Gene annotation
Transcriptome id Sobic.004G342100.1
Synonym Sb04g036950
Functional annotation expressed protein
UniProt C5XVT8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27240 : Cytochrome C1 family
RAP-DB (Rice) LOC_Os02g56940.2 : expressed protein
MaizeGDB (Corn) Zm00025a022584
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G153200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase, putative, expressed -
2 Sobic.002G199000 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed K00592: [ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase
3 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.007G171800 RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
5 Sobic.004G253800 - -
6 Sobic.006G204600 pentatricopeptide, putative, expressed -
7 Sobic.009G187100 expressed protein -
8 Sobic.007G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
9 Sobic.002G306201 - -
10 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
11 Sobic.001G484300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@YGGT family protein, putative, expressed K02221: YggT family protein
12 Sobic.004G255500 SET domain-containing protein, putative, expressed -
13 Sobic.010G219500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
14 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
15 Sobic.001G088700 DCL, chloroplast precursor, putative, expressed -
16 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
17 Sobic.002G013700 PPR2, putative, expressed -
18 Sobic.008G072300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.001G148200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@antitermination NusB domain-containing protein, putative, expressed -
20 Sobic.002G158800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G342100 Sobic004G342100 Sobic008G153200 Sobic008G153200 Sobic004G342100--Sobic008G153200 Sobic002G199000 Sobic002G199000 Sobic004G342100--Sobic002G199000 Sobic002G190100 Sobic002G190100 Sobic004G342100--Sobic002G190100 Sobic007G171800 Sobic007G171800 Sobic004G342100--Sobic007G171800 Sobic004G253800 Sobic004G253800 Sobic004G342100--Sobic004G253800 Sobic006G204600 Sobic006G204600 Sobic004G342100--Sobic006G204600 Sobic009G187100 Sobic009G187100 Sobic004G342100--Sobic009G187100 Sobic007G155600 Sobic007G155600 Sobic004G342100--Sobic007G155600 Sobic002G306201 Sobic002G306201 Sobic004G342100--Sobic002G306201 Sobic002G045700 Sobic002G045700 Sobic008G153200--Sobic002G045700 Sobic007G116100 Sobic007G116100 Sobic008G153200--Sobic007G116100 Sobic001G228300 Sobic001G228300 Sobic008G153200--Sobic001G228300 Sobic008G153200--Sobic007G155600 Sobic009G251000 Sobic009G251000 Sobic008G153200--Sobic009G251000 Sobic002G158800 Sobic002G158800 Sobic008G153200--Sobic002G158800 Sobic004G338300 Sobic004G338300 Sobic008G153200--Sobic004G338300 Sobic008G153200--Sobic004G342100 Sobic007G015300 Sobic007G015300 Sobic008G153200--Sobic007G015300 Sobic004G269600 Sobic004G269600 Sobic002G199000--Sobic004G269600 Sobic002G199000--Sobic006G204600 Sobic002G199000--Sobic007G155600 Sobic004G179200 Sobic004G179200 Sobic002G199000--Sobic004G179200 Sobic006G280800 Sobic006G280800 Sobic002G199000--Sobic006G280800 Sobic010G279100 Sobic010G279100 Sobic002G199000--Sobic010G279100 Sobic003G324700 Sobic003G324700 Sobic002G199000--Sobic003G324700 Sobic001G054100 Sobic001G054100 Sobic002G199000--Sobic001G054100 Sobic005G143500 Sobic005G143500 Sobic002G199000--Sobic005G143500 Sobic006G025700 Sobic006G025700 Sobic002G190100--Sobic006G025700 Sobic006G263800 Sobic006G263800 Sobic002G190100--Sobic006G263800 Sobic008G130700 Sobic008G130700 Sobic002G190100--Sobic008G130700 Sobic002G242600 Sobic002G242600 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic002G190100--Sobic004G044000 Sobic002G190100--Sobic004G253800 Sobic009G059100 Sobic009G059100 Sobic002G190100--Sobic009G059100 Sobic001G120000 Sobic001G120000 Sobic002G190100--Sobic001G120000 Sobic010G011200 Sobic010G011200 Sobic007G171800--Sobic010G011200 Sobic005G110481 Sobic005G110481 Sobic007G171800--Sobic005G110481 Sobic002G251400 Sobic002G251400 Sobic007G171800--Sobic002G251400 Sobic002G131700 Sobic002G131700 Sobic007G171800--Sobic002G131700 Sobic009G042200 Sobic009G042200 Sobic007G171800--Sobic009G042200 Sobic001G148200 Sobic001G148200 Sobic007G171800--Sobic001G148200 Sobic007G171800--Sobic003G324700 Sobic007G034500 Sobic007G034500 Sobic007G171800--Sobic007G034500 Sobic010G035200 Sobic010G035200 Sobic007G171800--Sobic010G035200 Sobic005G200600 Sobic005G200600 Sobic004G253800--Sobic005G200600 Sobic003G157500 Sobic003G157500 Sobic004G253800--Sobic003G157500 Sobic005G020200 Sobic005G020200 Sobic004G253800--Sobic005G020200 Sobic001G188600 Sobic001G188600 Sobic004G253800--Sobic001G188600 Sobic004G253800--Sobic006G025700 Sobic004G253800--Sobic009G059100 Sobic009G001500 Sobic009G001500 Sobic004G253800--Sobic009G001500 Sobic001G357200 Sobic001G357200 Sobic004G253800--Sobic001G357200 Sobic006G114300 Sobic006G114300 Sobic004G253800--Sobic006G114300 Sobic006G204600--Sobic002G199000 Sobic002G331100 Sobic002G331100 Sobic006G204600--Sobic002G331100 Sobic006G204600--Sobic010G279100 Sobic004G357300 Sobic004G357300 Sobic006G204600--Sobic004G357300 Sobic010G002000 Sobic010G002000 Sobic006G204600--Sobic010G002000 Sobic004G342500 Sobic004G342500 Sobic006G204600--Sobic004G342500 Sobic001G455500 Sobic001G455500 Sobic006G204600--Sobic001G455500 Sobic001G001300 Sobic001G001300 Sobic006G204600--Sobic001G001300 Sobic006G204600--Sobic001G054100 Sobic009G187100--Sobic007G171800 Sobic001G240000 Sobic001G240000 Sobic009G187100--Sobic001G240000 Sobic001G040000 Sobic001G040000 Sobic009G187100--Sobic001G040000 Sobic003G328200 Sobic003G328200 Sobic009G187100--Sobic003G328200 Sobic010G219500 Sobic010G219500 Sobic009G187100--Sobic010G219500 Sobic003G386300 Sobic003G386300 Sobic009G187100--Sobic003G386300 Sobic009G187100--Sobic002G251400 Sobic003G295800 Sobic003G295800 Sobic009G187100--Sobic003G295800 Sobic004G335800 Sobic004G335800 Sobic009G187100--Sobic004G335800 Sobic007G155600--Sobic009G042200 Sobic007G155600--Sobic007G171800 Sobic007G155600--Sobic005G110481 Sobic002G297400 Sobic002G297400 Sobic007G155600--Sobic002G297400 Sobic007G155600--Sobic001G148200 Sobic006G166000 Sobic006G166000 Sobic007G155600--Sobic006G166000 Sobic002G013700 Sobic002G013700 Sobic007G155600--Sobic002G013700 Sobic007G155600--Sobic002G158800 Sobic007G101300 Sobic007G101300 Sobic007G155600--Sobic007G101300 Sobic002G306201--Sobic010G219500 Sobic009G098100 Sobic009G098100 Sobic002G306201--Sobic009G098100 Sobic002G306201--Sobic003G295800 Sobic001G069500 Sobic001G069500 Sobic002G306201--Sobic001G069500 Sobic002G306201--Sobic007G171800 Sobic002G306201--Sobic001G188600 Sobic008G030000 Sobic008G030000 Sobic002G306201--Sobic008G030000 Sobic002G306201--Sobic004G253800 Sobic010G215500 Sobic010G215500 Sobic002G306201--Sobic010G215500
Octagon: transcription factors


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