Gene annotation
Transcriptome id Sobic.001G246200.1
Synonym BPM1, Sb01g021780, ATBPM1
Functional annotation MBTB49 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt C5X1I9
Pfam PF00917 PF00651
Panther DB PTHR26379 PTHR26379:SF173
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19000 : BTB-POZ and MATH domain 1
RAP-DB (Rice) LOC_Os10g29230.1 : MBTB49 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G173366 - -
2 Sobic.007G129401 - -
3 Sobic.005G043400 XRN 5-3 exonuclease N-terminus family protein, expressed -
4 Sobic.010G143400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.002G128400 WRKY115, expressed -
6 Sobic.008G013900 O-methyltransferase, putative, expressed -
7 Sobic.005G059200 bromodomain domain containing protein, expressed -
8 Sobic.009G162401 - -
9 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
10 Sobic.005G085100 - -
11 Sobic.009G085400 acyl-activating enzyme 14, putative, expressed -
12 Sobic.004G196500 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.001G164200 cytochrome P450, putative, expressed -
14 Sobic.010G068200 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
15 Sobic.007G131200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
17 Sobic.003G068400 receptor kinase, putative, expressed -
18 Sobic.006G099501 - -
19 Sobic.007G031800 expressed protein -
20 Sobic.005G148500 OsFBX402 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G246200 Sobic001G246200 Sobic005G173366 Sobic005G173366 Sobic001G246200--Sobic005G173366 Sobic007G129401 Sobic007G129401 Sobic001G246200--Sobic007G129401 Sobic005G043400 Sobic005G043400 Sobic001G246200--Sobic005G043400 Sobic010G143400 Sobic010G143400 Sobic001G246200--Sobic010G143400 Sobic002G128400 Sobic002G128400 Sobic001G246200--Sobic002G128400 Sobic008G013900 Sobic008G013900 Sobic001G246200--Sobic008G013900 Sobic005G059200 Sobic005G059200 Sobic001G246200--Sobic005G059200 Sobic009G162401 Sobic009G162401 Sobic001G246200--Sobic009G162401 Sobic004G070200 Sobic004G070200 Sobic001G246200--Sobic004G070200 Sobic005G173366--Sobic007G129401 Sobic009G026400 Sobic009G026400 Sobic005G173366--Sobic009G026400 Sobic002G060500 Sobic002G060500 Sobic005G173366--Sobic002G060500 Sobic005G173366--Sobic005G043400 Sobic004G196500 Sobic004G196500 Sobic005G173366--Sobic004G196500 Sobic009G101600 Sobic009G101600 Sobic005G173366--Sobic009G101600 Sobic003G416100 Sobic003G416100 Sobic005G173366--Sobic003G416100 SobicK010000 SobicK010000 Sobic005G173366--SobicK010000 Sobic007G059300 Sobic007G059300 Sobic005G173366--Sobic007G059300 Sobic007G129401--Sobic009G026400 Sobic007G129401--Sobic002G060500 Sobic007G129401--Sobic005G173366 Sobic007G129401--Sobic004G196500 Sobic007G129401--Sobic008G013900 Sobic007G129401--Sobic005G043400 Sobic001G164200 Sobic001G164200 Sobic007G129401--Sobic001G164200 Sobic010G068200 Sobic010G068200 Sobic007G129401--Sobic010G068200 Sobic007G129401--Sobic009G101600 Sobic005G043400--Sobic002G060500 Sobic005G043400--Sobic009G101600 Sobic005G043400--Sobic009G026400 Sobic005G043400--Sobic004G196500 Sobic005G043400--Sobic007G129401 Sobic005G043400--SobicK010000 Sobic005G085100 Sobic005G085100 Sobic005G043400--Sobic005G085100 Sobic005G142200 Sobic005G142200 Sobic005G043400--Sobic005G142200 Sobic003G201850 Sobic003G201850 Sobic005G043400--Sobic003G201850 Sobic007G131200 Sobic007G131200 Sobic010G143400--Sobic007G131200 Sobic009G197000 Sobic009G197000 Sobic010G143400--Sobic009G197000 Sobic010G143400--Sobic002G128400 Sobic010G143400--Sobic008G013900 Sobic010G143400--Sobic009G162401 Sobic010G270900 Sobic010G270900 Sobic010G143400--Sobic010G270900 Sobic010G143400--Sobic001G246200 Sobic004G315100 Sobic004G315100 Sobic010G143400--Sobic004G315100 Sobic006G099501 Sobic006G099501 Sobic010G143400--Sobic006G099501 Sobic002G128400--Sobic005G085100 Sobic002G128400--Sobic010G143400 Sobic002G128400--Sobic009G162401 Sobic005G148400 Sobic005G148400 Sobic002G128400--Sobic005G148400 Sobic002G128400--Sobic005G043400 Sobic002G128400--Sobic001G246200 Sobic005G148500 Sobic005G148500 Sobic002G128400--Sobic005G148500 Sobic005G221550 Sobic005G221550 Sobic002G128400--Sobic005G221550 Sobic002G212700 Sobic002G212700 Sobic002G128400--Sobic002G212700 Sobic008G013900--Sobic001G164200 Sobic001G182300 Sobic001G182300 Sobic008G013900--Sobic001G182300 Sobic008G124100 Sobic008G124100 Sobic008G013900--Sobic008G124100 Sobic003G219000 Sobic003G219000 Sobic008G013900--Sobic003G219000 Sobic008G013900--Sobic007G129401 Sobic008G049000 Sobic008G049000 Sobic008G013900--Sobic008G049000 Sobic002G094500 Sobic002G094500 Sobic008G013900--Sobic002G094500 Sobic003G176100 Sobic003G176100 Sobic008G013900--Sobic003G176100 Sobic008G013900--Sobic010G143400 Sobic003G258900 Sobic003G258900 Sobic005G059200--Sobic003G258900 Sobic009G145101 Sobic009G145101 Sobic005G059200--Sobic009G145101 Sobic005G059200--Sobic001G246200 Sobic009G251200 Sobic009G251200 Sobic005G059200--Sobic009G251200 Sobic001G081000 Sobic001G081000 Sobic005G059200--Sobic001G081000 Sobic008G101000 Sobic008G101000 Sobic005G059200--Sobic008G101000 Sobic009G221000 Sobic009G221000 Sobic005G059200--Sobic009G221000 Sobic003G189333 Sobic003G189333 Sobic005G059200--Sobic003G189333 Sobic002G223401 Sobic002G223401 Sobic005G059200--Sobic002G223401 Sobic009G162401--Sobic005G085100 Sobic009G162401--Sobic002G128400 Sobic009G162401--Sobic010G143400 Sobic009G162401--Sobic005G148400 Sobic009G162401--Sobic001G246200 Sobic001G271000 Sobic001G271000 Sobic009G162401--Sobic001G271000 Sobic009G162401--Sobic005G148500 Sobic005G170800 Sobic005G170800 Sobic009G162401--Sobic005G170800 Sobic009G162401--Sobic008G013900 Sobic003G222600 Sobic003G222600 Sobic004G070200--Sobic003G222600 Sobic003G030400 Sobic003G030400 Sobic004G070200--Sobic003G030400 Sobic004G070200--Sobic007G131200 Sobic002G172600 Sobic002G172600 Sobic004G070200--Sobic002G172600 Sobic006G110200 Sobic006G110200 Sobic004G070200--Sobic006G110200 Sobic009G137000 Sobic009G137000 Sobic004G070200--Sobic009G137000 Sobic001G114400 Sobic001G114400 Sobic004G070200--Sobic001G114400 Sobic002G191100 Sobic002G191100 Sobic004G070200--Sobic002G191100 Sobic004G070200--Sobic001G246200
Octagon: transcription factors


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