Gene annotation
Transcriptome id Sobic.009G137000.2,Sobic.009G137000.3,Sobic.009G137000.1
Synonym Sb09g020310
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
monooxygenase, putative, expressed
UniProt A0A1Z5R3A1 , A0A1B6P8M6 , A0A1Z5R2J8
Pfam PF00890 PF07992 PF00890
Panther DB PTHR10617 PTHR10617:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G30720 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os05g34040.1,LOC_Os05g34040.2 : monooxygenase, putative, expressed
MaizeGDB (Corn) Zm00025a043691
Brachypodium PNT71264 , KQK06269 , KQK06268
Barley HORVU1Hr1G063510.36 , HORVU1Hr1G063510.37 , HORVU1Hr1G063510.34 , HORVU1Hr1G063510.35 , HORVU1Hr1G063510.33 , HORVU1Hr1G063510.30 , HORVU1Hr1G063510.31 , HORVU1Hr1G063510.38 , HORVU1Hr1G063510.39 , HORVU1Hr1G063510.43 , HORVU1Hr1G063510.6 , HORVU1Hr1G063510.7 , HORVU1Hr1G063510.4 , HORVU1Hr1G063510.5 , HORVU1Hr1G063510.2 , HORVU1Hr1G063510.3 , HORVU1Hr1G063510.1 , HORVU1Hr1G063510.8 , HORVU1Hr1G063510.9 , HORVU1Hr1G063510.18 , HORVU1Hr1G063510.19 , HORVU1Hr1G063510.14 , HORVU1Hr1G063510.15 , HORVU1Hr1G063510.16 , HORVU1Hr1G063510.17 , HORVU1Hr1G063510.10 , HORVU1Hr1G063510.11 , HORVU1Hr1G063510.12 , HORVU1Hr1G063510.13 , HORVU1Hr1G063510.21 , HORVU1Hr1G063510.20 , HORVU1Hr1G063510.23 , HORVU1Hr1G063510.22 , HORVU1Hr1G063510.24 , HORVU1Hr1G063510.27 , HORVU1Hr1G063510.29 , HORVU1Hr1G063510.28
Wheat TraesCS1D02G257300 , TraesCS1A02G258000 , TraesCS1A02G258000 , TraesCS1B02G268400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G395300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsClp4 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
2 Sobic.002G404900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA pseudouridine synthase, putative, expressed -
3 Sobic.003G039300 expressed protein -
4 Sobic.002G243650 - K00784: ribonuclease Z
5 Sobic.009G233800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf23, putative, expressed -
6 Sobic.003G222600 similar to DEAD-box ATP-dependent RNA helicase 25(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
7 Sobic.006G110200 CRS1/YhbY domain containing protein, expressed -
8 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
9 Sobic.003G030400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA binding protein, putative, expressed K11145: ribonuclease III family protein
10 Sobic.007G116100 thioredoxin, putative, expressed -
11 Sobic.007G069400 pentatricopeptide, putative, expressed -
12 Sobic.003G162800 expressed protein -
13 Sobic.006G204100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
14 Sobic.003G075100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
15 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
16 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
17 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
18 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
19 Sobic.001G228300 SAP domain containing protein, expressed -
20 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit


Gene co-expression network
sample Sobic009G137000 Sobic009G137000 Sobic001G395300 Sobic001G395300 Sobic009G137000--Sobic001G395300 Sobic002G404900 Sobic002G404900 Sobic009G137000--Sobic002G404900 Sobic003G039300 Sobic003G039300 Sobic009G137000--Sobic003G039300 Sobic002G243650 Sobic002G243650 Sobic009G137000--Sobic002G243650 Sobic009G233800 Sobic009G233800 Sobic009G137000--Sobic009G233800 Sobic003G222600 Sobic003G222600 Sobic009G137000--Sobic003G222600 Sobic006G110200 Sobic006G110200 Sobic009G137000--Sobic006G110200 Sobic006G237100 Sobic006G237100 Sobic009G137000--Sobic006G237100 Sobic003G030400 Sobic003G030400 Sobic009G137000--Sobic003G030400 Sobic001G395300--Sobic009G137000 Sobic001G395300--Sobic002G404900 Sobic001G228300 Sobic001G228300 Sobic001G395300--Sobic001G228300 Sobic001G395300--Sobic006G237100 Sobic006G263800 Sobic006G263800 Sobic001G395300--Sobic006G263800 Sobic002G140000 Sobic002G140000 Sobic001G395300--Sobic002G140000 Sobic006G204100 Sobic006G204100 Sobic001G395300--Sobic006G204100 Sobic007G116100 Sobic007G116100 Sobic001G395300--Sobic007G116100 Sobic010G027200 Sobic010G027200 Sobic001G395300--Sobic010G027200 Sobic002G404900--Sobic006G237100 Sobic002G404900--Sobic009G137000 Sobic002G404900--Sobic001G395300 Sobic001G437200 Sobic001G437200 Sobic002G404900--Sobic001G437200 Sobic009G036300 Sobic009G036300 Sobic002G404900--Sobic009G036300 Sobic001G161400 Sobic001G161400 Sobic002G404900--Sobic001G161400 Sobic005G009300 Sobic005G009300 Sobic002G404900--Sobic005G009300 Sobic001G445200 Sobic001G445200 Sobic002G404900--Sobic001G445200 Sobic002G404900--Sobic006G204100 Sobic003G039300--Sobic006G110200 Sobic003G084500 Sobic003G084500 Sobic003G039300--Sobic003G084500 Sobic007G069400 Sobic007G069400 Sobic003G039300--Sobic007G069400 Sobic003G039300--Sobic001G161400 Sobic001G537700 Sobic001G537700 Sobic003G039300--Sobic001G537700 Sobic003G039300--Sobic009G137000 Sobic010G211500 Sobic010G211500 Sobic003G039300--Sobic010G211500 Sobic003G039300--Sobic006G237100 Sobic007G015300 Sobic007G015300 Sobic003G039300--Sobic007G015300 Sobic002G243650--Sobic009G137000 Sobic002G243650--Sobic009G233800 Sobic002G243650--Sobic003G030400 Sobic010G074100 Sobic010G074100 Sobic002G243650--Sobic010G074100 Sobic002G243650--Sobic003G222600 Sobic002G243650--Sobic003G039300 Sobic003G404400 Sobic003G404400 Sobic002G243650--Sobic003G404400 Sobic002G243650--Sobic006G110200 Sobic002G243650--Sobic001G537700 Sobic010G074200 Sobic010G074200 Sobic009G233800--Sobic010G074200 Sobic009G233800--Sobic006G204100 Sobic001G388400 Sobic001G388400 Sobic009G233800--Sobic001G388400 Sobic004G055600 Sobic004G055600 Sobic009G233800--Sobic004G055600 Sobic009G233800--Sobic003G030400 Sobic009G233800--Sobic010G074100 Sobic009G233800--Sobic009G137000 Sobic001G076200 Sobic001G076200 Sobic009G233800--Sobic001G076200 Sobic010G028000 Sobic010G028000 Sobic009G233800--Sobic010G028000 Sobic003G222600--Sobic003G030400 Sobic008G148400 Sobic008G148400 Sobic003G222600--Sobic008G148400 Sobic001G114400 Sobic001G114400 Sobic003G222600--Sobic001G114400 Sobic010G258300 Sobic010G258300 Sobic003G222600--Sobic010G258300 Sobic004G070200 Sobic004G070200 Sobic003G222600--Sobic004G070200 Sobic003G222600--Sobic009G137000 Sobic007G205600 Sobic007G205600 Sobic003G222600--Sobic007G205600 Sobic003G222600--Sobic009G233800 Sobic003G222600--Sobic009G036300 Sobic006G110200--Sobic003G039300 Sobic006G110200--Sobic007G069400 Sobic006G110200--Sobic002G140000 Sobic006G110200--Sobic001G537700 Sobic006G110200--Sobic009G137000 Sobic006G110200--Sobic007G015300 Sobic002G045700 Sobic002G045700 Sobic006G110200--Sobic002G045700 Sobic006G110200--Sobic010G027200 Sobic006G110200--Sobic001G228300 Sobic001G281500 Sobic001G281500 Sobic006G237100--Sobic001G281500 Sobic006G237100--Sobic010G027200 Sobic001G375000 Sobic001G375000 Sobic006G237100--Sobic001G375000 Sobic006G237100--Sobic002G404900 Sobic006G237100--Sobic002G140000 Sobic006G237100--Sobic001G161400 Sobic006G237100--Sobic001G437200 Sobic006G237100--Sobic007G116100 Sobic003G310100 Sobic003G310100 Sobic006G237100--Sobic003G310100 Sobic003G030400--Sobic003G222600 Sobic003G030400--Sobic008G148400 Sobic003G030400--Sobic009G233800 Sobic003G030400--Sobic001G076200 Sobic009G238100 Sobic009G238100 Sobic003G030400--Sobic009G238100 Sobic003G030400--Sobic009G137000 Sobic003G030400--Sobic001G114400 Sobic003G030400--Sobic004G070200 Sobic004G249500 Sobic004G249500 Sobic003G030400--Sobic004G249500
Octagon: transcription factors


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