Gene annotation
Transcriptome id Sobic.006G044000.1,Sobic.006G044000.2
Synonym
Functional annotation -
UniProt A0A1B6PK53
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G027700 expressed protein -
2 Sobic.002G143900 OsFBL19 - F-box domain and LRR containing protein, expressed K10273: F-box and leucine-rich repeat protein 7
3 Sobic.007G112000 - -
4 Sobic.001G267900 - -
5 Sobic.001G518400 EF hand family protein, putative, expressed -
6 Sobic.010G209400 WD domain, G-beta repeat domain containing protein, expressed K03130: transcription initiation factor TFIID subunit 5
7 Sobic.006G032900 endonuclease/exonuclease/phosphatase family protein, putative, expressed -
8 Sobic.001G078100 expressed protein -
9 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
10 Sobic.003G153000 galactosyltransferase family protein, putative, expressed -
11 Sobic.001G138400 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
12 Sobic.003G412300 expressed protein -
13 Sobic.005G220000 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
14 Sobic.003G074200 actin, putative, expressed K11672: ACTR5, ARP5, actin-related protein 5
15 Sobic.003G340900 SAG20, putative, expressed -
16 Sobic.006G226300 SDA1, putative, expressed K14856: SDA1, protein SDA1
17 Sobic.001G376900 utp14 protein, putative, expressed K14567: U3 small nucleolar RNA-associated protein 14
18 Sobic.006G138000 expressed protein -
19 Sobic.007G043900 Brix domain containing protein, putative, expressed K14561: U3 small nucleolar ribonucleoprotein protein IMP4
20 Sobic.001G515100 ATP binding protein, putative, expressed K06883: uncharacterized protein


Gene co-expression network
sample Sobic006G044000 Sobic006G044000 Sobic007G027700 Sobic007G027700 Sobic006G044000--Sobic007G027700 Sobic002G143900 Sobic002G143900 Sobic006G044000--Sobic002G143900 Sobic007G112000 Sobic007G112000 Sobic006G044000--Sobic007G112000 Sobic001G267900 Sobic001G267900 Sobic006G044000--Sobic001G267900 Sobic001G518400 Sobic001G518400 Sobic006G044000--Sobic001G518400 Sobic010G209400 Sobic010G209400 Sobic006G044000--Sobic010G209400 Sobic006G032900 Sobic006G032900 Sobic006G044000--Sobic006G032900 Sobic001G078100 Sobic001G078100 Sobic006G044000--Sobic001G078100 Sobic005G216300 Sobic005G216300 Sobic006G044000--Sobic005G216300 Sobic008G127400 Sobic008G127400 Sobic007G027700--Sobic008G127400 Sobic003G401100 Sobic003G401100 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic001G143500 Sobic001G143500 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic006G267300 Sobic006G267300 Sobic007G027700--Sobic006G267300 Sobic006G233300 Sobic006G233300 Sobic002G143900--Sobic006G233300 Sobic002G280600 Sobic002G280600 Sobic002G143900--Sobic002G280600 Sobic002G394800 Sobic002G394800 Sobic002G143900--Sobic002G394800 Sobic002G143900--Sobic007G027700 Sobic002G143900--Sobic001G143500 Sobic002G143900--Sobic006G044000 Sobic001G526300 Sobic001G526300 Sobic002G143900--Sobic001G526300 Sobic010G232900 Sobic010G232900 Sobic002G143900--Sobic010G232900 Sobic008G139700 Sobic008G139700 Sobic002G143900--Sobic008G139700 Sobic007G112000--Sobic006G044000 Sobic006G180700 Sobic006G180700 Sobic007G112000--Sobic006G180700 Sobic006G226300 Sobic006G226300 Sobic007G112000--Sobic006G226300 Sobic007G112000--Sobic006G032900 Sobic003G006400 Sobic003G006400 Sobic007G112000--Sobic003G006400 Sobic008G009600 Sobic008G009600 Sobic007G112000--Sobic008G009600 Sobic008G147200 Sobic008G147200 Sobic007G112000--Sobic008G147200 Sobic004G011000 Sobic004G011000 Sobic007G112000--Sobic004G011000 Sobic008G098600 Sobic008G098600 Sobic007G112000--Sobic008G098600 Sobic010G056000 Sobic010G056000 Sobic001G267900--Sobic010G056000 Sobic006G165000 Sobic006G165000 Sobic001G267900--Sobic006G165000 Sobic003G084900 Sobic003G084900 Sobic001G267900--Sobic003G084900 Sobic010G028800 Sobic010G028800 Sobic001G267900--Sobic010G028800 Sobic001G267900--Sobic001G518400 Sobic003G241200 Sobic003G241200 Sobic001G267900--Sobic003G241200 Sobic001G094000 Sobic001G094000 Sobic001G267900--Sobic001G094000 Sobic006G222300 Sobic006G222300 Sobic001G267900--Sobic006G222300 Sobic001G362200 Sobic001G362200 Sobic001G267900--Sobic001G362200 Sobic001G170100 Sobic001G170100 Sobic001G518400--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic001G518400--Sobic006G138000 Sobic001G335900 Sobic001G335900 Sobic001G518400--Sobic001G335900 Sobic001G518400--Sobic001G078100 Sobic009G229600 Sobic009G229600 Sobic001G518400--Sobic009G229600 Sobic010G275500 Sobic010G275500 Sobic001G518400--Sobic010G275500 Sobic006G202200 Sobic006G202200 Sobic001G518400--Sobic006G202200 Sobic003G126600 Sobic003G126600 Sobic001G518400--Sobic003G126600 Sobic001G369000 Sobic001G369000 Sobic001G518400--Sobic001G369000 Sobic010G236400 Sobic010G236400 Sobic010G209400--Sobic010G236400 Sobic004G084300 Sobic004G084300 Sobic010G209400--Sobic004G084300 Sobic009G210500 Sobic009G210500 Sobic010G209400--Sobic009G210500 Sobic001G511500 Sobic001G511500 Sobic010G209400--Sobic001G511500 Sobic001G542700 Sobic001G542700 Sobic010G209400--Sobic001G542700 Sobic009G040600 Sobic009G040600 Sobic010G209400--Sobic009G040600 Sobic003G038500 Sobic003G038500 Sobic010G209400--Sobic003G038500 Sobic008G131000 Sobic008G131000 Sobic010G209400--Sobic008G131000 Sobic008G047800 Sobic008G047800 Sobic010G209400--Sobic008G047800 Sobic006G032900--Sobic001G362200 Sobic003G109700 Sobic003G109700 Sobic006G032900--Sobic003G109700 Sobic006G032900--Sobic001G518400 Sobic002G317300 Sobic002G317300 Sobic006G032900--Sobic002G317300 Sobic001G226700 Sobic001G226700 Sobic006G032900--Sobic001G226700 Sobic008G083000 Sobic008G083000 Sobic006G032900--Sobic008G083000 Sobic006G032900--Sobic003G401100 Sobic001G102700 Sobic001G102700 Sobic006G032900--Sobic001G102700 Sobic009G103600 Sobic009G103600 Sobic006G032900--Sobic009G103600 Sobic001G078100--Sobic001G518400 Sobic001G111600 Sobic001G111600 Sobic001G078100--Sobic001G111600 Sobic001G078100--Sobic007G027700 Sobic005G220000 Sobic005G220000 Sobic001G078100--Sobic005G220000 Sobic003G314700 Sobic003G314700 Sobic001G078100--Sobic003G314700 Sobic001G094900 Sobic001G094900 Sobic001G078100--Sobic001G094900 Sobic001G078100--Sobic004G325400 Sobic001G026500 Sobic001G026500 Sobic001G078100--Sobic001G026500 Sobic001G078100--Sobic006G138000 Sobic003G099300 Sobic003G099300 Sobic005G216300--Sobic003G099300 Sobic005G216300--Sobic007G027700 Sobic004G039600 Sobic004G039600 Sobic005G216300--Sobic004G039600 Sobic005G216300--Sobic001G369000 Sobic005G216300--Sobic001G335900 Sobic001G426600 Sobic001G426600 Sobic005G216300--Sobic001G426600 Sobic001G142100 Sobic001G142100 Sobic005G216300--Sobic001G142100 Sobic005G216300--Sobic003G126600 Sobic006G208500 Sobic006G208500 Sobic005G216300--Sobic006G208500
Octagon: transcription factors


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