Gene annotation
Transcriptome id Sobic.009G101600.2,Sobic.009G101600.1
Synonym ULP1B
Functional annotation ulp1 protease family, C-terminal catalytic domain containing protein, expressed
UniProt A0A1Z5R212 , A0A1B6Q152 , A0A1Z5R2V9
Pfam PF02902
Panther DB PTHR12606 PTHR12606:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT4G00690 : UB-like protease 1B
RAP-DB (Rice) LOC_Os10g24954.1 : ulp1 protease family, C-terminal catalytic domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G142200 expressed protein -
2 Sobic.009G026400 - -
3 Sobic.002G060500 OsFBX237 - F-box domain containing protein, expressed -
4 Sobic.K010000 RNA recognition motif containing protein, putative, expressed -
5 Sobic.004G200866 - -
6 Sobic.005G054300 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
7 Sobic.004G196500 hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.005G043400 XRN 5-3 exonuclease N-terminus family protein, expressed -
9 Sobic.005G054600 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
10 Sobic.001G305400 metallothionein family protein, expressed -
11 Sobic.005G061100 - -
12 Sobic.003G436900 OsFBX178 - F-box domain containing protein, expressed -
13 Sobic.004G121000 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
14 Sobic.002G221200 zinc knuckle domain containing protein, expressed -
15 Sobic.007G129401 - -
16 Sobic.003G366850 - -
17 Sobic.005G054000 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
18 Sobic.008G142000 expressed protein -
19 Sobic.002G062300 expressed protein -
20 Sobic.007G059300 - -


Gene co-expression network
sample Sobic009G101600 Sobic009G101600 Sobic005G142200 Sobic005G142200 Sobic009G101600--Sobic005G142200 Sobic009G026400 Sobic009G026400 Sobic009G101600--Sobic009G026400 Sobic002G060500 Sobic002G060500 Sobic009G101600--Sobic002G060500 SobicK010000 SobicK010000 Sobic009G101600--SobicK010000 Sobic004G200866 Sobic004G200866 Sobic009G101600--Sobic004G200866 Sobic005G054300 Sobic005G054300 Sobic009G101600--Sobic005G054300 Sobic004G196500 Sobic004G196500 Sobic009G101600--Sobic004G196500 Sobic005G043400 Sobic005G043400 Sobic009G101600--Sobic005G043400 Sobic005G054600 Sobic005G054600 Sobic009G101600--Sobic005G054600 Sobic005G142200--Sobic009G101600 Sobic004G121000 Sobic004G121000 Sobic005G142200--Sobic004G121000 Sobic003G436900 Sobic003G436900 Sobic005G142200--Sobic003G436900 Sobic005G142200--Sobic002G060500 Sobic005G142200--Sobic004G200866 Sobic005G142200--Sobic009G026400 Sobic001G305400 Sobic001G305400 Sobic005G142200--Sobic001G305400 Sobic002G221200 Sobic002G221200 Sobic005G142200--Sobic002G221200 Sobic005G142200--SobicK010000 Sobic009G026400--Sobic002G060500 Sobic009G026400--Sobic009G101600 Sobic007G059300 Sobic007G059300 Sobic009G026400--Sobic007G059300 Sobic002G062300 Sobic002G062300 Sobic009G026400--Sobic002G062300 Sobic009G026400--Sobic004G196500 Sobic009G113600 Sobic009G113600 Sobic009G026400--Sobic009G113600 Sobic009G026400--Sobic005G054600 Sobic009G026400--Sobic005G142200 Sobic009G026400--Sobic005G054300 Sobic002G060500--Sobic009G026400 Sobic002G060500--Sobic009G101600 Sobic002G060500--Sobic005G142200 Sobic002G060500--SobicK010000 Sobic002G060500--Sobic004G196500 Sobic002G060500--Sobic001G305400 Sobic002G060500--Sobic002G221200 Sobic002G060500--Sobic005G043400 Sobic002G060500--Sobic007G059300 SobicK010000--Sobic004G200866 SobicK010000--Sobic009G101600 SobicK010000--Sobic002G060500 SobicK010000--Sobic005G142200 SobicK010000--Sobic009G026400 Sobic008G142000 Sobic008G142000 SobicK010000--Sobic008G142000 SobicK010000--Sobic005G043400 SobicK010000--Sobic004G196500 SobicK010000--Sobic001G305400 Sobic004G200866--SobicK010000 Sobic004G200866--Sobic005G142200 Sobic004G200866--Sobic009G101600 Sobic004G200866--Sobic004G121000 Sobic004G200866--Sobic001G305400 Sobic004G200866--Sobic008G142000 Sobic004G200866--Sobic002G060500 Sobic004G200866--Sobic002G221200 Sobic001G261480 Sobic001G261480 Sobic004G200866--Sobic001G261480 Sobic005G054300--Sobic005G054600 Sobic005G054000 Sobic005G054000 Sobic005G054300--Sobic005G054000 Sobic005G054300--Sobic009G026400 Sobic005G054300--Sobic009G101600 Sobic005G054300--Sobic005G142200 Sobic005G054300--Sobic002G062300 Sobic005G212600 Sobic005G212600 Sobic005G054300--Sobic005G212600 Sobic005G054300--Sobic001G305400 Sobic005G054300--Sobic002G221200 Sobic004G196500--Sobic009G026400 Sobic004G196500--Sobic002G060500 Sobic004G196500--Sobic009G101600 Sobic007G129401 Sobic007G129401 Sobic004G196500--Sobic007G129401 Sobic004G196500--Sobic005G043400 Sobic004G196500--Sobic005G142200 Sobic004G196500--SobicK010000 Sobic010G068200 Sobic010G068200 Sobic004G196500--Sobic010G068200 Sobic004G196500--Sobic001G305400 Sobic005G043400--Sobic002G060500 Sobic005G043400--Sobic009G101600 Sobic005G043400--Sobic009G026400 Sobic005G043400--Sobic004G196500 Sobic005G043400--Sobic007G129401 Sobic005G043400--SobicK010000 Sobic005G085100 Sobic005G085100 Sobic005G043400--Sobic005G085100 Sobic005G043400--Sobic005G142200 Sobic003G201850 Sobic003G201850 Sobic005G043400--Sobic003G201850 Sobic005G054600--Sobic005G054300 Sobic005G054600--Sobic005G054000 Sobic005G054600--Sobic009G026400 Sobic005G054600--Sobic001G305400 Sobic005G054600--Sobic002G062300 Sobic005G054600--Sobic009G101600 Sobic005G054600--Sobic002G221200 Sobic005G054600--Sobic005G142200 Sobic005G054600--Sobic002G060500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.