Gene annotation
Transcriptome id Sobic.007G116100.1
Synonym TRXz, TRXP, Sb07g019220
Functional annotation thioredoxin, putative, expressed
UniProt C5YKJ9
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF276
NCBI CDD KOG0907; Thioredoxin
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT3G06730 : Thioredoxin z
RAP-DB (Rice) LOC_Os08g29110.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a006136
Brachypodium KQJ98131 , KQJ98130
Barley HORVU4Hr1G012560.14 , HORVU4Hr1G012560.15 , HORVU4Hr1G012560.16 , HORVU4Hr1G012560.10 , HORVU4Hr1G012560.11 , HORVU4Hr1G012560.12 , HORVU4Hr1G012560.13 , HORVU4Hr1G012560.6 , HORVU4Hr1G012560.7 , HORVU4Hr1G012560.4 , HORVU4Hr1G012560.5 , HORVU4Hr1G012560.2 , HORVU4Hr1G012560.3 , HORVU4Hr1G012560.1 , HORVU4Hr1G012560.8 , HORVU4Hr1G012560.9
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
2 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
3 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
4 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
5 Sobic.001G099000 expressed protein -
6 Sobic.007G015300 calreticulin family protein, expressed -
7 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
8 Sobic.004G338300 rho termination factor, N-terminal domain containing protein, expressed -
9 Sobic.005G022800 GTP binding protein, putative, expressed -
10 Sobic.002G158800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -
11 Sobic.003G327200 GHMP kinases ATP-binding protein, putative, expressed K00919: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
12 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
13 Sobic.003G373300 DNA polymerase I, putative, expressed -
14 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
15 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
16 Sobic.005G110481 - -
17 Sobic.007G171800 RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
18 Sobic.004G255500 SET domain-containing protein, putative, expressed -
19 Sobic.009G251000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SET domain containing protein, expressed -
20 Sobic.001G003900 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic007G116100 Sobic007G116100 Sobic010G027200 Sobic010G027200 Sobic007G116100--Sobic010G027200 Sobic001G281500 Sobic001G281500 Sobic007G116100--Sobic001G281500 Sobic002G140000 Sobic002G140000 Sobic007G116100--Sobic002G140000 Sobic006G263800 Sobic006G263800 Sobic007G116100--Sobic006G263800 Sobic001G099000 Sobic001G099000 Sobic007G116100--Sobic001G099000 Sobic007G015300 Sobic007G015300 Sobic007G116100--Sobic007G015300 Sobic006G237100 Sobic006G237100 Sobic007G116100--Sobic006G237100 Sobic004G338300 Sobic004G338300 Sobic007G116100--Sobic004G338300 Sobic005G022800 Sobic005G022800 Sobic007G116100--Sobic005G022800 Sobic010G027200--Sobic002G140000 Sobic001G375000 Sobic001G375000 Sobic010G027200--Sobic001G375000 Sobic010G027200--Sobic001G099000 Sobic010G027200--Sobic007G116100 Sobic010G027200--Sobic006G237100 Sobic010G027200--Sobic007G015300 Sobic005G184300 Sobic005G184300 Sobic010G027200--Sobic005G184300 Sobic010G027200--Sobic004G338300 Sobic009G104700 Sobic009G104700 Sobic010G027200--Sobic009G104700 Sobic001G281500--Sobic006G237100 Sobic001G281500--Sobic007G116100 Sobic006G107600 Sobic006G107600 Sobic001G281500--Sobic006G107600 Sobic001G281500--Sobic001G099000 Sobic001G281500--Sobic001G375000 Sobic007G171800 Sobic007G171800 Sobic001G281500--Sobic007G171800 Sobic001G281500--Sobic006G263800 Sobic001G281500--Sobic010G027200 Sobic001G281500--Sobic005G184300 Sobic002G140000--Sobic010G027200 Sobic002G140000--Sobic007G116100 Sobic002G140000--Sobic007G015300 Sobic002G140000--Sobic005G022800 Sobic002G140000--Sobic006G237100 Sobic002G140000--Sobic006G263800 Sobic002G140000--Sobic001G099000 Sobic002G140000--Sobic001G375000 Sobic001G321400 Sobic001G321400 Sobic002G140000--Sobic001G321400 Sobic006G263800--Sobic007G116100 Sobic002G190100 Sobic002G190100 Sobic006G263800--Sobic002G190100 Sobic006G263800--Sobic002G140000 Sobic006G263800--Sobic001G281500 Sobic006G263800--Sobic005G022800 Sobic006G263800--Sobic001G099000 Sobic006G263800--Sobic010G027200 Sobic006G263800--Sobic006G237100 Sobic001G120000 Sobic001G120000 Sobic006G263800--Sobic001G120000 Sobic002G158800 Sobic002G158800 Sobic001G099000--Sobic002G158800 Sobic001G099000--Sobic005G184300 Sobic001G099000--Sobic007G015300 Sobic002G081500 Sobic002G081500 Sobic001G099000--Sobic002G081500 Sobic004G255500 Sobic004G255500 Sobic001G099000--Sobic004G255500 Sobic001G099000--Sobic010G027200 Sobic002G109000 Sobic002G109000 Sobic001G099000--Sobic002G109000 Sobic003G373300 Sobic003G373300 Sobic001G099000--Sobic003G373300 Sobic006G166000 Sobic006G166000 Sobic001G099000--Sobic006G166000 Sobic007G015300--Sobic001G099000 Sobic007G015300--Sobic002G158800 Sobic007G015300--Sobic004G338300 Sobic007G015300--Sobic010G027200 Sobic007G015300--Sobic002G140000 Sobic007G015300--Sobic005G184300 Sobic007G015300--Sobic001G375000 Sobic007G015300--Sobic007G116100 Sobic003G128400 Sobic003G128400 Sobic007G015300--Sobic003G128400 Sobic006G237100--Sobic001G281500 Sobic006G237100--Sobic010G027200 Sobic006G237100--Sobic001G375000 Sobic002G404900 Sobic002G404900 Sobic006G237100--Sobic002G404900 Sobic006G237100--Sobic002G140000 Sobic001G161400 Sobic001G161400 Sobic006G237100--Sobic001G161400 Sobic001G437200 Sobic001G437200 Sobic006G237100--Sobic001G437200 Sobic006G237100--Sobic007G116100 Sobic003G310100 Sobic003G310100 Sobic006G237100--Sobic003G310100 Sobic004G338300--Sobic002G158800 Sobic004G338300--Sobic007G015300 Sobic004G338300--Sobic001G099000 Sobic004G338300--Sobic010G027200 Sobic004G338300--Sobic007G116100 Sobic010G035200 Sobic010G035200 Sobic004G338300--Sobic010G035200 Sobic004G338300--Sobic009G104700 Sobic010G011200 Sobic010G011200 Sobic004G338300--Sobic010G011200 Sobic002G013700 Sobic002G013700 Sobic004G338300--Sobic002G013700 Sobic005G022800--Sobic002G140000 Sobic005G022800--Sobic006G263800 Sobic005G022800--Sobic004G255500 Sobic005G022800--Sobic003G373300 Sobic005G197300 Sobic005G197300 Sobic005G022800--Sobic005G197300 Sobic005G022800--Sobic001G099000 Sobic005G022800--Sobic007G116100 Sobic005G022800--Sobic010G027200 Sobic008G021700 Sobic008G021700 Sobic005G022800--Sobic008G021700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.