Gene annotation
Transcriptome id Sobic.006G032900.1
Synonym Sb06g003360
Functional annotation endonuclease/exonuclease/phosphatase family protein, putative, expressed
UniProt C5YDA4
Pfam PF03372
Panther DB PTHR12121 PTHR12121:SF36
NCBI CDD KOG0620; Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30900 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os05g19974.2 : endonuclease/exonuclease/phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a011989 , Zm00025a055702
Brachypodium KQK21507 , KQK21506
Barley -
Wheat TraesCS1B02G153200 , TraesCS1B02G153200 , TraesCS1A02G138000 , TraesCS1A02G138000 , TraesCS1A02G138000
Populus -


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cDNA sequences
Sobic.006G032900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
2 Sobic.003G109700 expressed protein -
3 Sobic.001G518400 EF hand family protein, putative, expressed -
4 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
5 Sobic.001G226700 WD repeat-containing protein, putative, expressed -
6 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
7 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
8 Sobic.001G102700 metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed K01404: leishmanolysin
9 Sobic.009G103600 MEE12, putative, expressed -
10 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
11 Sobic.002G260900 protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
12 Sobic.006G044000 - -
13 Sobic.004G192200 choline transporter-related, putative, expressed -
14 Sobic.009G050900 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
15 Sobic.009G238850 - -
16 Sobic.007G027700 expressed protein -
17 Sobic.003G196900 esterase/lipase/thioesterase, putative, expressed K06889: uncharacterized protein
18 Sobic.008G080200 leucine-rich repeat family protein, putative, expressed -
19 Sobic.001G267900 - -
20 Sobic.003G126600 rab GDP dissociation inhibitor alpha, putative, expressed -


Gene co-expression network
sample Sobic006G032900 Sobic006G032900 Sobic001G362200 Sobic001G362200 Sobic006G032900--Sobic001G362200 Sobic003G109700 Sobic003G109700 Sobic006G032900--Sobic003G109700 Sobic001G518400 Sobic001G518400 Sobic006G032900--Sobic001G518400 Sobic002G317300 Sobic002G317300 Sobic006G032900--Sobic002G317300 Sobic001G226700 Sobic001G226700 Sobic006G032900--Sobic001G226700 Sobic008G083000 Sobic008G083000 Sobic006G032900--Sobic008G083000 Sobic003G401100 Sobic003G401100 Sobic006G032900--Sobic003G401100 Sobic001G102700 Sobic001G102700 Sobic006G032900--Sobic001G102700 Sobic009G103600 Sobic009G103600 Sobic006G032900--Sobic009G103600 Sobic003G332500 Sobic003G332500 Sobic001G362200--Sobic003G332500 Sobic001G362200--Sobic003G109700 Sobic001G362200--Sobic006G032900 Sobic001G362200--Sobic001G102700 Sobic001G515000 Sobic001G515000 Sobic001G362200--Sobic001G515000 Sobic004G192200 Sobic004G192200 Sobic001G362200--Sobic004G192200 Sobic004G072100 Sobic004G072100 Sobic001G362200--Sobic004G072100 Sobic002G134600 Sobic002G134600 Sobic001G362200--Sobic002G134600 Sobic007G183900 Sobic007G183900 Sobic001G362200--Sobic007G183900 Sobic003G109700--Sobic001G362200 Sobic010G056000 Sobic010G056000 Sobic003G109700--Sobic010G056000 Sobic003G109700--Sobic006G032900 Sobic008G125501 Sobic008G125501 Sobic003G109700--Sobic008G125501 Sobic003G372800 Sobic003G372800 Sobic003G109700--Sobic003G372800 Sobic010G028800 Sobic010G028800 Sobic003G109700--Sobic010G028800 Sobic001G222250 Sobic001G222250 Sobic003G109700--Sobic001G222250 Sobic001G267900 Sobic001G267900 Sobic003G109700--Sobic001G267900 Sobic003G109700--Sobic009G103600 Sobic001G170100 Sobic001G170100 Sobic001G518400--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic001G518400--Sobic006G138000 Sobic001G335900 Sobic001G335900 Sobic001G518400--Sobic001G335900 Sobic001G078100 Sobic001G078100 Sobic001G518400--Sobic001G078100 Sobic009G229600 Sobic009G229600 Sobic001G518400--Sobic009G229600 Sobic010G275500 Sobic010G275500 Sobic001G518400--Sobic010G275500 Sobic006G202200 Sobic006G202200 Sobic001G518400--Sobic006G202200 Sobic003G126600 Sobic003G126600 Sobic001G518400--Sobic003G126600 Sobic001G369000 Sobic001G369000 Sobic001G518400--Sobic001G369000 Sobic009G199200 Sobic009G199200 Sobic002G317300--Sobic009G199200 Sobic010G249300 Sobic010G249300 Sobic002G317300--Sobic010G249300 Sobic010G146600 Sobic010G146600 Sobic002G317300--Sobic010G146600 Sobic001G281600 Sobic001G281600 Sobic002G317300--Sobic001G281600 Sobic002G317300--Sobic006G032900 Sobic002G166300 Sobic002G166300 Sobic002G317300--Sobic002G166300 Sobic002G317300--Sobic008G083000 Sobic007G067700 Sobic007G067700 Sobic002G317300--Sobic007G067700 Sobic010G279700 Sobic010G279700 Sobic002G317300--Sobic010G279700 Sobic002G294800 Sobic002G294800 Sobic001G226700--Sobic002G294800 Sobic001G226700--Sobic002G134600 Sobic010G265300 Sobic010G265300 Sobic001G226700--Sobic010G265300 Sobic001G226700--Sobic001G362200 Sobic008G046500 Sobic008G046500 Sobic001G226700--Sobic008G046500 Sobic007G165900 Sobic007G165900 Sobic001G226700--Sobic007G165900 Sobic004G246900 Sobic004G246900 Sobic001G226700--Sobic004G246900 Sobic001G226700--Sobic006G032900 Sobic010G143800 Sobic010G143800 Sobic001G226700--Sobic010G143800 Sobic005G084100 Sobic005G084100 Sobic008G083000--Sobic005G084100 Sobic008G083000--Sobic010G279700 Sobic008G131000 Sobic008G131000 Sobic008G083000--Sobic008G131000 Sobic008G083000--Sobic001G281600 Sobic009G050900 Sobic009G050900 Sobic008G083000--Sobic009G050900 Sobic008G083000--Sobic003G401100 Sobic008G011100 Sobic008G011100 Sobic008G083000--Sobic008G011100 Sobic004G018300 Sobic004G018300 Sobic008G083000--Sobic004G018300 Sobic007G000800 Sobic007G000800 Sobic008G083000--Sobic007G000800 Sobic010G236400 Sobic010G236400 Sobic003G401100--Sobic010G236400 Sobic004G084300 Sobic004G084300 Sobic003G401100--Sobic004G084300 Sobic003G401100--Sobic001G281600 Sobic003G081000 Sobic003G081000 Sobic003G401100--Sobic003G081000 Sobic007G027700 Sobic007G027700 Sobic003G401100--Sobic007G027700 Sobic001G143500 Sobic001G143500 Sobic003G401100--Sobic001G143500 Sobic003G401100--Sobic007G000800 Sobic004G274200 Sobic004G274200 Sobic003G401100--Sobic004G274200 Sobic003G241200 Sobic003G241200 Sobic003G401100--Sobic003G241200 Sobic001G026500 Sobic001G026500 Sobic001G102700--Sobic001G026500 Sobic001G111600 Sobic001G111600 Sobic001G102700--Sobic001G111600 Sobic001G102700--Sobic001G362200 Sobic002G313400 Sobic002G313400 Sobic001G102700--Sobic002G313400 Sobic001G102700--Sobic010G275500 Sobic008G118200 Sobic008G118200 Sobic001G102700--Sobic008G118200 Sobic001G094900 Sobic001G094900 Sobic001G102700--Sobic001G094900 Sobic005G220000 Sobic005G220000 Sobic001G102700--Sobic005G220000 Sobic005G128400 Sobic005G128400 Sobic001G102700--Sobic005G128400 Sobic009G214200 Sobic009G214200 Sobic009G103600--Sobic009G214200 Sobic009G103600--Sobic003G109700 Sobic009G103600--Sobic006G032900 Sobic002G336800 Sobic002G336800 Sobic009G103600--Sobic002G336800 Sobic005G110475 Sobic005G110475 Sobic009G103600--Sobic005G110475 Sobic003G144950 Sobic003G144950 Sobic009G103600--Sobic003G144950 Sobic004G019500 Sobic004G019500 Sobic009G103600--Sobic004G019500 Sobic003G324100 Sobic003G324100 Sobic009G103600--Sobic003G324100 Sobic009G215800 Sobic009G215800 Sobic009G103600--Sobic009G215800
Octagon: transcription factors


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