Gene annotation
Transcriptome id Sobic.003G324100.2,Sobic.003G324100.1
Synonym Sb03g037050
Functional annotation haloacid dehalogenase, putative, expressed
UniProt A0A1B6Q6L5 , A0A1B6Q6J9
Pfam PF09419
Panther DB PTHR19288 PTHR19288:SF25
NCBI CDD KOG2961; Predicted hydrolase (HAD superfamily)
KEGG Orthology K01094; phosphatidylglycerophosphatase GEP4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58830 : haloacid dehalogenase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os01g58390.1 : haloacid dehalogenase, putative, expressed
MaizeGDB (Corn) Zm00025a027217
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G485600 DAG protein, chloroplast precursor, putative, expressed -
2 Sobic.009G103600 MEE12, putative, expressed -
3 Sobic.002G146400 - -
4 Sobic.001G114400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoribosylformylglycinamidine synthase, putative, expressed K01952: PFAS, phosphoribosylformylglycinamidine synthase
5 Sobic.001G429300 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
6 Sobic.002G191100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
7 Sobic.003G245900 membrane associated DUF588 domain containing protein, putative, expressed -
8 Sobic.001G069600 ad-003, putative, expressed K16219: NTMT1, METTL11A, protein N-terminal methyltransferase
9 Sobic.004G087600 RNA recognition motif containing protein, putative, expressed -
10 Sobic.004G019500 pentatricopeptide, putative, expressed -
11 Sobic.009G214200 phosphoribosylamine--glycine ligase, putative, expressed K01945: phosphoribosylamine---glycine ligase
12 Sobic.001G321400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB2, putative, expressed -
13 Sobic.005G012700 expressed protein -
14 Sobic.002G336800 PPR repeat domain containing protein, putative, expressed -
15 Sobic.008G068601 - -
16 Sobic.003G030400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA binding protein, putative, expressed K11145: ribonuclease III family protein
17 Sobic.001G532700 WD repeat-containing protein 44, putative, expressed -
18 Sobic.001G202500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
19 Sobic.001G362300 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12900: FUS-interacting serine-arginine-rich protein 1
20 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic003G324100 Sobic003G324100 Sobic001G485600 Sobic001G485600 Sobic003G324100--Sobic001G485600 Sobic009G103600 Sobic009G103600 Sobic003G324100--Sobic009G103600 Sobic002G146400 Sobic002G146400 Sobic003G324100--Sobic002G146400 Sobic001G114400 Sobic001G114400 Sobic003G324100--Sobic001G114400 Sobic001G429300 Sobic001G429300 Sobic003G324100--Sobic001G429300 Sobic002G191100 Sobic002G191100 Sobic003G324100--Sobic002G191100 Sobic003G245900 Sobic003G245900 Sobic003G324100--Sobic003G245900 Sobic001G069600 Sobic001G069600 Sobic003G324100--Sobic001G069600 Sobic004G087600 Sobic004G087600 Sobic003G324100--Sobic004G087600 Sobic008G056900 Sobic008G056900 Sobic001G485600--Sobic008G056900 Sobic009G096100 Sobic009G096100 Sobic001G485600--Sobic009G096100 Sobic001G485600--Sobic003G324100 Sobic001G485600--Sobic003G245900 Sobic001G362300 Sobic001G362300 Sobic001G485600--Sobic001G362300 Sobic008G081600 Sobic008G081600 Sobic001G485600--Sobic008G081600 Sobic005G100900 Sobic005G100900 Sobic001G485600--Sobic005G100900 Sobic003G174800 Sobic003G174800 Sobic001G485600--Sobic003G174800 Sobic007G197400 Sobic007G197400 Sobic001G485600--Sobic007G197400 Sobic009G214200 Sobic009G214200 Sobic009G103600--Sobic009G214200 Sobic003G109700 Sobic003G109700 Sobic009G103600--Sobic003G109700 Sobic006G032900 Sobic006G032900 Sobic009G103600--Sobic006G032900 Sobic002G336800 Sobic002G336800 Sobic009G103600--Sobic002G336800 Sobic005G110475 Sobic005G110475 Sobic009G103600--Sobic005G110475 Sobic003G144950 Sobic003G144950 Sobic009G103600--Sobic003G144950 Sobic004G019500 Sobic004G019500 Sobic009G103600--Sobic004G019500 Sobic009G103600--Sobic003G324100 Sobic009G215800 Sobic009G215800 Sobic009G103600--Sobic009G215800 Sobic002G146400--Sobic003G324100 Sobic001G422500 Sobic001G422500 Sobic002G146400--Sobic001G422500 Sobic003G332900 Sobic003G332900 Sobic002G146400--Sobic003G332900 Sobic002G146400--Sobic001G362300 Sobic002G146400--Sobic005G100900 Sobic002G146400--Sobic001G485600 Sobic002G262100 Sobic002G262100 Sobic002G146400--Sobic002G262100 Sobic008G165900 Sobic008G165900 Sobic002G146400--Sobic008G165900 Sobic001G322600 Sobic001G322600 Sobic002G146400--Sobic001G322600 Sobic003G222600 Sobic003G222600 Sobic001G114400--Sobic003G222600 Sobic001G114400--Sobic002G191100 Sobic003G030400 Sobic003G030400 Sobic001G114400--Sobic003G030400 Sobic009G036300 Sobic009G036300 Sobic001G114400--Sobic009G036300 Sobic004G070200 Sobic004G070200 Sobic001G114400--Sobic004G070200 Sobic008G148400 Sobic008G148400 Sobic001G114400--Sobic008G148400 Sobic010G039200 Sobic010G039200 Sobic001G114400--Sobic010G039200 Sobic001G114400--Sobic003G324100 Sobic010G211500 Sobic010G211500 Sobic001G114400--Sobic010G211500 Sobic010G268300 Sobic010G268300 Sobic001G429300--Sobic010G268300 Sobic010G280100 Sobic010G280100 Sobic001G429300--Sobic010G280100 Sobic006G273200 Sobic006G273200 Sobic001G429300--Sobic006G273200 Sobic002G122600 Sobic002G122600 Sobic001G429300--Sobic002G122600 Sobic004G083700 Sobic004G083700 Sobic001G429300--Sobic004G083700 Sobic008G165700 Sobic008G165700 Sobic001G429300--Sobic008G165700 Sobic003G018900 Sobic003G018900 Sobic001G429300--Sobic003G018900 Sobic006G171700 Sobic006G171700 Sobic001G429300--Sobic006G171700 Sobic001G281600 Sobic001G281600 Sobic001G429300--Sobic001G281600 Sobic002G191100--Sobic001G114400 Sobic002G181132 Sobic002G181132 Sobic002G191100--Sobic002G181132 Sobic003G162800 Sobic003G162800 Sobic002G191100--Sobic003G162800 Sobic008G038600 Sobic008G038600 Sobic002G191100--Sobic008G038600 Sobic003G039300 Sobic003G039300 Sobic002G191100--Sobic003G039300 Sobic003G345900 Sobic003G345900 Sobic002G191100--Sobic003G345900 Sobic007G137800 Sobic007G137800 Sobic002G191100--Sobic007G137800 Sobic002G191100--Sobic009G214200 Sobic002G191100--Sobic004G070200 Sobic003G245900--Sobic001G485600 Sobic003G245900--Sobic001G429300 Sobic003G245900--Sobic003G324100 Sobic009G112400 Sobic009G112400 Sobic003G245900--Sobic009G112400 Sobic003G245900--Sobic010G268300 Sobic003G245900--Sobic002G122600 Sobic008G068601 Sobic008G068601 Sobic003G245900--Sobic008G068601 Sobic003G245900--Sobic003G174800 Sobic006G038400 Sobic006G038400 Sobic003G245900--Sobic006G038400 Sobic004G086700 Sobic004G086700 Sobic001G069600--Sobic004G086700 Sobic002G404200 Sobic002G404200 Sobic001G069600--Sobic002G404200 Sobic010G265300 Sobic010G265300 Sobic001G069600--Sobic010G265300 Sobic002G083900 Sobic002G083900 Sobic001G069600--Sobic002G083900 Sobic001G043800 Sobic001G043800 Sobic001G069600--Sobic001G043800 Sobic001G069600--Sobic003G324100 Sobic008G193300 Sobic008G193300 Sobic001G069600--Sobic008G193300 Sobic004G265900 Sobic004G265900 Sobic001G069600--Sobic004G265900 Sobic001G069600--Sobic001G429300 Sobic008G011100 Sobic008G011100 Sobic004G087600--Sobic008G011100 Sobic004G018300 Sobic004G018300 Sobic004G087600--Sobic004G018300 Sobic005G106500 Sobic005G106500 Sobic004G087600--Sobic005G106500 Sobic002G031400 Sobic002G031400 Sobic004G087600--Sobic002G031400 Sobic002G309800 Sobic002G309800 Sobic004G087600--Sobic002G309800 Sobic003G133900 Sobic003G133900 Sobic004G087600--Sobic003G133900 Sobic004G087600--Sobic001G281600 Sobic001G124000 Sobic001G124000 Sobic004G087600--Sobic001G124000 Sobic001G360900 Sobic001G360900 Sobic004G087600--Sobic001G360900
Octagon: transcription factors


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