobic008G124100--Sobic008G013900 Sobic008G124100--Sobic007G189800 Sobic003G176100 Sobic003G176100 Sobic008G124100--Sobic003G176100 Sobic008G124100--Sobic010G146200 Sobic006G020600 Sobic006G020600 Sobic008G124100--Sobic006G020600 Sobic002G051400 Sobic002G051400 Sobic008G124100--Sobic002G051400 Sobic001G164200 Sobic001G164200 Sobic008G124100--Sobic001G164200 Sobic010G057400--Sobic004G345900 Sobic010G057400--Sobic010G057300 Sobic010G057400--Sobic005G085200 Sobic010G057400--Sobic004G199600 Sobic010G057400--Sobic010G270300 Sobic010G057400--Sobic007G189800 Sobic010G057400--Sobic001G277000 Sobic010G057400--Sobic010G146200 Sobic010G057400--Sobic009G078500 Sobic003G400266--Sobic007G189800 Sobic005G083733 Sobic005G083733 Sobic003G400266--Sobic005G083733 Sobic003G400266--Sobic006G249000 Sobic003G148700 Sobic003G148700 Sobic003G400266--Sobic003G148700 Sobic003G400266--Sobic001G277000 Sobic003G400266--Sobic005G003200 Sobic003G400266--Sobic002G213800 Sobic003G400266--Sobic004G345900 Sobic003G400266--Sobic008G124100 Sobic005G085200--Sobic010G057300 Sobic005G085200--Sobic005G085600 Sobic005G085200--Sobic004G345900 Sobic005G085200--Sobic007G189800 Sobic005G085200--Sobic004G199600 Sobic005G085200--Sobic010G057400 Sobic009G159700 Sobic009G159700 Sobic005G085200--Sobic009G159700 Sobic005G085200--Sobic009G078500 Sobic004G285800 Sobic004G285800 Sobic005G085200--Sobic004G285800
Octagon: transcription factors


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