Gene annotation
Transcriptome id Sobic.008G153200.1,Sobic.008G153200.2
Synonym Sb08g020230
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
FAD dependent oxidoreductase, putative, expressed
UniProt A0A1Z5R7T2 , C5YQZ6
Pfam PF13450
Panther DB PTHR16128 PTHR16128:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04650 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os12g40540.1 : FAD dependent oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a004571
Brachypodium KQK15590
Barley HORVU5Hr1G015050.6 , HORVU5Hr1G015050.4 , HORVU5Hr1G015050.2 , HORVU5Hr1G015050.3 , HORVU5Hr1G015050.1
Wheat TraesCS5A02G059800 , TraesCS5A02G059800 , TraesCS5D02G071300 , TraesCS5D02G071300
Populus -


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cDNA sequences
Sobic.008G153200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G045700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polynucleotide phosphorylase, putative, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
2 Sobic.007G116100 thioredoxin, putative, expressed -
3 Sobic.001G228300 SAP domain containing protein, expressed -
4 Sobic.007G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
5 Sobic.009G251000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SET domain containing protein, expressed -
6 Sobic.002G158800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -
7 Sobic.004G338300 rho termination factor, N-terminal domain containing protein, expressed -
8 Sobic.004G342100 expressed protein -
9 Sobic.007G015300 calreticulin family protein, expressed -
10 Sobic.007G171800 RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
11 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
12 Sobic.004G269600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
13 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
14 Sobic.002G199000 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed K00592: [ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase
15 Sobic.001G099000 expressed protein -
16 Sobic.007G090537 - K10956: protein transport protein SEC61 subunit alpha
17 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
18 Sobic.005G110481 - -
19 Sobic.006G110200 CRS1/YhbY domain containing protein, expressed -
20 Sobic.010G035200 whirly transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic008G153200 Sobic008G153200 Sobic002G045700 Sobic002G045700 Sobic008G153200--Sobic002G045700 Sobic007G116100 Sobic007G116100 Sobic008G153200--Sobic007G116100 Sobic001G228300 Sobic001G228300 Sobic008G153200--Sobic001G228300 Sobic007G155600 Sobic007G155600 Sobic008G153200--Sobic007G155600 Sobic009G251000 Sobic009G251000 Sobic008G153200--Sobic009G251000 Sobic002G158800 Sobic002G158800 Sobic008G153200--Sobic002G158800 Sobic004G338300 Sobic004G338300 Sobic008G153200--Sobic004G338300 Sobic004G342100 Sobic004G342100 Sobic008G153200--Sobic004G342100 Sobic007G015300 Sobic007G015300 Sobic008G153200--Sobic007G015300 Sobic002G140000 Sobic002G140000 Sobic002G045700--Sobic002G140000 Sobic002G045700--Sobic004G338300 Sobic002G045700--Sobic001G228300 Sobic002G045700--Sobic009G251000 Sobic002G045700--Sobic007G015300 Sobic010G027200 Sobic010G027200 Sobic002G045700--Sobic010G027200 Sobic006G110200 Sobic006G110200 Sobic002G045700--Sobic006G110200 Sobic002G045700--Sobic007G116100 Sobic010G011200 Sobic010G011200 Sobic002G045700--Sobic010G011200 Sobic007G116100--Sobic010G027200 Sobic001G281500 Sobic001G281500 Sobic007G116100--Sobic001G281500 Sobic007G116100--Sobic002G140000 Sobic006G263800 Sobic006G263800 Sobic007G116100--Sobic006G263800 Sobic001G099000 Sobic001G099000 Sobic007G116100--Sobic001G099000 Sobic007G116100--Sobic007G015300 Sobic006G237100 Sobic006G237100 Sobic007G116100--Sobic006G237100 Sobic007G116100--Sobic004G338300 Sobic005G022800 Sobic005G022800 Sobic007G116100--Sobic005G022800 Sobic001G395300 Sobic001G395300 Sobic001G228300--Sobic001G395300 Sobic001G228300--Sobic002G045700 Sobic001G138000 Sobic001G138000 Sobic001G228300--Sobic001G138000 Sobic001G228300--Sobic006G263800 Sobic003G392000 Sobic003G392000 Sobic001G228300--Sobic003G392000 Sobic001G228300--Sobic007G116100 Sobic001G228300--Sobic002G140000 Sobic003G283100 Sobic003G283100 Sobic001G228300--Sobic003G283100 Sobic001G228300--Sobic006G110200 Sobic009G042200 Sobic009G042200 Sobic007G155600--Sobic009G042200 Sobic007G171800 Sobic007G171800 Sobic007G155600--Sobic007G171800 Sobic005G110481 Sobic005G110481 Sobic007G155600--Sobic005G110481 Sobic002G297400 Sobic002G297400 Sobic007G155600--Sobic002G297400 Sobic001G148200 Sobic001G148200 Sobic007G155600--Sobic001G148200 Sobic006G166000 Sobic006G166000 Sobic007G155600--Sobic006G166000 Sobic002G013700 Sobic002G013700 Sobic007G155600--Sobic002G013700 Sobic007G155600--Sobic002G158800 Sobic007G101300 Sobic007G101300 Sobic007G155600--Sobic007G101300 Sobic009G104700 Sobic009G104700 Sobic009G251000--Sobic009G104700 Sobic009G251000--Sobic002G140000 Sobic009G251000--Sobic005G110481 Sobic009G251000--Sobic010G011200 Sobic009G251000--Sobic007G015300 Sobic009G251000--Sobic010G027200 Sobic009G251000--Sobic006G237100 Sobic007G090537 Sobic007G090537 Sobic009G251000--Sobic007G090537 Sobic009G251000--Sobic002G045700 Sobic002G158800--Sobic001G099000 Sobic001G391400 Sobic001G391400 Sobic002G158800--Sobic001G391400 Sobic003G324700 Sobic003G324700 Sobic002G158800--Sobic003G324700 Sobic002G158800--Sobic007G015300 Sobic002G158800--Sobic005G110481 Sobic001G122400 Sobic001G122400 Sobic002G158800--Sobic001G122400 Sobic002G158800--Sobic004G338300 Sobic005G184300 Sobic005G184300 Sobic002G158800--Sobic005G184300 Sobic002G158800--Sobic009G104700 Sobic004G338300--Sobic002G158800 Sobic004G338300--Sobic007G015300 Sobic004G338300--Sobic001G099000 Sobic004G338300--Sobic010G027200 Sobic004G338300--Sobic007G116100 Sobic010G035200 Sobic010G035200 Sobic004G338300--Sobic010G035200 Sobic004G338300--Sobic009G104700 Sobic004G338300--Sobic010G011200 Sobic004G338300--Sobic002G013700 Sobic004G342100--Sobic008G153200 Sobic002G199000 Sobic002G199000 Sobic004G342100--Sobic002G199000 Sobic002G190100 Sobic002G190100 Sobic004G342100--Sobic002G190100 Sobic004G342100--Sobic007G171800 Sobic004G253800 Sobic004G253800 Sobic004G342100--Sobic004G253800 Sobic006G204600 Sobic006G204600 Sobic004G342100--Sobic006G204600 Sobic009G187100 Sobic009G187100 Sobic004G342100--Sobic009G187100 Sobic004G342100--Sobic007G155600 Sobic002G306201 Sobic002G306201 Sobic004G342100--Sobic002G306201 Sobic007G015300--Sobic001G099000 Sobic007G015300--Sobic002G158800 Sobic007G015300--Sobic004G338300 Sobic007G015300--Sobic010G027200 Sobic007G015300--Sobic002G140000 Sobic007G015300--Sobic005G184300 Sobic001G375000 Sobic001G375000 Sobic007G015300--Sobic001G375000 Sobic007G015300--Sobic007G116100 Sobic003G128400 Sobic003G128400 Sobic007G015300--Sobic003G128400
Octagon: transcription factors


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