Gene annotation
Transcriptome id Sobic.002G146400.1
Synonym
Functional annotation -
UniProt A0A1B6QBB6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G324100 haloacid dehalogenase, putative, expressed K01094: phosphatidylglycerophosphatase GEP4
2 Sobic.001G422500 N-dimethylguanosine tRNA methyltransferase, putative, expressed K00555: TRMT1, tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase
3 Sobic.003G332900 expressed protein K14404: CPSF4, cleavage and polyadenylation specificity factor subunit 4
4 Sobic.001G362300 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12900: FUS-interacting serine-arginine-rich protein 1
5 Sobic.005G100900 DAG protein, chloroplast precursor, putative, expressed -
6 Sobic.001G485600 DAG protein, chloroplast precursor, putative, expressed -
7 Sobic.002G262100 - K13181: DDX27, ATP-dependent RNA helicase DDX27
8 Sobic.008G165900 similar to DEAD-box ATP-dependent RNA helicase 9(PubMedID : 29862293)@- -
9 Sobic.001G322600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G119600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
11 Sobic.008G056900 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
12 Sobic.002G399200 - K14779: DDX52, ATP-dependent RNA helicase DDX52/ROK1
13 Sobic.002G378100 DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
14 Sobic.009G145101 - -
15 Sobic.006G231800 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
16 Sobic.002G191100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
17 Sobic.005G110475 - -
18 Sobic.003G407600 Mak16 protein domain containing protein, expressed K14831: protein MAK16
19 Sobic.004G087600 RNA recognition motif containing protein, putative, expressed -
20 Sobic.003G138600 expressed protein -


Gene co-expression network
sample Sobic002G146400 Sobic002G146400 Sobic003G324100 Sobic003G324100 Sobic002G146400--Sobic003G324100 Sobic001G422500 Sobic001G422500 Sobic002G146400--Sobic001G422500 Sobic003G332900 Sobic003G332900 Sobic002G146400--Sobic003G332900 Sobic001G362300 Sobic001G362300 Sobic002G146400--Sobic001G362300 Sobic005G100900 Sobic005G100900 Sobic002G146400--Sobic005G100900 Sobic001G485600 Sobic001G485600 Sobic002G146400--Sobic001G485600 Sobic002G262100 Sobic002G262100 Sobic002G146400--Sobic002G262100 Sobic008G165900 Sobic008G165900 Sobic002G146400--Sobic008G165900 Sobic001G322600 Sobic001G322600 Sobic002G146400--Sobic001G322600 Sobic003G324100--Sobic001G485600 Sobic009G103600 Sobic009G103600 Sobic003G324100--Sobic009G103600 Sobic003G324100--Sobic002G146400 Sobic001G114400 Sobic001G114400 Sobic003G324100--Sobic001G114400 Sobic001G429300 Sobic001G429300 Sobic003G324100--Sobic001G429300 Sobic002G191100 Sobic002G191100 Sobic003G324100--Sobic002G191100 Sobic003G245900 Sobic003G245900 Sobic003G324100--Sobic003G245900 Sobic001G069600 Sobic001G069600 Sobic003G324100--Sobic001G069600 Sobic004G087600 Sobic004G087600 Sobic003G324100--Sobic004G087600 Sobic004G036700 Sobic004G036700 Sobic001G422500--Sobic004G036700 Sobic008G163500 Sobic008G163500 Sobic001G422500--Sobic008G163500 Sobic002G378100 Sobic002G378100 Sobic001G422500--Sobic002G378100 Sobic006G231800 Sobic006G231800 Sobic001G422500--Sobic006G231800 Sobic010G083900 Sobic010G083900 Sobic001G422500--Sobic010G083900 Sobic001G422500--Sobic002G262100 Sobic009G101200 Sobic009G101200 Sobic001G422500--Sobic009G101200 Sobic006G198600 Sobic006G198600 Sobic001G422500--Sobic006G198600 Sobic003G123200 Sobic003G123200 Sobic001G422500--Sobic003G123200 Sobic003G332900--Sobic008G165900 Sobic010G211500 Sobic010G211500 Sobic003G332900--Sobic010G211500 Sobic004G231600 Sobic004G231600 Sobic003G332900--Sobic004G231600 Sobic001G207200 Sobic001G207200 Sobic003G332900--Sobic001G207200 Sobic008G022701 Sobic008G022701 Sobic003G332900--Sobic008G022701 Sobic002G131000 Sobic002G131000 Sobic003G332900--Sobic002G131000 Sobic001G224200 Sobic001G224200 Sobic003G332900--Sobic001G224200 Sobic009G238100 Sobic009G238100 Sobic003G332900--Sobic009G238100 Sobic006G128400 Sobic006G128400 Sobic003G332900--Sobic006G128400 Sobic006G272200 Sobic006G272200 Sobic001G362300--Sobic006G272200 Sobic001G362300--Sobic001G485600 Sobic001G362300--Sobic004G087600 Sobic002G238000 Sobic002G238000 Sobic001G362300--Sobic002G238000 Sobic001G362300--Sobic008G165900 Sobic001G362300--Sobic005G100900 Sobic003G123000 Sobic003G123000 Sobic001G362300--Sobic003G123000 Sobic002G399200 Sobic002G399200 Sobic001G362300--Sobic002G399200 Sobic001G362300--Sobic002G146400 Sobic005G100900--Sobic002G238000 Sobic009G071700 Sobic009G071700 Sobic005G100900--Sobic009G071700 Sobic007G114000 Sobic007G114000 Sobic005G100900--Sobic007G114000 Sobic003G425100 Sobic003G425100 Sobic005G100900--Sobic003G425100 Sobic001G119600 Sobic001G119600 Sobic005G100900--Sobic001G119600 Sobic005G100900--Sobic002G262100 Sobic004G173100 Sobic004G173100 Sobic005G100900--Sobic004G173100 Sobic005G100900--Sobic001G485600 Sobic005G100900--Sobic008G165900 Sobic008G056900 Sobic008G056900 Sobic001G485600--Sobic008G056900 Sobic009G096100 Sobic009G096100 Sobic001G485600--Sobic009G096100 Sobic001G485600--Sobic003G324100 Sobic001G485600--Sobic003G245900 Sobic001G485600--Sobic001G362300 Sobic008G081600 Sobic008G081600 Sobic001G485600--Sobic008G081600 Sobic001G485600--Sobic005G100900 Sobic003G174800 Sobic003G174800 Sobic001G485600--Sobic003G174800 Sobic007G197400 Sobic007G197400 Sobic001G485600--Sobic007G197400 Sobic002G262100--Sobic001G119600 Sobic002G262100--Sobic002G399200 Sobic002G262100--Sobic002G378100 Sobic002G262100--Sobic008G163500 Sobic002G262100--Sobic001G422500 Sobic001G157300 Sobic001G157300 Sobic002G262100--Sobic001G157300 Sobic002G262100--Sobic004G173100 Sobic002G262100--Sobic003G425100 Sobic002G262100--Sobic006G198600 Sobic008G165900--Sobic001G224200 Sobic008G165900--Sobic003G332900 Sobic008G165900--Sobic002G238000 Sobic008G165900--Sobic006G128400 Sobic007G075800 Sobic007G075800 Sobic008G165900--Sobic007G075800 Sobic008G165900--Sobic001G207200 Sobic010G100800 Sobic010G100800 Sobic008G165900--Sobic010G100800 Sobic001G501300 Sobic001G501300 Sobic008G165900--Sobic001G501300 Sobic002G031700 Sobic002G031700 Sobic008G165900--Sobic002G031700 Sobic001G322600--Sobic010G083900 Sobic009G163600 Sobic009G163600 Sobic001G322600--Sobic009G163600 Sobic002G344500 Sobic002G344500 Sobic001G322600--Sobic002G344500 Sobic003G014700 Sobic003G014700 Sobic001G322600--Sobic003G014700 Sobic004G354000 Sobic004G354000 Sobic001G322600--Sobic004G354000 Sobic010G224700 Sobic010G224700 Sobic001G322600--Sobic010G224700 Sobic003G407600 Sobic003G407600 Sobic001G322600--Sobic003G407600 Sobic005G028300 Sobic005G028300 Sobic001G322600--Sobic005G028300 Sobic001G322600--Sobic002G378100
Octagon: transcription factors


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