Gene annotation
Transcriptome id Sobic.002G212700.1
Synonym
Functional annotation -
UniProt A0A1B6QCP4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G128400 WRKY115, expressed -
2 Sobic.005G085100 - -
3 Sobic.001G271000 - -
4 Sobic.009G162401 - -
5 Sobic.001G355400 40S ribosomal protein S9-2, putative, expressed K02997: RP-S9e, small subunit ribosomal protein S9e
6 Sobic.007G104300 Leucine Rich Repeat family protein, expressed -
7 Sobic.001G246300 MBTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.005G148400 OsFBX404 - F-box domain containing protein, expressed -
9 Sobic.006G099600 - -
10 Sobic.005G043400 XRN 5-3 exonuclease N-terminus family protein, expressed -
11 Sobic.005G210300 - -
12 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
13 Sobic.001G181900 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
14 Sobic.009G101600 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
15 Sobic.005G221550 - -
16 Sobic.005G148500 OsFBX402 - F-box domain containing protein, expressed -
17 Sobic.010G143400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G480400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.002G060500 OsFBX237 - F-box domain containing protein, expressed -
20 Sobic.001G246200 MBTB49 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic002G212700 Sobic002G212700 Sobic002G128400 Sobic002G128400 Sobic002G212700--Sobic002G128400 Sobic005G085100 Sobic005G085100 Sobic002G212700--Sobic005G085100 Sobic001G271000 Sobic001G271000 Sobic002G212700--Sobic001G271000 Sobic009G162401 Sobic009G162401 Sobic002G212700--Sobic009G162401 Sobic001G355400 Sobic001G355400 Sobic002G212700--Sobic001G355400 Sobic007G104300 Sobic007G104300 Sobic002G212700--Sobic007G104300 Sobic001G246300 Sobic001G246300 Sobic002G212700--Sobic001G246300 Sobic005G148400 Sobic005G148400 Sobic002G212700--Sobic005G148400 Sobic006G099600 Sobic006G099600 Sobic002G212700--Sobic006G099600 Sobic002G128400--Sobic005G085100 Sobic010G143400 Sobic010G143400 Sobic002G128400--Sobic010G143400 Sobic002G128400--Sobic009G162401 Sobic002G128400--Sobic005G148400 Sobic005G043400 Sobic005G043400 Sobic002G128400--Sobic005G043400 Sobic001G246200 Sobic001G246200 Sobic002G128400--Sobic001G246200 Sobic005G148500 Sobic005G148500 Sobic002G128400--Sobic005G148500 Sobic005G221550 Sobic005G221550 Sobic002G128400--Sobic005G221550 Sobic002G128400--Sobic002G212700 Sobic005G085100--Sobic005G148500 Sobic005G085100--Sobic005G148400 Sobic005G085100--Sobic005G043400 Sobic005G085100--Sobic005G221550 Sobic005G085100--Sobic002G128400 Sobic005G085100--Sobic009G162401 Sobic005G170800 Sobic005G170800 Sobic005G085100--Sobic005G170800 Sobic005G085100--Sobic001G271000 Sobic009G101600 Sobic009G101600 Sobic005G085100--Sobic009G101600 Sobic005G210300 Sobic005G210300 Sobic001G271000--Sobic005G210300 Sobic001G271000--Sobic005G085100 Sobic001G271000--Sobic009G101600 Sobic005G054300 Sobic005G054300 Sobic001G271000--Sobic005G054300 Sobic005G142200 Sobic005G142200 Sobic001G271000--Sobic005G142200 Sobic001G271000--Sobic005G043400 Sobic001G271000--Sobic005G148400 Sobic001G271000--Sobic005G221550 Sobic002G060500 Sobic002G060500 Sobic001G271000--Sobic002G060500 Sobic009G162401--Sobic005G085100 Sobic009G162401--Sobic002G128400 Sobic009G162401--Sobic010G143400 Sobic009G162401--Sobic005G148400 Sobic009G162401--Sobic001G246200 Sobic009G162401--Sobic001G271000 Sobic009G162401--Sobic005G148500 Sobic009G162401--Sobic005G170800 Sobic008G013900 Sobic008G013900 Sobic009G162401--Sobic008G013900 Sobic008G106400 Sobic008G106400 Sobic001G355400--Sobic008G106400 Sobic008G045600 Sobic008G045600 Sobic001G355400--Sobic008G045600 Sobic001G355400--Sobic005G221550 Sobic002G431200 Sobic002G431200 Sobic001G355400--Sobic002G431200 Sobic001G355400--Sobic005G043400 Sobic004G152601 Sobic004G152601 Sobic001G355400--Sobic004G152601 Sobic001G355400--Sobic001G271000 Sobic001G355400--Sobic009G101600 Sobic001G355400--Sobic005G085100 Sobic004G166301 Sobic004G166301 Sobic007G104300--Sobic004G166301 Sobic008G167100 Sobic008G167100 Sobic007G104300--Sobic008G167100 Sobic002G144025 Sobic002G144025 Sobic007G104300--Sobic002G144025 Sobic001G181900 Sobic001G181900 Sobic007G104300--Sobic001G181900 Sobic002G023400 Sobic002G023400 Sobic007G104300--Sobic002G023400 Sobic007G104300--Sobic005G148400 Sobic008G049000 Sobic008G049000 Sobic007G104300--Sobic008G049000 Sobic007G104300--Sobic008G013900 Sobic007G104300--Sobic002G128400 Sobic002G212601 Sobic002G212601 Sobic001G246300--Sobic002G212601 Sobic005G145950 Sobic005G145950 Sobic001G246300--Sobic005G145950 Sobic001G246300--Sobic009G162401 Sobic001G246300--Sobic002G128400 Sobic004G291600 Sobic004G291600 Sobic001G246300--Sobic004G291600 Sobic001G246300--Sobic006G099600 Sobic002G065800 Sobic002G065800 Sobic001G246300--Sobic002G065800 Sobic001G246300--Sobic002G212700 Sobic006G235650 Sobic006G235650 Sobic001G246300--Sobic006G235650 Sobic005G148400--Sobic005G085100 Sobic005G148400--Sobic005G148500 Sobic005G148400--Sobic005G043400 Sobic005G148400--Sobic005G221550 Sobic005G148400--Sobic002G060500 Sobic005G148400--Sobic009G101600 Sobic005G148400--Sobic005G170800 Sobic005G148400--Sobic005G142200 Sobic005G148400--Sobic002G128400 Sobic006G099600--Sobic002G128400 Sobic006G099600--Sobic009G162401 Sobic006G099600--Sobic001G271000 Sobic006G099600--Sobic005G085100 Sobic006G099600--Sobic005G148400 Sobic006G099600--Sobic005G043400 Sobic006G099501 Sobic006G099501 Sobic006G099600--Sobic006G099501 Sobic006G099600--Sobic010G143400 Sobic006G099600--Sobic005G221550
Octagon: transcription factors


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