Gene annotation
Transcriptome id Sobic.005G142200.1
Synonym Sb05g020750
Functional annotation expressed protein
UniProt A0A1B6PSF8
Pfam PF14303
Panther DB PTHR11260 PTHR11260:SF313
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47680 : DNA binding
RAP-DB (Rice) LOC_Os11g14160.1 : transposon protein, putative, Pong sub-class, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G101600 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
2 Sobic.004G121000 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
3 Sobic.003G436900 OsFBX178 - F-box domain containing protein, expressed -
4 Sobic.002G060500 OsFBX237 - F-box domain containing protein, expressed -
5 Sobic.004G200866 - -
6 Sobic.009G026400 - -
7 Sobic.001G305400 metallothionein family protein, expressed -
8 Sobic.002G221200 zinc knuckle domain containing protein, expressed -
9 Sobic.K010000 RNA recognition motif containing protein, putative, expressed -
10 Sobic.005G054300 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
11 Sobic.010G144000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
12 Sobic.001G240400 ENT domain containing protein, expressed -
13 Sobic.005G054600 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
14 Sobic.008G142000 expressed protein -
15 Sobic.005G061100 - -
16 Sobic.008G045600 OsFBX230 - F-box domain containing protein, expressed -
17 Sobic.004G196500 hydrolase, alpha/beta fold family domain containing protein, expressed -
18 Sobic.002G062300 expressed protein -
19 Sobic.001G261480 - K01489: cdd, cytidine deaminase
20 Sobic.007G059300 - -


Gene co-expression network
sample Sobic005G142200 Sobic005G142200 Sobic009G101600 Sobic009G101600 Sobic005G142200--Sobic009G101600 Sobic004G121000 Sobic004G121000 Sobic005G142200--Sobic004G121000 Sobic003G436900 Sobic003G436900 Sobic005G142200--Sobic003G436900 Sobic002G060500 Sobic002G060500 Sobic005G142200--Sobic002G060500 Sobic004G200866 Sobic004G200866 Sobic005G142200--Sobic004G200866 Sobic009G026400 Sobic009G026400 Sobic005G142200--Sobic009G026400 Sobic001G305400 Sobic001G305400 Sobic005G142200--Sobic001G305400 Sobic002G221200 Sobic002G221200 Sobic005G142200--Sobic002G221200 SobicK010000 SobicK010000 Sobic005G142200--SobicK010000 Sobic009G101600--Sobic005G142200 Sobic009G101600--Sobic009G026400 Sobic009G101600--Sobic002G060500 Sobic009G101600--SobicK010000 Sobic009G101600--Sobic004G200866 Sobic005G054300 Sobic005G054300 Sobic009G101600--Sobic005G054300 Sobic004G196500 Sobic004G196500 Sobic009G101600--Sobic004G196500 Sobic005G043400 Sobic005G043400 Sobic009G101600--Sobic005G043400 Sobic005G054600 Sobic005G054600 Sobic009G101600--Sobic005G054600 Sobic004G121000--Sobic005G142200 Sobic004G121000--Sobic003G436900 Sobic001G240400 Sobic001G240400 Sobic004G121000--Sobic001G240400 Sobic002G224450 Sobic002G224450 Sobic004G121000--Sobic002G224450 Sobic004G121000--Sobic004G200866 Sobic004G121000--Sobic001G305400 Sobic005G221425 Sobic005G221425 Sobic004G121000--Sobic005G221425 Sobic004G317600 Sobic004G317600 Sobic004G121000--Sobic004G317600 Sobic004G121000--Sobic002G221200 Sobic003G436900--Sobic005G142200 Sobic003G436900--Sobic004G121000 Sobic003G436900--Sobic001G240400 Sobic010G144000 Sobic010G144000 Sobic003G436900--Sobic010G144000 Sobic005G061100 Sobic005G061100 Sobic003G436900--Sobic005G061100 Sobic003G436900--Sobic002G221200 Sobic003G436900--Sobic001G305400 Sobic003G436900--Sobic009G101600 Sobic003G436900--Sobic004G317600 Sobic002G060500--Sobic009G026400 Sobic002G060500--Sobic009G101600 Sobic002G060500--Sobic005G142200 Sobic002G060500--SobicK010000 Sobic002G060500--Sobic004G196500 Sobic002G060500--Sobic001G305400 Sobic002G060500--Sobic002G221200 Sobic002G060500--Sobic005G043400 Sobic007G059300 Sobic007G059300 Sobic002G060500--Sobic007G059300 Sobic004G200866--SobicK010000 Sobic004G200866--Sobic005G142200 Sobic004G200866--Sobic009G101600 Sobic004G200866--Sobic004G121000 Sobic004G200866--Sobic001G305400 Sobic008G142000 Sobic008G142000 Sobic004G200866--Sobic008G142000 Sobic004G200866--Sobic002G060500 Sobic004G200866--Sobic002G221200 Sobic001G261480 Sobic001G261480 Sobic004G200866--Sobic001G261480 Sobic009G026400--Sobic002G060500 Sobic009G026400--Sobic009G101600 Sobic009G026400--Sobic007G059300 Sobic002G062300 Sobic002G062300 Sobic009G026400--Sobic002G062300 Sobic009G026400--Sobic004G196500 Sobic009G113600 Sobic009G113600 Sobic009G026400--Sobic009G113600 Sobic009G026400--Sobic005G054600 Sobic009G026400--Sobic005G142200 Sobic009G026400--Sobic005G054300 Sobic001G305400--Sobic002G221200 Sobic008G091900 Sobic008G091900 Sobic001G305400--Sobic008G091900 Sobic001G305400--Sobic001G240400 Sobic005G117801 Sobic005G117801 Sobic001G305400--Sobic005G117801 Sobic002G056100 Sobic002G056100 Sobic001G305400--Sobic002G056100 Sobic009G209800 Sobic009G209800 Sobic001G305400--Sobic009G209800 Sobic001G305400--Sobic005G142200 Sobic001G305400--Sobic002G060500 Sobic001G305400--Sobic001G261480 Sobic002G221200--Sobic001G305400 Sobic002G221200--Sobic008G091900 Sobic002G221200--Sobic001G240400 Sobic002G221200--Sobic005G117801 Sobic001G253100 Sobic001G253100 Sobic002G221200--Sobic001G253100 Sobic002G221200--Sobic009G209800 Sobic008G036500 Sobic008G036500 Sobic002G221200--Sobic008G036500 Sobic002G221200--Sobic002G062300 Sobic003G031750 Sobic003G031750 Sobic002G221200--Sobic003G031750 SobicK010000--Sobic004G200866 SobicK010000--Sobic009G101600 SobicK010000--Sobic002G060500 SobicK010000--Sobic005G142200 SobicK010000--Sobic009G026400 SobicK010000--Sobic008G142000 SobicK010000--Sobic005G043400 SobicK010000--Sobic004G196500 SobicK010000--Sobic001G305400
Octagon: transcription factors


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