Gene annotation
Transcriptome id Sobic.008G142000.1
Synonym Sb08g019270
Functional annotation expressed protein
UniProt A0A1B6PDM8
Pfam PF07762
Panther DB PTHR33086 PTHR33086:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g21600.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT66893
Barley -
Wheat TraesCS7B02G402000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G200866 - -
2 Sobic.001G305400 metallothionein family protein, expressed -
3 Sobic.002G221200 zinc knuckle domain containing protein, expressed -
4 Sobic.007G059300 - -
5 Sobic.003G031750 - -
6 Sobic.005G142200 expressed protein -
7 Sobic.K010000 RNA recognition motif containing protein, putative, expressed -
8 Sobic.002G060500 OsFBX237 - F-box domain containing protein, expressed -
9 Sobic.001G261480 - K01489: cdd, cytidine deaminase
10 Sobic.K024000 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
11 Sobic.001G240400 ENT domain containing protein, expressed -
12 Sobic.009G026400 - -
13 Sobic.009G209800 OsFBX49 - F-box domain containing protein, expressed -
14 Sobic.004G121000 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
15 Sobic.002G062300 expressed protein -
16 Sobic.009G101600 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
17 Sobic.009G113600 - -
18 Sobic.002G056100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Leucine Rich Repeat family protein, expressed -
19 Sobic.008G091900 - -
20 Sobic.004G196500 hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic008G142000 Sobic008G142000 Sobic004G200866 Sobic004G200866 Sobic008G142000--Sobic004G200866 Sobic001G305400 Sobic001G305400 Sobic008G142000--Sobic001G305400 Sobic002G221200 Sobic002G221200 Sobic008G142000--Sobic002G221200 Sobic007G059300 Sobic007G059300 Sobic008G142000--Sobic007G059300 Sobic003G031750 Sobic003G031750 Sobic008G142000--Sobic003G031750 Sobic005G142200 Sobic005G142200 Sobic008G142000--Sobic005G142200 SobicK010000 SobicK010000 Sobic008G142000--SobicK010000 Sobic002G060500 Sobic002G060500 Sobic008G142000--Sobic002G060500 Sobic001G261480 Sobic001G261480 Sobic008G142000--Sobic001G261480 Sobic004G200866--SobicK010000 Sobic004G200866--Sobic005G142200 Sobic009G101600 Sobic009G101600 Sobic004G200866--Sobic009G101600 Sobic004G121000 Sobic004G121000 Sobic004G200866--Sobic004G121000 Sobic004G200866--Sobic001G305400 Sobic004G200866--Sobic008G142000 Sobic004G200866--Sobic002G060500 Sobic004G200866--Sobic002G221200 Sobic004G200866--Sobic001G261480 Sobic001G305400--Sobic002G221200 Sobic008G091900 Sobic008G091900 Sobic001G305400--Sobic008G091900 Sobic001G240400 Sobic001G240400 Sobic001G305400--Sobic001G240400 Sobic005G117801 Sobic005G117801 Sobic001G305400--Sobic005G117801 Sobic002G056100 Sobic002G056100 Sobic001G305400--Sobic002G056100 Sobic009G209800 Sobic009G209800 Sobic001G305400--Sobic009G209800 Sobic001G305400--Sobic005G142200 Sobic001G305400--Sobic002G060500 Sobic001G305400--Sobic001G261480 Sobic002G221200--Sobic001G305400 Sobic002G221200--Sobic008G091900 Sobic002G221200--Sobic001G240400 Sobic002G221200--Sobic005G117801 Sobic001G253100 Sobic001G253100 Sobic002G221200--Sobic001G253100 Sobic002G221200--Sobic009G209800 Sobic008G036500 Sobic008G036500 Sobic002G221200--Sobic008G036500 Sobic002G062300 Sobic002G062300 Sobic002G221200--Sobic002G062300 Sobic002G221200--Sobic003G031750 Sobic007G059300--Sobic002G062300 Sobic009G113600 Sobic009G113600 Sobic007G059300--Sobic009G113600 Sobic009G196700 Sobic009G196700 Sobic007G059300--Sobic009G196700 Sobic007G059300--Sobic003G031750 SobicK024000 SobicK024000 Sobic007G059300--SobicK024000 Sobic008G108900 Sobic008G108900 Sobic007G059300--Sobic008G108900 Sobic009G026400 Sobic009G026400 Sobic007G059300--Sobic009G026400 Sobic006G132200 Sobic006G132200 Sobic007G059300--Sobic006G132200 Sobic002G051400 Sobic002G051400 Sobic007G059300--Sobic002G051400 Sobic003G031750--Sobic002G062300 Sobic003G031750--Sobic007G059300 Sobic003G031750--Sobic008G091900 Sobic003G031750--Sobic009G113600 Sobic003G031750--SobicK024000 Sobic003G031750--Sobic002G221200 Sobic003G031750--Sobic009G196700 Sobic003G031750--Sobic001G253100 Sobic008G079100 Sobic008G079100 Sobic003G031750--Sobic008G079100 Sobic005G142200--Sobic009G101600 Sobic005G142200--Sobic004G121000 Sobic003G436900 Sobic003G436900 Sobic005G142200--Sobic003G436900 Sobic005G142200--Sobic002G060500 Sobic005G142200--Sobic004G200866 Sobic005G142200--Sobic009G026400 Sobic005G142200--Sobic001G305400 Sobic005G142200--Sobic002G221200 Sobic005G142200--SobicK010000 SobicK010000--Sobic004G200866 SobicK010000--Sobic009G101600 SobicK010000--Sobic002G060500 SobicK010000--Sobic005G142200 SobicK010000--Sobic009G026400 SobicK010000--Sobic008G142000 Sobic005G043400 Sobic005G043400 SobicK010000--Sobic005G043400 Sobic004G196500 Sobic004G196500 SobicK010000--Sobic004G196500 SobicK010000--Sobic001G305400 Sobic002G060500--Sobic009G026400 Sobic002G060500--Sobic009G101600 Sobic002G060500--Sobic005G142200 Sobic002G060500--SobicK010000 Sobic002G060500--Sobic004G196500 Sobic002G060500--Sobic001G305400 Sobic002G060500--Sobic002G221200 Sobic002G060500--Sobic005G043400 Sobic002G060500--Sobic007G059300 Sobic001G261480--Sobic001G305400 Sobic001G261480--Sobic002G221200 Sobic001G261480--Sobic001G240400 Sobic001G261480--Sobic004G121000 Sobic001G261480--Sobic004G200866 Sobic003G366850 Sobic003G366850 Sobic001G261480--Sobic003G366850 Sobic001G261480--Sobic005G117801 Sobic001G261480--Sobic009G209800 Sobic001G261480--Sobic003G031750
Octagon: transcription factors


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