Gene annotation
Transcriptome id Sobic.003G068400.1
Synonym Sb03g005820
Functional annotation receptor kinase, putative, expressed
UniProt C5XPW8
Pfam PF07714
Panther DB PTHR27000 PTHR27000:SF187
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47090 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os01g05870.1 : receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a035651
Brachypodium KQK02274
Barley -
Wheat TraesCS1B02G004700 , TraesCS7A02G432300 , TraesCS6B02G003800 , TraesCS3A02G043500 , TraesCS6B02G089100 , TraesCS3B02G588300 , TraesCS6A02G004100 , TraesCSU02G118000 , TraesCS4B02G360600 , TraesCS4B02G360600 , TraesCS6D02G000900 , TraesCS4A02G379800
Populus PNT09441


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G246200 MBTB49 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
2 Sobic.008G189900 NB-ARC domain containing protein, expressed -
3 Sobic.007G131200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G222600 similar to DEAD-box ATP-dependent RNA helicase 25(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
5 Sobic.003G068500 receptor kinase, putative, expressed -
6 Sobic.002G146400 - -
7 Sobic.001G537700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K13179: DDX18, ATP-dependent RNA helicase DDX18/HAS1
8 Sobic.005G059200 bromodomain domain containing protein, expressed -
9 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
10 Sobic.003G068600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
11 Sobic.001G538800 dual specificity protein phosphatase, putative, expressed -
12 Sobic.004G231600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G243650 - K00784: ribonuclease Z
14 Sobic.001G114400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoribosylformylglycinamidine synthase, putative, expressed K01952: PFAS, phosphoribosylformylglycinamidine synthase
15 Sobic.008G148400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein DSP1, putative, expressed -
16 Sobic.009G085400 acyl-activating enzyme 14, putative, expressed -
17 Sobic.002G172600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional protein folD, putative, expressed -
18 Sobic.005G110475 - -
19 Sobic.005G173366 - -
20 Sobic.003G030400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA binding protein, putative, expressed K11145: ribonuclease III family protein


Gene co-expression network
sample Sobic003G068400 Sobic003G068400 Sobic001G246200 Sobic001G246200 Sobic003G068400--Sobic001G246200 Sobic008G189900 Sobic008G189900 Sobic003G068400--Sobic008G189900 Sobic007G131200 Sobic007G131200 Sobic003G068400--Sobic007G131200 Sobic003G222600 Sobic003G222600 Sobic003G068400--Sobic003G222600 Sobic003G068500 Sobic003G068500 Sobic003G068400--Sobic003G068500 Sobic002G146400 Sobic002G146400 Sobic003G068400--Sobic002G146400 Sobic001G537700 Sobic001G537700 Sobic003G068400--Sobic001G537700 Sobic005G059200 Sobic005G059200 Sobic003G068400--Sobic005G059200 Sobic004G070200 Sobic004G070200 Sobic003G068400--Sobic004G070200 Sobic005G173366 Sobic005G173366 Sobic001G246200--Sobic005G173366 Sobic007G129401 Sobic007G129401 Sobic001G246200--Sobic007G129401 Sobic005G043400 Sobic005G043400 Sobic001G246200--Sobic005G043400 Sobic010G143400 Sobic010G143400 Sobic001G246200--Sobic010G143400 Sobic002G128400 Sobic002G128400 Sobic001G246200--Sobic002G128400 Sobic008G013900 Sobic008G013900 Sobic001G246200--Sobic008G013900 Sobic001G246200--Sobic005G059200 Sobic009G162401 Sobic009G162401 Sobic001G246200--Sobic009G162401 Sobic001G246200--Sobic004G070200 Sobic004G231600 Sobic004G231600 Sobic008G189900--Sobic004G231600 Sobic006G089400 Sobic006G089400 Sobic008G189900--Sobic006G089400 Sobic010G016600 Sobic010G016600 Sobic008G189900--Sobic010G016600 Sobic010G143500 Sobic010G143500 Sobic008G189900--Sobic010G143500 Sobic004G296000 Sobic004G296000 Sobic008G189900--Sobic004G296000 Sobic001G207200 Sobic001G207200 Sobic008G189900--Sobic001G207200 Sobic006G083300 Sobic006G083300 Sobic008G189900--Sobic006G083300 Sobic008G189900--Sobic003G068400 Sobic003G358900 Sobic003G358900 Sobic008G189900--Sobic003G358900 Sobic007G131200--Sobic010G143400 Sobic008G148400 Sobic008G148400 Sobic007G131200--Sobic008G148400 Sobic007G131200--Sobic004G070200 Sobic003G030400 Sobic003G030400 Sobic007G131200--Sobic003G030400 Sobic009G197000 Sobic009G197000 Sobic007G131200--Sobic009G197000 Sobic007G131200--Sobic003G222600 Sobic006G265400 Sobic006G265400 Sobic007G131200--Sobic006G265400 Sobic001G426400 Sobic001G426400 Sobic007G131200--Sobic001G426400 Sobic003G406700 Sobic003G406700 Sobic007G131200--Sobic003G406700 Sobic003G222600--Sobic003G030400 Sobic003G222600--Sobic008G148400 Sobic001G114400 Sobic001G114400 Sobic003G222600--Sobic001G114400 Sobic010G258300 Sobic010G258300 Sobic003G222600--Sobic010G258300 Sobic003G222600--Sobic004G070200 Sobic009G137000 Sobic009G137000 Sobic003G222600--Sobic009G137000 Sobic007G205600 Sobic007G205600 Sobic003G222600--Sobic007G205600 Sobic009G233800 Sobic009G233800 Sobic003G222600--Sobic009G233800 Sobic009G036300 Sobic009G036300 Sobic003G222600--Sobic009G036300 Sobic002G131000 Sobic002G131000 Sobic003G068500--Sobic002G131000 Sobic001G252101 Sobic001G252101 Sobic003G068500--Sobic001G252101 Sobic007G090409 Sobic007G090409 Sobic003G068500--Sobic007G090409 Sobic006G276100 Sobic006G276100 Sobic003G068500--Sobic006G276100 Sobic007G043100 Sobic007G043100 Sobic003G068500--Sobic007G043100 Sobic006G025600 Sobic006G025600 Sobic003G068500--Sobic006G025600 Sobic003G068500--Sobic003G068400 Sobic002G044700 Sobic002G044700 Sobic003G068500--Sobic002G044700 Sobic003G068500--Sobic008G189900 Sobic003G324100 Sobic003G324100 Sobic002G146400--Sobic003G324100 Sobic001G422500 Sobic001G422500 Sobic002G146400--Sobic001G422500 Sobic003G332900 Sobic003G332900 Sobic002G146400--Sobic003G332900 Sobic001G362300 Sobic001G362300 Sobic002G146400--Sobic001G362300 Sobic005G100900 Sobic005G100900 Sobic002G146400--Sobic005G100900 Sobic001G485600 Sobic001G485600 Sobic002G146400--Sobic001G485600 Sobic002G262100 Sobic002G262100 Sobic002G146400--Sobic002G262100 Sobic008G165900 Sobic008G165900 Sobic002G146400--Sobic008G165900 Sobic001G322600 Sobic001G322600 Sobic002G146400--Sobic001G322600 Sobic003G039300 Sobic003G039300 Sobic001G537700--Sobic003G039300 Sobic001G076200 Sobic001G076200 Sobic001G537700--Sobic001G076200 Sobic006G110200 Sobic006G110200 Sobic001G537700--Sobic006G110200 Sobic001G537700--Sobic007G205600 Sobic007G069400 Sobic007G069400 Sobic001G537700--Sobic007G069400 Sobic001G388400 Sobic001G388400 Sobic001G537700--Sobic001G388400 Sobic001G537700--Sobic009G233800 Sobic010G028000 Sobic010G028000 Sobic001G537700--Sobic010G028000 Sobic002G114700 Sobic002G114700 Sobic001G537700--Sobic002G114700 Sobic003G258900 Sobic003G258900 Sobic005G059200--Sobic003G258900 Sobic009G145101 Sobic009G145101 Sobic005G059200--Sobic009G145101 Sobic005G059200--Sobic001G246200 Sobic009G251200 Sobic009G251200 Sobic005G059200--Sobic009G251200 Sobic001G081000 Sobic001G081000 Sobic005G059200--Sobic001G081000 Sobic008G101000 Sobic008G101000 Sobic005G059200--Sobic008G101000 Sobic009G221000 Sobic009G221000 Sobic005G059200--Sobic009G221000 Sobic003G189333 Sobic003G189333 Sobic005G059200--Sobic003G189333 Sobic002G223401 Sobic002G223401 Sobic005G059200--Sobic002G223401 Sobic004G070200--Sobic003G222600 Sobic004G070200--Sobic003G030400 Sobic004G070200--Sobic007G131200 Sobic002G172600 Sobic002G172600 Sobic004G070200--Sobic002G172600 Sobic004G070200--Sobic006G110200 Sobic004G070200--Sobic009G137000 Sobic004G070200--Sobic001G114400 Sobic002G191100 Sobic002G191100 Sobic004G070200--Sobic002G191100 Sobic004G070200--Sobic001G246200
Octagon: transcription factors


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