Gene annotation
Transcriptome id Sobic.001G228300.1
Synonym PTAC3
Functional annotation SAP domain containing protein, expressed
UniProt C5WZE7
Pfam PF02037 PF13812
Panther DB PTHR31407 PTHR31407:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04260 : plastid transcriptionally active 3
RAP-DB (Rice) LOC_Os10g32540.1 : SAP domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006694
Brachypodium KQJ96976
Barley HORVU1Hr1G038620.4 , HORVU1Hr1G038620.5 , HORVU1Hr1G038620.6 , HORVU1Hr1G038620.7 , HORVU1Hr1G038620.8 , HORVU1Hr1G038620.9 , HORVU1Hr1G038620.3 , HORVU1Hr1G038620.23 , HORVU1Hr1G038620.22 , HORVU1Hr1G038620.21 , HORVU1Hr1G038620.20 , HORVU1Hr1G038620.24 , HORVU1Hr1G038620.18 , HORVU1Hr1G038620.19 , HORVU1Hr1G038620.12 , HORVU1Hr1G038620.13 , HORVU1Hr1G038620.10 , HORVU1Hr1G038620.11 , HORVU1Hr1G038620.16 , HORVU1Hr1G038620.17 , HORVU1Hr1G038620.14 , HORVU1Hr1G038620.15
Wheat TraesCS1D02G143900 , TraesCS1B02G162100 , TraesCS1B02G162100 , TraesCS1A02G144800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G395300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsClp4 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
2 Sobic.002G045700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polynucleotide phosphorylase, putative, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
3 Sobic.001G138000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thiamine biosynthesis protein thiC, putative, expressed K03147: phosphomethylpyrimidine synthase
4 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
5 Sobic.003G392000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PDE312/PTAC10, putative, expressed -
6 Sobic.007G116100 thioredoxin, putative, expressed -
7 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
8 Sobic.003G283100 OsSub3 - Putative Subtilisin homologue, expressed -
9 Sobic.006G110200 CRS1/YhbY domain containing protein, expressed -
10 Sobic.005G142900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G124100 - -
12 Sobic.009G137000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
13 Sobic.001G172300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinase, pfkB family, putative, expressed -
14 Sobic.009G251000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SET domain containing protein, expressed -
15 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
16 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
17 Sobic.004G253800 - -
18 Sobic.008G153200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase, putative, expressed -
19 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
20 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -


Gene co-expression network
sample Sobic001G228300 Sobic001G228300 Sobic001G395300 Sobic001G395300 Sobic001G228300--Sobic001G395300 Sobic002G045700 Sobic002G045700 Sobic001G228300--Sobic002G045700 Sobic001G138000 Sobic001G138000 Sobic001G228300--Sobic001G138000 Sobic006G263800 Sobic006G263800 Sobic001G228300--Sobic006G263800 Sobic003G392000 Sobic003G392000 Sobic001G228300--Sobic003G392000 Sobic007G116100 Sobic007G116100 Sobic001G228300--Sobic007G116100 Sobic002G140000 Sobic002G140000 Sobic001G228300--Sobic002G140000 Sobic003G283100 Sobic003G283100 Sobic001G228300--Sobic003G283100 Sobic006G110200 Sobic006G110200 Sobic001G228300--Sobic006G110200 Sobic009G137000 Sobic009G137000 Sobic001G395300--Sobic009G137000 Sobic002G404900 Sobic002G404900 Sobic001G395300--Sobic002G404900 Sobic001G395300--Sobic001G228300 Sobic006G237100 Sobic006G237100 Sobic001G395300--Sobic006G237100 Sobic001G395300--Sobic006G263800 Sobic001G395300--Sobic002G140000 Sobic006G204100 Sobic006G204100 Sobic001G395300--Sobic006G204100 Sobic001G395300--Sobic007G116100 Sobic010G027200 Sobic010G027200 Sobic001G395300--Sobic010G027200 Sobic002G045700--Sobic002G140000 Sobic004G338300 Sobic004G338300 Sobic002G045700--Sobic004G338300 Sobic002G045700--Sobic001G228300 Sobic009G251000 Sobic009G251000 Sobic002G045700--Sobic009G251000 Sobic007G015300 Sobic007G015300 Sobic002G045700--Sobic007G015300 Sobic002G045700--Sobic010G027200 Sobic002G045700--Sobic006G110200 Sobic002G045700--Sobic007G116100 Sobic010G011200 Sobic010G011200 Sobic002G045700--Sobic010G011200 Sobic001G138000--Sobic001G228300 Sobic001G138000--Sobic001G395300 Sobic004G170600 Sobic004G170600 Sobic001G138000--Sobic004G170600 Sobic001G437801 Sobic001G437801 Sobic001G138000--Sobic001G437801 Sobic001G138000--Sobic006G263800 Sobic001G138000--Sobic003G392000 Sobic009G233800 Sobic009G233800 Sobic001G138000--Sobic009G233800 Sobic005G142900 Sobic005G142900 Sobic001G138000--Sobic005G142900 Sobic001G120000 Sobic001G120000 Sobic001G138000--Sobic001G120000 Sobic006G263800--Sobic007G116100 Sobic002G190100 Sobic002G190100 Sobic006G263800--Sobic002G190100 Sobic006G263800--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic006G263800--Sobic001G281500 Sobic005G022800 Sobic005G022800 Sobic006G263800--Sobic005G022800 Sobic001G099000 Sobic001G099000 Sobic006G263800--Sobic001G099000 Sobic006G263800--Sobic010G027200 Sobic006G263800--Sobic006G237100 Sobic006G263800--Sobic001G120000 Sobic001G172300 Sobic001G172300 Sobic003G392000--Sobic001G172300 Sobic002G190800 Sobic002G190800 Sobic003G392000--Sobic002G190800 Sobic003G392000--Sobic001G228300 Sobic001G383900 Sobic001G383900 Sobic003G392000--Sobic001G383900 Sobic010G012900 Sobic010G012900 Sobic003G392000--Sobic010G012900 Sobic003G392000--Sobic001G120000 Sobic001G188600 Sobic001G188600 Sobic003G392000--Sobic001G188600 Sobic007G034500 Sobic007G034500 Sobic003G392000--Sobic007G034500 Sobic004G253800 Sobic004G253800 Sobic003G392000--Sobic004G253800 Sobic007G116100--Sobic010G027200 Sobic007G116100--Sobic001G281500 Sobic007G116100--Sobic002G140000 Sobic007G116100--Sobic006G263800 Sobic007G116100--Sobic001G099000 Sobic007G116100--Sobic007G015300 Sobic007G116100--Sobic006G237100 Sobic007G116100--Sobic004G338300 Sobic007G116100--Sobic005G022800 Sobic002G140000--Sobic010G027200 Sobic002G140000--Sobic007G116100 Sobic002G140000--Sobic007G015300 Sobic002G140000--Sobic005G022800 Sobic002G140000--Sobic006G237100 Sobic002G140000--Sobic006G263800 Sobic002G140000--Sobic001G099000 Sobic001G375000 Sobic001G375000 Sobic002G140000--Sobic001G375000 Sobic001G321400 Sobic001G321400 Sobic002G140000--Sobic001G321400 Sobic003G283100--Sobic001G228300 Sobic003G283100--Sobic005G142900 Sobic003G283100--Sobic001G120000 Sobic003G283100--Sobic006G263800 Sobic001G255400 Sobic001G255400 Sobic003G283100--Sobic001G255400 Sobic003G283100--Sobic003G392000 Sobic010G270900 Sobic010G270900 Sobic003G283100--Sobic010G270900 Sobic003G283100--Sobic004G170600 Sobic004G055600 Sobic004G055600 Sobic003G283100--Sobic004G055600 Sobic003G039300 Sobic003G039300 Sobic006G110200--Sobic003G039300 Sobic007G069400 Sobic007G069400 Sobic006G110200--Sobic007G069400 Sobic006G110200--Sobic002G140000 Sobic001G537700 Sobic001G537700 Sobic006G110200--Sobic001G537700 Sobic006G110200--Sobic009G137000 Sobic006G110200--Sobic007G015300 Sobic006G110200--Sobic002G045700 Sobic006G110200--Sobic010G027200 Sobic006G110200--Sobic001G228300
Octagon: transcription factors


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