Gene annotation
Transcriptome id Sobic.009G162401.1
Synonym -
Functional annotation -
UniProt A0A1Z5R2Z6
Pfam -
Panther DB PTHR32212 PTHR32212:SF100
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G58310 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os11g09670.1 : OsFBX409 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G085100 - -
2 Sobic.002G128400 WRKY115, expressed -
3 Sobic.010G143400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.005G148400 OsFBX404 - F-box domain containing protein, expressed -
5 Sobic.001G246200 MBTB49 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.001G271000 - -
7 Sobic.005G148500 OsFBX402 - F-box domain containing protein, expressed -
8 Sobic.005G170800 OsFBDUF55 - F-box and DUF domain containing protein, expressed -
9 Sobic.008G013900 O-methyltransferase, putative, expressed -
10 Sobic.006G099600 - -
11 Sobic.006G241200 expressed protein -
12 Sobic.010G270900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
14 Sobic.005G210300 - -
15 Sobic.002G212700 - -
16 Sobic.001G246300 MBTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.005G043400 XRN 5-3 exonuclease N-terminus family protein, expressed -
18 Sobic.009G197000 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
19 Sobic.007G104300 Leucine Rich Repeat family protein, expressed -
20 Sobic.001G164200 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic009G162401 Sobic009G162401 Sobic005G085100 Sobic005G085100 Sobic009G162401--Sobic005G085100 Sobic002G128400 Sobic002G128400 Sobic009G162401--Sobic002G128400 Sobic010G143400 Sobic010G143400 Sobic009G162401--Sobic010G143400 Sobic005G148400 Sobic005G148400 Sobic009G162401--Sobic005G148400 Sobic001G246200 Sobic001G246200 Sobic009G162401--Sobic001G246200 Sobic001G271000 Sobic001G271000 Sobic009G162401--Sobic001G271000 Sobic005G148500 Sobic005G148500 Sobic009G162401--Sobic005G148500 Sobic005G170800 Sobic005G170800 Sobic009G162401--Sobic005G170800 Sobic008G013900 Sobic008G013900 Sobic009G162401--Sobic008G013900 Sobic005G085100--Sobic005G148500 Sobic005G085100--Sobic005G148400 Sobic005G043400 Sobic005G043400 Sobic005G085100--Sobic005G043400 Sobic005G221550 Sobic005G221550 Sobic005G085100--Sobic005G221550 Sobic005G085100--Sobic002G128400 Sobic005G085100--Sobic009G162401 Sobic005G085100--Sobic005G170800 Sobic005G085100--Sobic001G271000 Sobic009G101600 Sobic009G101600 Sobic005G085100--Sobic009G101600 Sobic002G128400--Sobic005G085100 Sobic002G128400--Sobic010G143400 Sobic002G128400--Sobic009G162401 Sobic002G128400--Sobic005G148400 Sobic002G128400--Sobic005G043400 Sobic002G128400--Sobic001G246200 Sobic002G128400--Sobic005G148500 Sobic002G128400--Sobic005G221550 Sobic002G212700 Sobic002G212700 Sobic002G128400--Sobic002G212700 Sobic007G131200 Sobic007G131200 Sobic010G143400--Sobic007G131200 Sobic009G197000 Sobic009G197000 Sobic010G143400--Sobic009G197000 Sobic010G143400--Sobic002G128400 Sobic010G143400--Sobic008G013900 Sobic010G143400--Sobic009G162401 Sobic010G270900 Sobic010G270900 Sobic010G143400--Sobic010G270900 Sobic010G143400--Sobic001G246200 Sobic004G315100 Sobic004G315100 Sobic010G143400--Sobic004G315100 Sobic006G099501 Sobic006G099501 Sobic010G143400--Sobic006G099501 Sobic005G148400--Sobic005G085100 Sobic005G148400--Sobic005G148500 Sobic005G148400--Sobic005G043400 Sobic005G148400--Sobic005G221550 Sobic002G060500 Sobic002G060500 Sobic005G148400--Sobic002G060500 Sobic005G148400--Sobic009G101600 Sobic005G148400--Sobic005G170800 Sobic005G142200 Sobic005G142200 Sobic005G148400--Sobic005G142200 Sobic005G148400--Sobic002G128400 Sobic005G173366 Sobic005G173366 Sobic001G246200--Sobic005G173366 Sobic007G129401 Sobic007G129401 Sobic001G246200--Sobic007G129401 Sobic001G246200--Sobic005G043400 Sobic001G246200--Sobic010G143400 Sobic001G246200--Sobic002G128400 Sobic001G246200--Sobic008G013900 Sobic005G059200 Sobic005G059200 Sobic001G246200--Sobic005G059200 Sobic001G246200--Sobic009G162401 Sobic004G070200 Sobic004G070200 Sobic001G246200--Sobic004G070200 Sobic005G210300 Sobic005G210300 Sobic001G271000--Sobic005G210300 Sobic001G271000--Sobic005G085100 Sobic001G271000--Sobic009G101600 Sobic005G054300 Sobic005G054300 Sobic001G271000--Sobic005G054300 Sobic001G271000--Sobic005G142200 Sobic001G271000--Sobic005G043400 Sobic001G271000--Sobic005G148400 Sobic001G271000--Sobic005G221550 Sobic001G271000--Sobic002G060500 Sobic005G148500--Sobic005G085100 Sobic005G148500--Sobic005G148400 Sobic005G148500--Sobic002G060500 Sobic005G148500--Sobic005G043400 Sobic005G148500--Sobic009G101600 Sobic005G148500--Sobic005G142200 Sobic001G164200 Sobic001G164200 Sobic005G148500--Sobic001G164200 Sobic005G148500--Sobic005G221550 Sobic009G026400 Sobic009G026400 Sobic005G148500--Sobic009G026400 Sobic005G170800--Sobic005G085100 Sobic005G170800--Sobic005G221550 Sobic005G170800--Sobic005G148400 Sobic005G170800--Sobic005G142200 Sobic003G436900 Sobic003G436900 Sobic005G170800--Sobic003G436900 Sobic008G045600 Sobic008G045600 Sobic005G170800--Sobic008G045600 Sobic005G170800--Sobic005G148500 Sobic006G190800 Sobic006G190800 Sobic005G170800--Sobic006G190800 Sobic010G144000 Sobic010G144000 Sobic005G170800--Sobic010G144000 Sobic008G013900--Sobic001G164200 Sobic001G182300 Sobic001G182300 Sobic008G013900--Sobic001G182300 Sobic008G124100 Sobic008G124100 Sobic008G013900--Sobic008G124100 Sobic003G219000 Sobic003G219000 Sobic008G013900--Sobic003G219000 Sobic008G013900--Sobic007G129401 Sobic008G049000 Sobic008G049000 Sobic008G013900--Sobic008G049000 Sobic002G094500 Sobic002G094500 Sobic008G013900--Sobic002G094500 Sobic003G176100 Sobic003G176100 Sobic008G013900--Sobic003G176100 Sobic008G013900--Sobic010G143400
Octagon: transcription factors


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