Gene annotation
Transcriptome id Sobic.010G057400.1
Synonym Sb10g004960, DIN10
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
uncharacterized glycosyltransferase, putative, expressed
UniProt A0A194YHI1
Pfam PF05691
Panther DB PTHR31268 PTHR31268:SF5
NCBI CDD -
KEGG Orthology K06617; raffinose synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G20250 : Raffinose synthase family protein
RAP-DB (Rice) LOC_Os06g07600.1 : uncharacterized glycosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a045384 , Zm00025a042855
Brachypodium KQK20388 , KQK19399 , KQK20387 , KQK02890 , KQK19400
Barley -
Wheat TraesCS3A02G113900 , TraesCS3A02G113900 , TraesCS7A02G134100 , TraesCS7B02G035200 , TraesCS7B02G035200 , TraesCS7D02G133500 , TraesCS7D02G133500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
2 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
3 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
4 Sobic.004G199600 DUF581 domain containing protein, expressed -
5 Sobic.010G270300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@rhodanese-like domain containing protein, putative, expressed -
6 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -
9 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.007G129401 - -
11 Sobic.005G130100 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
12 Sobic.009G180100 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
13 Sobic.008G124100 - -
14 Sobic.002G213800 auxin-repressed protein, putative, expressed -
15 Sobic.008G013900 O-methyltransferase, putative, expressed -
16 Sobic.003G176100 expressed protein -
17 Sobic.009G064766 - -
18 Sobic.002G331000 OsFBX462 - F-box domain containing protein, expressed -
19 Sobic.004G315100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
20 Sobic.003G400266 - -


Gene co-expression network
sample Sobic010G057400 Sobic010G057400 Sobic004G345900 Sobic004G345900 Sobic010G057400--Sobic004G345900 Sobic010G057300 Sobic010G057300 Sobic010G057400--Sobic010G057300 Sobic005G085200 Sobic005G085200 Sobic010G057400--Sobic005G085200 Sobic004G199600 Sobic004G199600 Sobic010G057400--Sobic004G199600 Sobic010G270300 Sobic010G270300 Sobic010G057400--Sobic010G270300 Sobic007G189800 Sobic007G189800 Sobic010G057400--Sobic007G189800 Sobic001G277000 Sobic001G277000 Sobic010G057400--Sobic001G277000 Sobic010G146200 Sobic010G146200 Sobic010G057400--Sobic010G146200 Sobic009G078500 Sobic009G078500 Sobic010G057400--Sobic009G078500 Sobic004G345900--Sobic010G057400 Sobic004G345900--Sobic005G085200 Sobic004G345900--Sobic010G057300 Sobic004G345900--Sobic001G277000 Sobic004G345900--Sobic007G189800 Sobic004G345900--Sobic004G199600 Sobic002G213800 Sobic002G213800 Sobic004G345900--Sobic002G213800 Sobic004G345900--Sobic010G270300 Sobic004G345900--Sobic010G146200 Sobic010G057300--Sobic005G085200 Sobic004G285800 Sobic004G285800 Sobic010G057300--Sobic004G285800 Sobic010G057300--Sobic004G345900 Sobic010G057300--Sobic010G057400 Sobic010G057300--Sobic004G199600 Sobic009G180100 Sobic009G180100 Sobic010G057300--Sobic009G180100 Sobic010G057300--Sobic010G270300 Sobic005G085600 Sobic005G085600 Sobic010G057300--Sobic005G085600 Sobic010G057300--Sobic007G189800 Sobic005G085200--Sobic010G057300 Sobic005G085200--Sobic005G085600 Sobic005G085200--Sobic004G345900 Sobic005G085200--Sobic007G189800 Sobic005G085200--Sobic004G199600 Sobic005G085200--Sobic010G057400 Sobic009G159700 Sobic009G159700 Sobic005G085200--Sobic009G159700 Sobic005G085200--Sobic009G078500 Sobic005G085200--Sobic004G285800 Sobic004G199600--Sobic009G078500 Sobic009G109450 Sobic009G109450 Sobic004G199600--Sobic009G109450 Sobic009G180200 Sobic009G180200 Sobic004G199600--Sobic009G180200 Sobic005G130100 Sobic005G130100 Sobic004G199600--Sobic005G130100 Sobic009G231300 Sobic009G231300 Sobic004G199600--Sobic009G231300 Sobic004G199600--Sobic010G146200 Sobic001G363100 Sobic001G363100 Sobic004G199600--Sobic001G363100 Sobic005G121800 Sobic005G121800 Sobic004G199600--Sobic005G121800 Sobic004G199600--Sobic007G189800 Sobic010G270300--Sobic005G130100 Sobic009G064766 Sobic009G064766 Sobic010G270300--Sobic009G064766 Sobic010G270300--Sobic009G078500 Sobic010G270300--Sobic010G057300 Sobic010G270300--Sobic004G199600 Sobic010G270300--Sobic010G057400 Sobic010G270300--Sobic004G345900 Sobic010G270300--Sobic005G085200 Sobic010G270300--Sobic010G146200 Sobic007G189800--Sobic001G277000 Sobic007G189800--Sobic010G146200 Sobic008G124100 Sobic008G124100 Sobic007G189800--Sobic008G124100 Sobic007G189800--Sobic009G064766 Sobic007G189800--Sobic005G085600 Sobic007G189800--Sobic005G085200 Sobic005G003200 Sobic005G003200 Sobic007G189800--Sobic005G003200 Sobic007G189800--Sobic009G078500 Sobic006G249000 Sobic006G249000 Sobic007G189800--Sobic006G249000 Sobic001G277000--Sobic008G124100 Sobic001G277000--Sobic007G189800 Sobic001G277000--Sobic009G064766 Sobic001G277000--Sobic004G345900 Sobic001G277000--Sobic009G078500 Sobic001G277000--Sobic002G213800 Sobic001G277000--Sobic004G199600 Sobic001G277000--Sobic005G085200 Sobic001G277000--Sobic010G146200 Sobic003G176100 Sobic003G176100 Sobic010G146200--Sobic003G176100 Sobic009G113600 Sobic009G113600 Sobic010G146200--Sobic009G113600 Sobic010G050600 Sobic010G050600 Sobic010G146200--Sobic010G050600 Sobic010G146200--Sobic005G130100 Sobic007G059300 Sobic007G059300 Sobic010G146200--Sobic007G059300 Sobic002G051400 Sobic002G051400 Sobic010G146200--Sobic002G051400 SobicK024000 SobicK024000 Sobic010G146200--SobicK024000 Sobic010G146200--Sobic009G078500 Sobic010G146200--Sobic007G189800 Sobic009G078500--Sobic004G199600 Sobic009G078500--Sobic005G130100 Sobic009G078500--Sobic009G109450 Sobic009G078500--Sobic009G180200 Sobic009G078500--Sobic009G231300 Sobic009G078500--Sobic010G146200 Sobic009G078500--Sobic001G363100 Sobic009G078500--Sobic009G064766 Sobic009G078500--Sobic003G176100
Octagon: transcription factors


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