Gene annotation
Transcriptome id Sobic.010G013700.1
Synonym Sb10g001370
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
high-affinity nickel-transport family protein, putative, expressed
UniProt C5Z2V1
Pfam -
Panther DB PTHR33876 PTHR33876:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G16800 : high-affinity nickel-transport family protein
RAP-DB (Rice) LOC_Os06g02580.1 : high-affinity nickel-transport family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK19814
Barley -
Wheat TraesCS7A02G049500 , TraesCS4A02G435600 , TraesCS7D02G044600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G164100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
2 Sobic.010G035200 whirly transcription factor domain containing protein, expressed -
3 Sobic.010G215500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1
4 Sobic.004G326500 PAP fibrillin family domain containing protein, expressed -
5 Sobic.007G171800 RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
6 Sobic.002G198000 CRR6, putative, expressed -
7 Sobic.001G527100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
8 Sobic.004G019300 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
9 Sobic.002G306201 - -
10 Sobic.004G343000 RNA recognition motif containing protein, putative, expressed -
11 Sobic.003G295800 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
12 Sobic.001G240000 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
13 Sobic.002G251400 expressed protein -
14 Sobic.009G130800 tat pathway signal sequence family protein, expressed -
15 Sobic.003G328200 thylakoid lumenal 20 kDa protein, putative, expressed -
16 Sobic.003G386300 expressed protein -
17 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
18 Sobic.010G219500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
19 Sobic.004G335800 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9
20 Sobic.003G324700 expressed protein -


Gene co-expression network
sample Sobic010G013700 Sobic010G013700 Sobic004G164100 Sobic004G164100 Sobic010G013700--Sobic004G164100 Sobic010G035200 Sobic010G035200 Sobic010G013700--Sobic010G035200 Sobic010G215500 Sobic010G215500 Sobic010G013700--Sobic010G215500 Sobic004G326500 Sobic004G326500 Sobic010G013700--Sobic004G326500 Sobic007G171800 Sobic007G171800 Sobic010G013700--Sobic007G171800 Sobic002G198000 Sobic002G198000 Sobic010G013700--Sobic002G198000 Sobic001G527100 Sobic001G527100 Sobic010G013700--Sobic001G527100 Sobic004G019300 Sobic004G019300 Sobic010G013700--Sobic004G019300 Sobic002G306201 Sobic002G306201 Sobic010G013700--Sobic002G306201 Sobic004G164100--Sobic002G198000 Sobic004G164100--Sobic001G527100 Sobic003G386300 Sobic003G386300 Sobic004G164100--Sobic003G386300 Sobic002G251400 Sobic002G251400 Sobic004G164100--Sobic002G251400 Sobic001G240000 Sobic001G240000 Sobic004G164100--Sobic001G240000 Sobic001G122400 Sobic001G122400 Sobic004G164100--Sobic001G122400 Sobic010G095200 Sobic010G095200 Sobic004G164100--Sobic010G095200 Sobic004G335800 Sobic004G335800 Sobic004G164100--Sobic004G335800 Sobic004G164100--Sobic004G326500 Sobic001G469933 Sobic001G469933 Sobic010G035200--Sobic001G469933 Sobic003G324700 Sobic003G324700 Sobic010G035200--Sobic003G324700 Sobic010G035200--Sobic007G171800 Sobic002G131700 Sobic002G131700 Sobic010G035200--Sobic002G131700 Sobic001G083100 Sobic001G083100 Sobic010G035200--Sobic001G083100 Sobic010G035200--Sobic001G122400 Sobic008G039600 Sobic008G039600 Sobic010G035200--Sobic008G039600 Sobic009G131600 Sobic009G131600 Sobic010G035200--Sobic009G131600 Sobic010G035200--Sobic004G164100 Sobic003G295800 Sobic003G295800 Sobic010G215500--Sobic003G295800 Sobic007G185100 Sobic007G185100 Sobic010G215500--Sobic007G185100 Sobic003G328200 Sobic003G328200 Sobic010G215500--Sobic003G328200 Sobic003G383600 Sobic003G383600 Sobic010G215500--Sobic003G383600 Sobic007G013400 Sobic007G013400 Sobic010G215500--Sobic007G013400 Sobic002G297900 Sobic002G297900 Sobic010G215500--Sobic002G297900 Sobic004G076000 Sobic004G076000 Sobic010G215500--Sobic004G076000 Sobic004G317900 Sobic004G317900 Sobic010G215500--Sobic004G317900 Sobic010G215500--Sobic004G335800 Sobic003G275200 Sobic003G275200 Sobic004G326500--Sobic003G275200 Sobic004G055000 Sobic004G055000 Sobic004G326500--Sobic004G055000 Sobic004G326500--Sobic002G198000 Sobic004G326500--Sobic004G164100 Sobic002G267900 Sobic002G267900 Sobic004G326500--Sobic002G267900 Sobic004G326500--Sobic001G527100 Sobic008G172700 Sobic008G172700 Sobic004G326500--Sobic008G172700 Sobic004G343000 Sobic004G343000 Sobic004G326500--Sobic004G343000 Sobic004G326500--Sobic001G122400 Sobic010G011200 Sobic010G011200 Sobic007G171800--Sobic010G011200 Sobic005G110481 Sobic005G110481 Sobic007G171800--Sobic005G110481 Sobic007G171800--Sobic002G251400 Sobic007G171800--Sobic002G131700 Sobic009G042200 Sobic009G042200 Sobic007G171800--Sobic009G042200 Sobic001G148200 Sobic001G148200 Sobic007G171800--Sobic001G148200 Sobic007G171800--Sobic003G324700 Sobic007G034500 Sobic007G034500 Sobic007G171800--Sobic007G034500 Sobic007G171800--Sobic010G035200 Sobic002G198000--Sobic004G164100 Sobic002G198000--Sobic001G527100 Sobic002G198000--Sobic001G122400 Sobic002G198000--Sobic003G386300 Sobic002G198000--Sobic001G240000 Sobic002G198000--Sobic004G335800 Sobic002G198000--Sobic001G469933 Sobic002G198000--Sobic002G251400 Sobic002G198000--Sobic010G095200 Sobic001G527100--Sobic001G240000 Sobic001G527100--Sobic001G122400 Sobic001G527100--Sobic002G198000 Sobic001G527100--Sobic004G335800 Sobic001G527100--Sobic003G386300 Sobic001G527100--Sobic004G164100 Sobic001G391400 Sobic001G391400 Sobic001G527100--Sobic001G391400 Sobic001G040000 Sobic001G040000 Sobic001G527100--Sobic001G040000 Sobic001G527100--Sobic003G328200 Sobic004G019300--Sobic007G185100 Sobic004G019300--Sobic010G215500 Sobic003G068300 Sobic003G068300 Sobic004G019300--Sobic003G068300 Sobic004G019300--Sobic003G295800 Sobic004G044200 Sobic004G044200 Sobic004G019300--Sobic004G044200 Sobic004G019300--Sobic007G013400 Sobic004G019300--Sobic003G328200 Sobic008G030000 Sobic008G030000 Sobic004G019300--Sobic008G030000 Sobic009G001500 Sobic009G001500 Sobic004G019300--Sobic009G001500 Sobic010G219500 Sobic010G219500 Sobic002G306201--Sobic010G219500 Sobic009G098100 Sobic009G098100 Sobic002G306201--Sobic009G098100 Sobic002G306201--Sobic003G295800 Sobic001G069500 Sobic001G069500 Sobic002G306201--Sobic001G069500 Sobic002G306201--Sobic007G171800 Sobic001G188600 Sobic001G188600 Sobic002G306201--Sobic001G188600 Sobic002G306201--Sobic008G030000 Sobic004G253800 Sobic004G253800 Sobic002G306201--Sobic004G253800 Sobic002G306201--Sobic010G215500
Octagon: transcription factors


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