Gene annotation
Transcriptome id Sobic.002G317300.1,Sobic.002G317300.2
Synonym CPK9, Sb02g034640
Functional annotation CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1B6QEG5 , A0A1B6QEG7
Pfam PF13499 PF00069 PF00036 PF00069
Panther DB PTHR24349 PTHR24349:SF89
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0005509; calcium ion binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G20410 : calmodulin-domain protein kinase 9
RAP-DB (Rice) LOC_Os07g33110.3,LOC_Os07g33110.4 : CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a014772 , Zm00025a039723 , Zm00025a048212 , Zm00025a056693 , Zm00025a010059
Brachypodium KQK16018 , KQK16017 , KQK16016 , KQJ84217
Barley HORVU1Hr1G070840.3 , HORVU1Hr1G070840.4 , HORVU3Hr1G087600.1 , HORVU2Hr1G046660.10 , HORVU2Hr1G046660.11 , HORVU2Hr1G046660.12 , HORVU2Hr1G046660.13 , HORVU1Hr1G070840.2 , HORVU1Hr1G070840.1 , HORVU3Hr1G087600.7 , HORVU3Hr1G087600.2 , HORVU3Hr1G087600.3 , HORVU3Hr1G087600.8 , HORVU5Hr1G110900.5 , HORVU5Hr1G110900.1 , HORVU5Hr1G110900.2 , HORVU5Hr1G110900.3 , HORVU2Hr1G046660.8 , HORVU2Hr1G046660.9 , HORVU2Hr1G046660.2 , HORVU2Hr1G046660.3 , HORVU2Hr1G046660.1 , HORVU2Hr1G046660.6 , HORVU2Hr1G046660.7 , HORVU2Hr1G046660.4 , HORVU2Hr1G046660.5
Wheat TraesCS3A02G351300 , TraesCS1D02G290700 , TraesCS1A02G292200 , TraesCS1A02G292200 , TraesCS1B02G301600 , TraesCS2D02G456400 , TraesCS5D02G475900 , TraesCS5D02G475900 , TraesCS3D02G345500 , TraesCS2A02G223100 , TraesCS2A02G223100 , TraesCS2A02G223100 , TraesCS2D02G229100 , TraesCS2D02G229100 , TraesCS2D02G229100 , TraesCS5A02G463100 , TraesCS2A02G456100 , TraesCS2B02G478100 , TraesCS2B02G248700 , TraesCS2B02G248700 , TraesCS2B02G248700 , TraesCS5B02G474500 , TraesCS3B02G383800
Populus -


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cDNA sequences
Sobic.002G317300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G199200 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
2 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.010G146600 cyclin-dependent kinase F-1, putative, expressed -
4 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
5 Sobic.006G032900 endonuclease/exonuclease/phosphatase family protein, putative, expressed -
6 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
7 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
8 Sobic.007G067700 RNA recognition motif containing protein, putative, expressed -
9 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
10 Sobic.009G050900 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
11 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
12 Sobic.001G201500 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
13 Sobic.001G275900 calcium-transporting ATPase, plasma membrane-type, putative, expressed -
14 Sobic.001G057200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
15 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.008G004400 GIL1, putative, expressed -
17 Sobic.006G280600 tubulin folding cofactor B, putative, expressed K17262: TBCB, CKAP1, tubulin-specific chaperone B
18 Sobic.002G204900 ZOS9-06 - C2H2 zinc finger protein, expressed -
19 Sobic.010G085200 mediator of RNA polymerase II transcription subunit 6, putative, expressed K15128: mediator of RNA polymerase II transcription subunit 6
20 Sobic.001G201400 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1


Gene co-expression network
sample Sobic002G317300 Sobic002G317300 Sobic009G199200 Sobic009G199200 Sobic002G317300--Sobic009G199200 Sobic010G249300 Sobic010G249300 Sobic002G317300--Sobic010G249300 Sobic010G146600 Sobic010G146600 Sobic002G317300--Sobic010G146600 Sobic001G281600 Sobic001G281600 Sobic002G317300--Sobic001G281600 Sobic006G032900 Sobic006G032900 Sobic002G317300--Sobic006G032900 Sobic002G166300 Sobic002G166300 Sobic002G317300--Sobic002G166300 Sobic008G083000 Sobic008G083000 Sobic002G317300--Sobic008G083000 Sobic007G067700 Sobic007G067700 Sobic002G317300--Sobic007G067700 Sobic010G279700 Sobic010G279700 Sobic002G317300--Sobic010G279700 Sobic001G000200 Sobic001G000200 Sobic009G199200--Sobic001G000200 Sobic003G233600 Sobic003G233600 Sobic009G199200--Sobic003G233600 Sobic008G004600 Sobic008G004600 Sobic009G199200--Sobic008G004600 Sobic009G199200--Sobic002G317300 Sobic010G205800 Sobic010G205800 Sobic009G199200--Sobic010G205800 Sobic001G186800 Sobic001G186800 Sobic009G199200--Sobic001G186800 Sobic009G199200--Sobic001G281600 Sobic009G199200--Sobic002G166300 Sobic002G260900 Sobic002G260900 Sobic009G199200--Sobic002G260900 Sobic004G185600 Sobic004G185600 Sobic010G249300--Sobic004G185600 Sobic010G249300--Sobic010G146600 Sobic010G249300--Sobic002G317300 Sobic010G249300--Sobic008G083000 Sobic001G291100 Sobic001G291100 Sobic010G249300--Sobic001G291100 Sobic010G249300--Sobic001G281600 Sobic006G047100 Sobic006G047100 Sobic010G249300--Sobic006G047100 Sobic001G464100 Sobic001G464100 Sobic010G249300--Sobic001G464100 Sobic009G050900 Sobic009G050900 Sobic010G249300--Sobic009G050900 Sobic010G146600--Sobic010G249300 Sobic003G119400 Sobic003G119400 Sobic010G146600--Sobic003G119400 Sobic010G146600--Sobic004G185600 Sobic003G250500 Sobic003G250500 Sobic010G146600--Sobic003G250500 Sobic010G146600--Sobic002G317300 Sobic010G146600--Sobic001G291100 Sobic010G146600--Sobic001G281600 Sobic009G133400 Sobic009G133400 Sobic010G146600--Sobic009G133400 Sobic010G251100 Sobic010G251100 Sobic010G146600--Sobic010G251100 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic001G362200 Sobic001G362200 Sobic006G032900--Sobic001G362200 Sobic003G109700 Sobic003G109700 Sobic006G032900--Sobic003G109700 Sobic001G518400 Sobic001G518400 Sobic006G032900--Sobic001G518400 Sobic006G032900--Sobic002G317300 Sobic001G226700 Sobic001G226700 Sobic006G032900--Sobic001G226700 Sobic006G032900--Sobic008G083000 Sobic006G032900--Sobic003G401100 Sobic001G102700 Sobic001G102700 Sobic006G032900--Sobic001G102700 Sobic009G103600 Sobic009G103600 Sobic006G032900--Sobic009G103600 Sobic003G273600 Sobic003G273600 Sobic002G166300--Sobic003G273600 Sobic002G166300--Sobic003G233600 Sobic009G139900 Sobic009G139900 Sobic002G166300--Sobic009G139900 Sobic004G296400 Sobic004G296400 Sobic002G166300--Sobic004G296400 Sobic001G079200 Sobic001G079200 Sobic002G166300--Sobic001G079200 Sobic002G166300--Sobic009G199200 Sobic002G166300--Sobic008G004600 Sobic002G166300--Sobic001G000200 Sobic004G136300 Sobic004G136300 Sobic002G166300--Sobic004G136300 Sobic005G084100 Sobic005G084100 Sobic008G083000--Sobic005G084100 Sobic008G083000--Sobic010G279700 Sobic008G131000 Sobic008G131000 Sobic008G083000--Sobic008G131000 Sobic008G083000--Sobic001G281600 Sobic008G083000--Sobic009G050900 Sobic008G083000--Sobic003G401100 Sobic008G011100 Sobic008G011100 Sobic008G083000--Sobic008G011100 Sobic004G018300 Sobic004G018300 Sobic008G083000--Sobic004G018300 Sobic007G000800 Sobic007G000800 Sobic008G083000--Sobic007G000800 Sobic007G067700--Sobic002G317300 Sobic001G259000 Sobic001G259000 Sobic007G067700--Sobic001G259000 Sobic002G204900 Sobic002G204900 Sobic007G067700--Sobic002G204900 Sobic004G092500 Sobic004G092500 Sobic007G067700--Sobic004G092500 Sobic001G145400 Sobic001G145400 Sobic007G067700--Sobic001G145400 Sobic005G172500 Sobic005G172500 Sobic007G067700--Sobic005G172500 Sobic001G120500 Sobic001G120500 Sobic007G067700--Sobic001G120500 Sobic006G136400 Sobic006G136400 Sobic007G067700--Sobic006G136400 Sobic007G067700--Sobic002G260900 Sobic010G279700--Sobic001G281600 Sobic010G279700--Sobic008G083000 Sobic010G279700--Sobic003G401100 Sobic001G094900 Sobic001G094900 Sobic010G279700--Sobic001G094900 Sobic007G191700 Sobic007G191700 Sobic010G279700--Sobic007G191700 Sobic005G106500 Sobic005G106500 Sobic010G279700--Sobic005G106500 Sobic008G092300 Sobic008G092300 Sobic010G279700--Sobic008G092300 Sobic007G203200 Sobic007G203200 Sobic010G279700--Sobic007G203200 Sobic004G021200 Sobic004G021200 Sobic010G279700--Sobic004G021200
Octagon: transcription factors


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