Gene annotation
Transcriptome id Sobic.001G114400.1,Sobic.001G114400.2
Synonym PUR4, Sb01g010140
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
phosphoribosylformylglycinamidine synthase, putative, expressed
UniProt A0A1B6QIH6
Pfam PF02769 PF13507
Panther DB PTHR10099 PTHR10099:SF1
NCBI CDD -
KEGG Orthology K01952; PFAS, phosphoribosylformylglycinamidine synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74260 : purine biosynthesis 4
RAP-DB (Rice) LOC_Os01g66500.1 : phosphoribosylformylglycinamidine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a007880 , Zm00025a009464
Brachypodium KQJ97072 , KQJ83122 , KQK17033 , PNT67533 , PNT67532
Barley HORVU2Hr1G070850.2 , HORVU2Hr1G070850.4 , HORVU2Hr1G070850.5 , HORVU2Hr1G070850.6 , HORVU2Hr1G070850.7 , HORVU2Hr1G070850.8 , HORVU2Hr1G070850.9 , HORVU1Hr1G040670.4 , HORVU1Hr1G040670.5 , HORVU1Hr1G040670.6 , HORVU1Hr1G040670.7 , HORVU1Hr1G040670.1 , HORVU1Hr1G040670.2 , HORVU1Hr1G040670.3 , HORVU1Hr1G040670.8 , HORVU1Hr1G040670.9 , HORVU1Hr1G040670.10 , HORVU1Hr1G040670.12 , HORVU1Hr1G040670.11 , HORVU2Hr1G070850.12 , HORVU2Hr1G070850.10 , HORVU2Hr1G070850.11 , HORVU1Hr1G080070.2 , HORVU1Hr1G080070.3 , HORVU1Hr1G080070.1 , HORVU1Hr1G080070.6 , HORVU1Hr1G080070.4 , HORVU1Hr1G080070.5
Wheat TraesCS2A02G286500 , TraesCS1B02G170300 , TraesCS2A02G286500 , TraesCS1A02G152900 , TraesCS1D02G364700 , TraesCS2B02G303300 , TraesCS2B02G303300 , TraesCS1B02G376800 , TraesCS1B02G376800 , TraesCS1A02G360300 , TraesCS2D02G285100 , TraesCS2D02G285100 , TraesCS1D02G149900
Populus PNT17631 , PNT17630


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G222600 similar to DEAD-box ATP-dependent RNA helicase 25(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
2 Sobic.002G191100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
3 Sobic.003G030400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA binding protein, putative, expressed K11145: ribonuclease III family protein
4 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
5 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
6 Sobic.008G148400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein DSP1, putative, expressed -
7 Sobic.010G039200 cysteine synthase, putative, expressed K01738: cysteine synthase
8 Sobic.003G324100 haloacid dehalogenase, putative, expressed K01094: phosphatidylglycerophosphatase GEP4
9 Sobic.010G211500 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
10 Sobic.009G137000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
11 Sobic.010G258300 integral membrane protein, putative, expressed -
12 Sobic.002G404900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA pseudouridine synthase, putative, expressed -
13 Sobic.005G209000 GRAS family transcription factor domain containing protein, expressed -
14 Sobic.004G231600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.005G145300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBO10 - F-box and other domain containing protein, expressed K12116: flavin-binding kelch repeat F-box protein 1
16 Sobic.009G103600 MEE12, putative, expressed -
17 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
18 Sobic.002G168500 NBS-LRR type disease resistance protein, putative, expressed -
19 Sobic.003G039300 expressed protein -
20 Sobic.001G207200 MEE12, putative, expressed -


Gene co-expression network
sample Sobic001G114400 Sobic001G114400 Sobic003G222600 Sobic003G222600 Sobic001G114400--Sobic003G222600 Sobic002G191100 Sobic002G191100 Sobic001G114400--Sobic002G191100 Sobic003G030400 Sobic003G030400 Sobic001G114400--Sobic003G030400 Sobic009G036300 Sobic009G036300 Sobic001G114400--Sobic009G036300 Sobic004G070200 Sobic004G070200 Sobic001G114400--Sobic004G070200 Sobic008G148400 Sobic008G148400 Sobic001G114400--Sobic008G148400 Sobic010G039200 Sobic010G039200 Sobic001G114400--Sobic010G039200 Sobic003G324100 Sobic003G324100 Sobic001G114400--Sobic003G324100 Sobic010G211500 Sobic010G211500 Sobic001G114400--Sobic010G211500 Sobic003G222600--Sobic003G030400 Sobic003G222600--Sobic008G148400 Sobic003G222600--Sobic001G114400 Sobic010G258300 Sobic010G258300 Sobic003G222600--Sobic010G258300 Sobic003G222600--Sobic004G070200 Sobic009G137000 Sobic009G137000 Sobic003G222600--Sobic009G137000 Sobic007G205600 Sobic007G205600 Sobic003G222600--Sobic007G205600 Sobic009G233800 Sobic009G233800 Sobic003G222600--Sobic009G233800 Sobic003G222600--Sobic009G036300 Sobic002G191100--Sobic001G114400 Sobic002G181132 Sobic002G181132 Sobic002G191100--Sobic002G181132 Sobic003G162800 Sobic003G162800 Sobic002G191100--Sobic003G162800 Sobic008G038600 Sobic008G038600 Sobic002G191100--Sobic008G038600 Sobic003G039300 Sobic003G039300 Sobic002G191100--Sobic003G039300 Sobic003G345900 Sobic003G345900 Sobic002G191100--Sobic003G345900 Sobic007G137800 Sobic007G137800 Sobic002G191100--Sobic007G137800 Sobic009G214200 Sobic009G214200 Sobic002G191100--Sobic009G214200 Sobic002G191100--Sobic004G070200 Sobic003G030400--Sobic003G222600 Sobic003G030400--Sobic008G148400 Sobic003G030400--Sobic009G233800 Sobic001G076200 Sobic001G076200 Sobic003G030400--Sobic001G076200 Sobic009G238100 Sobic009G238100 Sobic003G030400--Sobic009G238100 Sobic003G030400--Sobic009G137000 Sobic003G030400--Sobic001G114400 Sobic003G030400--Sobic004G070200 Sobic004G249500 Sobic004G249500 Sobic003G030400--Sobic004G249500 Sobic007G227600 Sobic007G227600 Sobic009G036300--Sobic007G227600 Sobic001G388400 Sobic001G388400 Sobic009G036300--Sobic001G388400 Sobic010G074200 Sobic010G074200 Sobic009G036300--Sobic010G074200 Sobic010G028000 Sobic010G028000 Sobic009G036300--Sobic010G028000 Sobic010G074100 Sobic010G074100 Sobic009G036300--Sobic010G074100 Sobic009G036300--Sobic010G211500 Sobic009G234200 Sobic009G234200 Sobic009G036300--Sobic009G234200 Sobic006G204100 Sobic006G204100 Sobic009G036300--Sobic006G204100 Sobic002G163700 Sobic002G163700 Sobic009G036300--Sobic002G163700 Sobic004G070200--Sobic003G222600 Sobic004G070200--Sobic003G030400 Sobic007G131200 Sobic007G131200 Sobic004G070200--Sobic007G131200 Sobic002G172600 Sobic002G172600 Sobic004G070200--Sobic002G172600 Sobic006G110200 Sobic006G110200 Sobic004G070200--Sobic006G110200 Sobic004G070200--Sobic009G137000 Sobic004G070200--Sobic001G114400 Sobic004G070200--Sobic002G191100 Sobic001G246200 Sobic001G246200 Sobic004G070200--Sobic001G246200 Sobic008G148400--Sobic009G238100 Sobic001G426400 Sobic001G426400 Sobic008G148400--Sobic001G426400 Sobic008G148400--Sobic003G030400 Sobic008G148400--Sobic003G222600 Sobic001G423100 Sobic001G423100 Sobic008G148400--Sobic001G423100 Sobic009G154600 Sobic009G154600 Sobic008G148400--Sobic009G154600 Sobic008G148400--Sobic007G131200 Sobic008G148400--Sobic009G233800 Sobic006G265400 Sobic006G265400 Sobic008G148400--Sobic006G265400 Sobic010G039200--Sobic001G114400 Sobic005G145300 Sobic005G145300 Sobic010G039200--Sobic005G145300 Sobic004G296000 Sobic004G296000 Sobic010G039200--Sobic004G296000 Sobic001G224200 Sobic001G224200 Sobic010G039200--Sobic001G224200 Sobic004G290000 Sobic004G290000 Sobic010G039200--Sobic004G290000 Sobic001G207200 Sobic001G207200 Sobic010G039200--Sobic001G207200 Sobic003G297800 Sobic003G297800 Sobic010G039200--Sobic003G297800 Sobic009G094700 Sobic009G094700 Sobic010G039200--Sobic009G094700 Sobic004G265900 Sobic004G265900 Sobic010G039200--Sobic004G265900 Sobic001G485600 Sobic001G485600 Sobic003G324100--Sobic001G485600 Sobic009G103600 Sobic009G103600 Sobic003G324100--Sobic009G103600 Sobic002G146400 Sobic002G146400 Sobic003G324100--Sobic002G146400 Sobic003G324100--Sobic001G114400 Sobic001G429300 Sobic001G429300 Sobic003G324100--Sobic001G429300 Sobic003G324100--Sobic002G191100 Sobic003G245900 Sobic003G245900 Sobic003G324100--Sobic003G245900 Sobic001G069600 Sobic001G069600 Sobic003G324100--Sobic001G069600 Sobic004G087600 Sobic004G087600 Sobic003G324100--Sobic004G087600 Sobic010G211500--Sobic007G227600 Sobic010G211500--Sobic009G036300 Sobic010G211500--Sobic001G207200 Sobic009G052700 Sobic009G052700 Sobic010G211500--Sobic009G052700 Sobic003G084500 Sobic003G084500 Sobic010G211500--Sobic003G084500 Sobic001G450600 Sobic001G450600 Sobic010G211500--Sobic001G450600 Sobic003G334100 Sobic003G334100 Sobic010G211500--Sobic003G334100 Sobic010G183400 Sobic010G183400 Sobic010G211500--Sobic010G183400 Sobic010G211500--Sobic010G074100
Octagon: transcription factors


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