Gene annotation
Transcriptome id Sobic.010G143400.1
Synonym Sb10g017810
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Z315
Pfam PF13370 PF00226
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23240 : DNAJ heat shock N-terminal domain-containing protein
RAP-DB (Rice) LOC_Os06g28050.1 : expressed protein
MaizeGDB (Corn) Zm00025a042388
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.010G143400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G131200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.009G197000 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
3 Sobic.002G128400 WRKY115, expressed -
4 Sobic.008G013900 O-methyltransferase, putative, expressed -
5 Sobic.009G162401 - -
6 Sobic.010G270900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.001G246200 MBTB49 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.004G315100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
9 Sobic.006G099501 - -
10 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
11 Sobic.001G164200 cytochrome P450, putative, expressed -
12 Sobic.002G094500 cytochrome P450, putative, expressed -
13 Sobic.002G172600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional protein folD, putative, expressed -
14 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
15 Sobic.005G085100 - -
16 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
17 Sobic.006G241200 expressed protein -
18 Sobic.001G182300 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
20 Sobic.006G265400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -


Gene co-expression network
sample Sobic010G143400 Sobic010G143400 Sobic007G131200 Sobic007G131200 Sobic010G143400--Sobic007G131200 Sobic009G197000 Sobic009G197000 Sobic010G143400--Sobic009G197000 Sobic002G128400 Sobic002G128400 Sobic010G143400--Sobic002G128400 Sobic008G013900 Sobic008G013900 Sobic010G143400--Sobic008G013900 Sobic009G162401 Sobic009G162401 Sobic010G143400--Sobic009G162401 Sobic010G270900 Sobic010G270900 Sobic010G143400--Sobic010G270900 Sobic001G246200 Sobic001G246200 Sobic010G143400--Sobic001G246200 Sobic004G315100 Sobic004G315100 Sobic010G143400--Sobic004G315100 Sobic006G099501 Sobic006G099501 Sobic010G143400--Sobic006G099501 Sobic007G131200--Sobic010G143400 Sobic008G148400 Sobic008G148400 Sobic007G131200--Sobic008G148400 Sobic004G070200 Sobic004G070200 Sobic007G131200--Sobic004G070200 Sobic003G030400 Sobic003G030400 Sobic007G131200--Sobic003G030400 Sobic007G131200--Sobic009G197000 Sobic003G222600 Sobic003G222600 Sobic007G131200--Sobic003G222600 Sobic006G265400 Sobic006G265400 Sobic007G131200--Sobic006G265400 Sobic001G426400 Sobic001G426400 Sobic007G131200--Sobic001G426400 Sobic003G406700 Sobic003G406700 Sobic007G131200--Sobic003G406700 Sobic009G197000--Sobic010G143400 Sobic005G085200 Sobic005G085200 Sobic009G197000--Sobic005G085200 Sobic009G197000--Sobic008G013900 Sobic004G345900 Sobic004G345900 Sobic009G197000--Sobic004G345900 Sobic001G191200 Sobic001G191200 Sobic009G197000--Sobic001G191200 Sobic002G331000 Sobic002G331000 Sobic009G197000--Sobic002G331000 Sobic009G197000--Sobic007G131200 Sobic001G141300 Sobic001G141300 Sobic009G197000--Sobic001G141300 Sobic009G197000--Sobic003G406700 Sobic005G085100 Sobic005G085100 Sobic002G128400--Sobic005G085100 Sobic002G128400--Sobic010G143400 Sobic002G128400--Sobic009G162401 Sobic005G148400 Sobic005G148400 Sobic002G128400--Sobic005G148400 Sobic005G043400 Sobic005G043400 Sobic002G128400--Sobic005G043400 Sobic002G128400--Sobic001G246200 Sobic005G148500 Sobic005G148500 Sobic002G128400--Sobic005G148500 Sobic005G221550 Sobic005G221550 Sobic002G128400--Sobic005G221550 Sobic002G212700 Sobic002G212700 Sobic002G128400--Sobic002G212700 Sobic001G164200 Sobic001G164200 Sobic008G013900--Sobic001G164200 Sobic001G182300 Sobic001G182300 Sobic008G013900--Sobic001G182300 Sobic008G124100 Sobic008G124100 Sobic008G013900--Sobic008G124100 Sobic003G219000 Sobic003G219000 Sobic008G013900--Sobic003G219000 Sobic007G129401 Sobic007G129401 Sobic008G013900--Sobic007G129401 Sobic008G049000 Sobic008G049000 Sobic008G013900--Sobic008G049000 Sobic002G094500 Sobic002G094500 Sobic008G013900--Sobic002G094500 Sobic003G176100 Sobic003G176100 Sobic008G013900--Sobic003G176100 Sobic008G013900--Sobic010G143400 Sobic009G162401--Sobic005G085100 Sobic009G162401--Sobic002G128400 Sobic009G162401--Sobic010G143400 Sobic009G162401--Sobic005G148400 Sobic009G162401--Sobic001G246200 Sobic001G271000 Sobic001G271000 Sobic009G162401--Sobic001G271000 Sobic009G162401--Sobic005G148500 Sobic005G170800 Sobic005G170800 Sobic009G162401--Sobic005G170800 Sobic009G162401--Sobic008G013900 Sobic006G241200 Sobic006G241200 Sobic010G270900--Sobic006G241200 Sobic002G074300 Sobic002G074300 Sobic010G270900--Sobic002G074300 Sobic010G270900--Sobic008G013900 Sobic010G270900--Sobic010G143400 Sobic008G015300 Sobic008G015300 Sobic010G270900--Sobic008G015300 Sobic010G270900--Sobic001G164200 Sobic010G270900--Sobic009G197000 Sobic004G011566 Sobic004G011566 Sobic010G270900--Sobic004G011566 Sobic010G270900--Sobic005G085200 Sobic005G173366 Sobic005G173366 Sobic001G246200--Sobic005G173366 Sobic001G246200--Sobic007G129401 Sobic001G246200--Sobic005G043400 Sobic001G246200--Sobic010G143400 Sobic001G246200--Sobic002G128400 Sobic001G246200--Sobic008G013900 Sobic005G059200 Sobic005G059200 Sobic001G246200--Sobic005G059200 Sobic001G246200--Sobic009G162401 Sobic001G246200--Sobic004G070200 Sobic004G315100--Sobic004G345900 Sobic004G315100--Sobic010G143400 Sobic010G057400 Sobic010G057400 Sobic004G315100--Sobic010G057400 Sobic004G315100--Sobic009G197000 Sobic001G277000 Sobic001G277000 Sobic004G315100--Sobic001G277000 Sobic004G216700 Sobic004G216700 Sobic004G315100--Sobic004G216700 Sobic009G159700 Sobic009G159700 Sobic004G315100--Sobic009G159700 Sobic004G315100--Sobic007G131200 Sobic004G315100--Sobic005G085200 Sobic006G099501--Sobic005G043400 Sobic002G059800 Sobic002G059800 Sobic006G099501--Sobic002G059800 Sobic006G099501--Sobic010G143400 Sobic006G099501--Sobic002G128400 Sobic008G106400 Sobic008G106400 Sobic006G099501--Sobic008G106400 Sobic006G099501--Sobic005G148500 Sobic006G099501--Sobic005G085100 Sobic006G099501--Sobic001G164200 Sobic006G099501--Sobic002G094500
Octagon: transcription factors


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