Gene annotation
Transcriptome id Sobic.009G197000.1
Synonym Sb09g025510
Functional annotation O-methyltransferase family 2 protein (At) (PubMedID : 27208977)
O-methyltransferase, putative, expressed
UniProt C5Z0X9
Pfam PF00891 PF08100
Panther DB PTHR11746:SF95 PTHR11746
NCBI CDD KOG3178; Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases
KEGG Orthology -
Gene Ontology GO:0008171; O-methyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G35160 : O-methyltransferase family protein
RAP-DB (Rice) LOC_Os05g43930.1 : O-methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a037940
Brachypodium -
Barley -
Wheat TraesCS1B02G348100 , TraesCS1A02G335200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G143400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
3 Sobic.008G013900 O-methyltransferase, putative, expressed -
4 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
5 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
6 Sobic.002G331000 OsFBX462 - F-box domain containing protein, expressed -
7 Sobic.007G131200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G141300 RNA recognition motif containing protein, expressed -
9 Sobic.003G406700 expressed protein -
10 Sobic.006G279800 expressed protein -
11 Sobic.002G213800 auxin-repressed protein, putative, expressed -
12 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.010G270900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
15 Sobic.008G124100 - -
16 Sobic.004G315100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
17 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
18 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
19 Sobic.001G164200 cytochrome P450, putative, expressed -
20 Sobic.006G241200 expressed protein -


Gene co-expression network
sample Sobic009G197000 Sobic009G197000 Sobic010G143400 Sobic010G143400 Sobic009G197000--Sobic010G143400 Sobic005G085200 Sobic005G085200 Sobic009G197000--Sobic005G085200 Sobic008G013900 Sobic008G013900 Sobic009G197000--Sobic008G013900 Sobic004G345900 Sobic004G345900 Sobic009G197000--Sobic004G345900 Sobic001G191200 Sobic001G191200 Sobic009G197000--Sobic001G191200 Sobic002G331000 Sobic002G331000 Sobic009G197000--Sobic002G331000 Sobic007G131200 Sobic007G131200 Sobic009G197000--Sobic007G131200 Sobic001G141300 Sobic001G141300 Sobic009G197000--Sobic001G141300 Sobic003G406700 Sobic003G406700 Sobic009G197000--Sobic003G406700 Sobic010G143400--Sobic007G131200 Sobic010G143400--Sobic009G197000 Sobic002G128400 Sobic002G128400 Sobic010G143400--Sobic002G128400 Sobic010G143400--Sobic008G013900 Sobic009G162401 Sobic009G162401 Sobic010G143400--Sobic009G162401 Sobic010G270900 Sobic010G270900 Sobic010G143400--Sobic010G270900 Sobic001G246200 Sobic001G246200 Sobic010G143400--Sobic001G246200 Sobic004G315100 Sobic004G315100 Sobic010G143400--Sobic004G315100 Sobic006G099501 Sobic006G099501 Sobic010G143400--Sobic006G099501 Sobic010G057300 Sobic010G057300 Sobic005G085200--Sobic010G057300 Sobic005G085600 Sobic005G085600 Sobic005G085200--Sobic005G085600 Sobic005G085200--Sobic004G345900 Sobic007G189800 Sobic007G189800 Sobic005G085200--Sobic007G189800 Sobic004G199600 Sobic004G199600 Sobic005G085200--Sobic004G199600 Sobic010G057400 Sobic010G057400 Sobic005G085200--Sobic010G057400 Sobic009G159700 Sobic009G159700 Sobic005G085200--Sobic009G159700 Sobic009G078500 Sobic009G078500 Sobic005G085200--Sobic009G078500 Sobic004G285800 Sobic004G285800 Sobic005G085200--Sobic004G285800 Sobic001G164200 Sobic001G164200 Sobic008G013900--Sobic001G164200 Sobic001G182300 Sobic001G182300 Sobic008G013900--Sobic001G182300 Sobic008G124100 Sobic008G124100 Sobic008G013900--Sobic008G124100 Sobic003G219000 Sobic003G219000 Sobic008G013900--Sobic003G219000 Sobic007G129401 Sobic007G129401 Sobic008G013900--Sobic007G129401 Sobic008G049000 Sobic008G049000 Sobic008G013900--Sobic008G049000 Sobic002G094500 Sobic002G094500 Sobic008G013900--Sobic002G094500 Sobic003G176100 Sobic003G176100 Sobic008G013900--Sobic003G176100 Sobic008G013900--Sobic010G143400 Sobic004G345900--Sobic010G057400 Sobic004G345900--Sobic005G085200 Sobic004G345900--Sobic010G057300 Sobic001G277000 Sobic001G277000 Sobic004G345900--Sobic001G277000 Sobic004G345900--Sobic007G189800 Sobic004G345900--Sobic004G199600 Sobic002G213800 Sobic002G213800 Sobic004G345900--Sobic002G213800 Sobic010G270300 Sobic010G270300 Sobic004G345900--Sobic010G270300 Sobic010G146200 Sobic010G146200 Sobic004G345900--Sobic010G146200 Sobic001G191200--Sobic003G406700 Sobic001G078200 Sobic001G078200 Sobic001G191200--Sobic001G078200 Sobic009G154600 Sobic009G154600 Sobic001G191200--Sobic009G154600 Sobic001G377000 Sobic001G377000 Sobic001G191200--Sobic001G377000 Sobic009G213400 Sobic009G213400 Sobic001G191200--Sobic009G213400 Sobic001G191200--Sobic005G085200 Sobic003G107300 Sobic003G107300 Sobic001G191200--Sobic003G107300 Sobic001G423100 Sobic001G423100 Sobic001G191200--Sobic001G423100 Sobic001G225500 Sobic001G225500 Sobic001G191200--Sobic001G225500 Sobic002G331000--Sobic004G345900 Sobic002G331000--Sobic002G213800 Sobic002G331000--Sobic005G085200 Sobic002G331000--Sobic010G057400 Sobic002G331000--Sobic003G406700 Sobic002G331000--Sobic009G197000 Sobic002G331000--Sobic004G199600 Sobic002G331000--Sobic009G078500 Sobic002G331000--Sobic010G270300 Sobic007G131200--Sobic010G143400 Sobic008G148400 Sobic008G148400 Sobic007G131200--Sobic008G148400 Sobic004G070200 Sobic004G070200 Sobic007G131200--Sobic004G070200 Sobic003G030400 Sobic003G030400 Sobic007G131200--Sobic003G030400 Sobic007G131200--Sobic009G197000 Sobic003G222600 Sobic003G222600 Sobic007G131200--Sobic003G222600 Sobic006G265400 Sobic006G265400 Sobic007G131200--Sobic006G265400 Sobic001G426400 Sobic001G426400 Sobic007G131200--Sobic001G426400 Sobic007G131200--Sobic003G406700 Sobic008G185900 Sobic008G185900 Sobic001G141300--Sobic008G185900 Sobic003G401400 Sobic003G401400 Sobic001G141300--Sobic003G401400 Sobic001G141300--Sobic009G197000 Sobic001G141300--Sobic001G426400 Sobic001G141300--Sobic001G191200 Sobic001G141300--Sobic006G265400 Sobic006G279800 Sobic006G279800 Sobic001G141300--Sobic006G279800 Sobic001G141300--Sobic001G423100 Sobic001G141300--Sobic001G078200 Sobic003G406700--Sobic001G191200 Sobic003G406700--Sobic001G377000 Sobic003G406700--Sobic009G154600 Sobic003G406700--Sobic003G107300 Sobic003G406700--Sobic001G423100 Sobic003G406700--Sobic001G225500 Sobic003G406700--Sobic006G279800 Sobic001G031300 Sobic001G031300 Sobic003G406700--Sobic001G031300 Sobic003G406700--Sobic002G331000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.