Gene annotation
Transcriptome id Sobic.002G306201.1
Synonym -
Functional annotation -
UniProt A0A1W0W6M6
Pfam PF00254
Panther DB PTHR10516 PTHR10516:SF178
NCBI CDD KOG0544; FKBP-type peptidyl-prolyl cis-trans isomerase
KEGG Orthology -
Gene Ontology GO:0006457; protein folding


Orthologs (automatic annotation)
TAIR AT3G60370 : FKBP-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os07g30800.1 : immunophilin, putative, expressed
MaizeGDB (Corn) Zm00025a048085
Brachypodium KQK16169
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G219500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
2 Sobic.009G098100 T-complex protein, putative, expressed -
3 Sobic.003G295800 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
4 Sobic.001G069500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
5 Sobic.007G171800 RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
6 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
7 Sobic.008G030000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@elongation factor P, putative, expressed K02356: elongation factor P
8 Sobic.004G253800 - -
9 Sobic.010G215500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1
10 Sobic.004G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed -
11 Sobic.004G019300 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
12 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
13 Sobic.006G114300 pentatricopeptide, putative, expressed -
14 Sobic.010G013700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@high-affinity nickel-transport family protein, putative, expressed -
15 Sobic.003G383600 - -
16 Sobic.005G110481 - -
17 Sobic.010G012900 superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
18 Sobic.001G453300 50S ribosomal protein L15, chloroplast precursor, putative, expressed K02876: RP-L15, MRPL15, large subunit ribosomal protein L15
19 Sobic.001G357200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
20 Sobic.009G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsDegp6 - Putative Deg protease homologue, expressed -


Gene co-expression network
sample Sobic002G306201 Sobic002G306201 Sobic010G219500 Sobic010G219500 Sobic002G306201--Sobic010G219500 Sobic009G098100 Sobic009G098100 Sobic002G306201--Sobic009G098100 Sobic003G295800 Sobic003G295800 Sobic002G306201--Sobic003G295800 Sobic001G069500 Sobic001G069500 Sobic002G306201--Sobic001G069500 Sobic007G171800 Sobic007G171800 Sobic002G306201--Sobic007G171800 Sobic001G188600 Sobic001G188600 Sobic002G306201--Sobic001G188600 Sobic008G030000 Sobic008G030000 Sobic002G306201--Sobic008G030000 Sobic004G253800 Sobic004G253800 Sobic002G306201--Sobic004G253800 Sobic010G215500 Sobic010G215500 Sobic002G306201--Sobic010G215500 Sobic010G219500--Sobic003G295800 Sobic010G219500--Sobic002G306201 Sobic010G219500--Sobic009G098100 Sobic010G219500--Sobic004G253800 Sobic010G219500--Sobic007G171800 Sobic009G001500 Sobic009G001500 Sobic010G219500--Sobic009G001500 Sobic004G191200 Sobic004G191200 Sobic010G219500--Sobic004G191200 Sobic010G219500--Sobic008G030000 Sobic007G034500 Sobic007G034500 Sobic010G219500--Sobic007G034500 Sobic009G098100--Sobic001G069500 Sobic009G098100--Sobic003G295800 Sobic009G098100--Sobic001G188600 Sobic001G453300 Sobic001G453300 Sobic009G098100--Sobic001G453300 Sobic001G383900 Sobic001G383900 Sobic009G098100--Sobic001G383900 Sobic001G027600 Sobic001G027600 Sobic009G098100--Sobic001G027600 Sobic009G098100--Sobic008G030000 Sobic004G076000 Sobic004G076000 Sobic009G098100--Sobic004G076000 Sobic002G020100 Sobic002G020100 Sobic009G098100--Sobic002G020100 Sobic007G013400 Sobic007G013400 Sobic003G295800--Sobic007G013400 Sobic003G295800--Sobic009G001500 Sobic001G040000 Sobic001G040000 Sobic003G295800--Sobic001G040000 Sobic004G317900 Sobic004G317900 Sobic003G295800--Sobic004G317900 Sobic003G295800--Sobic009G098100 Sobic001G017000 Sobic001G017000 Sobic003G295800--Sobic001G017000 Sobic003G295800--Sobic001G027600 Sobic003G295800--Sobic001G453300 Sobic003G383500 Sobic003G383500 Sobic003G295800--Sobic003G383500 Sobic001G069500--Sobic009G098100 Sobic001G069500--Sobic001G188600 Sobic007G211100 Sobic007G211100 Sobic001G069500--Sobic007G211100 Sobic001G069500--Sobic003G295800 Sobic003G383600 Sobic003G383600 Sobic001G069500--Sobic003G383600 Sobic008G123600 Sobic008G123600 Sobic001G069500--Sobic008G123600 Sobic001G069500--Sobic009G001500 Sobic001G069500--Sobic008G030000 Sobic001G069500--Sobic007G013400 Sobic010G011200 Sobic010G011200 Sobic007G171800--Sobic010G011200 Sobic005G110481 Sobic005G110481 Sobic007G171800--Sobic005G110481 Sobic002G251400 Sobic002G251400 Sobic007G171800--Sobic002G251400 Sobic002G131700 Sobic002G131700 Sobic007G171800--Sobic002G131700 Sobic009G042200 Sobic009G042200 Sobic007G171800--Sobic009G042200 Sobic001G148200 Sobic001G148200 Sobic007G171800--Sobic001G148200 Sobic003G324700 Sobic003G324700 Sobic007G171800--Sobic003G324700 Sobic007G171800--Sobic007G034500 Sobic010G035200 Sobic010G035200 Sobic007G171800--Sobic010G035200 Sobic001G188600--Sobic001G069500 Sobic006G114300 Sobic006G114300 Sobic001G188600--Sobic006G114300 Sobic001G357200 Sobic001G357200 Sobic001G188600--Sobic001G357200 Sobic001G188600--Sobic009G098100 Sobic010G012900 Sobic010G012900 Sobic001G188600--Sobic010G012900 Sobic004G109000 Sobic004G109000 Sobic001G188600--Sobic004G109000 Sobic001G188600--Sobic007G211100 Sobic001G188600--Sobic004G253800 Sobic001G188600--Sobic008G030000 Sobic008G030000--Sobic003G295800 Sobic008G030000--Sobic009G098100 Sobic008G030000--Sobic009G001500 Sobic008G030000--Sobic003G383600 Sobic008G030000--Sobic001G453300 Sobic008G030000--Sobic001G357200 Sobic007G185100 Sobic007G185100 Sobic008G030000--Sobic007G185100 Sobic008G030000--Sobic001G383900 Sobic008G030000--Sobic007G013400 Sobic005G200600 Sobic005G200600 Sobic004G253800--Sobic005G200600 Sobic003G157500 Sobic003G157500 Sobic004G253800--Sobic003G157500 Sobic005G020200 Sobic005G020200 Sobic004G253800--Sobic005G020200 Sobic004G253800--Sobic001G188600 Sobic006G025700 Sobic006G025700 Sobic004G253800--Sobic006G025700 Sobic009G059100 Sobic009G059100 Sobic004G253800--Sobic009G059100 Sobic004G253800--Sobic009G001500 Sobic004G253800--Sobic001G357200 Sobic004G253800--Sobic006G114300 Sobic010G215500--Sobic003G295800 Sobic010G215500--Sobic007G185100 Sobic003G328200 Sobic003G328200 Sobic010G215500--Sobic003G328200 Sobic010G215500--Sobic003G383600 Sobic010G215500--Sobic007G013400 Sobic002G297900 Sobic002G297900 Sobic010G215500--Sobic002G297900 Sobic010G215500--Sobic004G076000 Sobic010G215500--Sobic004G317900 Sobic004G335800 Sobic004G335800 Sobic010G215500--Sobic004G335800
Octagon: transcription factors


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