Gene annotation
Transcriptome id Sobic.006G241200.1
Synonym Sb06g030720
Functional annotation expressed protein
UniProt A0A1Z5RFC0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g55600.1 : expressed protein
MaizeGDB (Corn) Zm00025a057206 , Zm00025a009540
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G270900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.009G159700 expressed protein -
3 Sobic.008G013900 O-methyltransferase, putative, expressed -
4 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
5 Sobic.002G279100 "Syntelog of ZmMYB31, bind to the COMT1, CSE, and 4CL2 promroter region."(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
7 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
8 Sobic.009G162401 - -
9 Sobic.009G197000 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
10 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
11 Sobic.001G164200 cytochrome P450, putative, expressed -
12 Sobic.005G085100 - -
13 Sobic.010G143400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G074300 - -
15 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.001G182300 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.008G124100 - -
18 Sobic.008G185900 RNA recognition motif containing protein, expressed -
19 Sobic.009G064766 - -
20 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase


Gene co-expression network
sample Sobic006G241200 Sobic006G241200 Sobic010G270900 Sobic010G270900 Sobic006G241200--Sobic010G270900 Sobic009G159700 Sobic009G159700 Sobic006G241200--Sobic009G159700 Sobic008G013900 Sobic008G013900 Sobic006G241200--Sobic008G013900 Sobic005G085200 Sobic005G085200 Sobic006G241200--Sobic005G085200 Sobic002G279100 Sobic002G279100 Sobic006G241200--Sobic002G279100 Sobic004G216700 Sobic004G216700 Sobic006G241200--Sobic004G216700 Sobic007G189800 Sobic007G189800 Sobic006G241200--Sobic007G189800 Sobic009G162401 Sobic009G162401 Sobic006G241200--Sobic009G162401 Sobic009G197000 Sobic009G197000 Sobic006G241200--Sobic009G197000 Sobic010G270900--Sobic006G241200 Sobic002G074300 Sobic002G074300 Sobic010G270900--Sobic002G074300 Sobic010G270900--Sobic008G013900 Sobic010G143400 Sobic010G143400 Sobic010G270900--Sobic010G143400 Sobic008G015300 Sobic008G015300 Sobic010G270900--Sobic008G015300 Sobic001G164200 Sobic001G164200 Sobic010G270900--Sobic001G164200 Sobic010G270900--Sobic009G197000 Sobic004G011566 Sobic004G011566 Sobic010G270900--Sobic004G011566 Sobic010G270900--Sobic005G085200 Sobic009G159700--Sobic005G085200 Sobic005G085600 Sobic005G085600 Sobic009G159700--Sobic005G085600 Sobic004G285800 Sobic004G285800 Sobic009G159700--Sobic004G285800 Sobic009G166801 Sobic009G166801 Sobic009G159700--Sobic009G166801 Sobic010G057300 Sobic010G057300 Sobic009G159700--Sobic010G057300 Sobic009G159700--Sobic007G189800 Sobic009G159700--Sobic006G241200 Sobic004G345900 Sobic004G345900 Sobic009G159700--Sobic004G345900 Sobic010G057400 Sobic010G057400 Sobic009G159700--Sobic010G057400 Sobic008G013900--Sobic001G164200 Sobic001G182300 Sobic001G182300 Sobic008G013900--Sobic001G182300 Sobic008G124100 Sobic008G124100 Sobic008G013900--Sobic008G124100 Sobic003G219000 Sobic003G219000 Sobic008G013900--Sobic003G219000 Sobic007G129401 Sobic007G129401 Sobic008G013900--Sobic007G129401 Sobic008G049000 Sobic008G049000 Sobic008G013900--Sobic008G049000 Sobic002G094500 Sobic002G094500 Sobic008G013900--Sobic002G094500 Sobic003G176100 Sobic003G176100 Sobic008G013900--Sobic003G176100 Sobic008G013900--Sobic010G143400 Sobic005G085200--Sobic010G057300 Sobic005G085200--Sobic005G085600 Sobic005G085200--Sobic004G345900 Sobic005G085200--Sobic007G189800 Sobic004G199600 Sobic004G199600 Sobic005G085200--Sobic004G199600 Sobic005G085200--Sobic010G057400 Sobic005G085200--Sobic009G159700 Sobic009G078500 Sobic009G078500 Sobic005G085200--Sobic009G078500 Sobic005G085200--Sobic004G285800 Sobic002G279100--Sobic005G085600 Sobic002G279100--Sobic005G085200 Sobic003G397300 Sobic003G397300 Sobic002G279100--Sobic003G397300 Sobic002G279100--Sobic010G057300 Sobic002G279100--Sobic006G241200 Sobic002G279100--Sobic007G189800 Sobic002G279100--Sobic009G159700 Sobic002G279100--Sobic004G285800 Sobic006G213100 Sobic006G213100 Sobic002G279100--Sobic006G213100 Sobic002G376400 Sobic002G376400 Sobic004G216700--Sobic002G376400 Sobic005G085100 Sobic005G085100 Sobic004G216700--Sobic005G085100 Sobic001G341300 Sobic001G341300 Sobic004G216700--Sobic001G341300 Sobic001G480400 Sobic001G480400 Sobic004G216700--Sobic001G480400 Sobic004G216700--Sobic010G143400 Sobic004G216700--Sobic009G159700 Sobic004G216700--Sobic006G241200 Sobic004G216700--Sobic008G013900 Sobic004G216700--Sobic007G189800 Sobic001G277000 Sobic001G277000 Sobic007G189800--Sobic001G277000 Sobic010G146200 Sobic010G146200 Sobic007G189800--Sobic010G146200 Sobic007G189800--Sobic008G124100 Sobic009G064766 Sobic009G064766 Sobic007G189800--Sobic009G064766 Sobic007G189800--Sobic005G085600 Sobic007G189800--Sobic005G085200 Sobic005G003200 Sobic005G003200 Sobic007G189800--Sobic005G003200 Sobic007G189800--Sobic009G078500 Sobic006G249000 Sobic006G249000 Sobic007G189800--Sobic006G249000 Sobic009G162401--Sobic005G085100 Sobic002G128400 Sobic002G128400 Sobic009G162401--Sobic002G128400 Sobic009G162401--Sobic010G143400 Sobic005G148400 Sobic005G148400 Sobic009G162401--Sobic005G148400 Sobic001G246200 Sobic001G246200 Sobic009G162401--Sobic001G246200 Sobic001G271000 Sobic001G271000 Sobic009G162401--Sobic001G271000 Sobic005G148500 Sobic005G148500 Sobic009G162401--Sobic005G148500 Sobic005G170800 Sobic005G170800 Sobic009G162401--Sobic005G170800 Sobic009G162401--Sobic008G013900 Sobic009G197000--Sobic010G143400 Sobic009G197000--Sobic005G085200 Sobic009G197000--Sobic008G013900 Sobic009G197000--Sobic004G345900 Sobic001G191200 Sobic001G191200 Sobic009G197000--Sobic001G191200 Sobic002G331000 Sobic002G331000 Sobic009G197000--Sobic002G331000 Sobic007G131200 Sobic007G131200 Sobic009G197000--Sobic007G131200 Sobic001G141300 Sobic001G141300 Sobic009G197000--Sobic001G141300 Sobic003G406700 Sobic003G406700 Sobic009G197000--Sobic003G406700
Octagon: transcription factors


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