Gene annotation
Transcriptome id Sobic.010G035200.1
Synonym WHY3, ATWHY3, PTAC11, Sb10g003170
Functional annotation whirly transcription factor domain containing protein, expressed
UniProt C6JRV8 , C6JRV7 , C5Z3X1
Pfam PF08536
Panther DB PTHR31745 PTHR31745:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02740 : ssDNA-binding transcriptional regulator
RAP-DB (Rice) LOC_Os06g05350.1 : whirly transcription factor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041500
Brachypodium KQK19881
Barley HORVU7Hr1G021180.2 , HORVU7Hr1G021180.1 , HORVU7Hr1G021180.3
Wheat TraesCS7D02G091500 , TraesCS4A02G395700 , TraesCS7A02G095300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
2 Sobic.003G324700 expressed protein -
3 Sobic.007G171800 RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
4 Sobic.002G131700 RNA recognition motif containing protein, putative, expressed -
5 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
6 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
7 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
8 Sobic.009G131600 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
9 Sobic.004G164100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
11 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
12 Sobic.002G198000 CRR6, putative, expressed -
13 Sobic.004G179200 expressed protein -
14 Sobic.005G143500 aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed K02434: gatB, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B
15 Sobic.003G271900 expressed protein -
16 Sobic.003G444500 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
17 Sobic.002G272100 expressed protein -
18 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
19 Sobic.002G158800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -
20 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -


Gene co-expression network
sample Sobic010G035200 Sobic010G035200 Sobic001G469933 Sobic001G469933 Sobic010G035200--Sobic001G469933 Sobic003G324700 Sobic003G324700 Sobic010G035200--Sobic003G324700 Sobic007G171800 Sobic007G171800 Sobic010G035200--Sobic007G171800 Sobic002G131700 Sobic002G131700 Sobic010G035200--Sobic002G131700 Sobic001G083100 Sobic001G083100 Sobic010G035200--Sobic001G083100 Sobic001G122400 Sobic001G122400 Sobic010G035200--Sobic001G122400 Sobic008G039600 Sobic008G039600 Sobic010G035200--Sobic008G039600 Sobic009G131600 Sobic009G131600 Sobic010G035200--Sobic009G131600 Sobic004G164100 Sobic004G164100 Sobic010G035200--Sobic004G164100 Sobic001G469933--Sobic001G122400 Sobic001G368500 Sobic001G368500 Sobic001G469933--Sobic001G368500 Sobic001G469933--Sobic003G324700 Sobic003G077400 Sobic003G077400 Sobic001G469933--Sobic003G077400 Sobic006G055800 Sobic006G055800 Sobic001G469933--Sobic006G055800 Sobic003G432500 Sobic003G432500 Sobic001G469933--Sobic003G432500 Sobic004G335800 Sobic004G335800 Sobic001G469933--Sobic004G335800 Sobic001G469933--Sobic001G083100 Sobic005G110400 Sobic005G110400 Sobic001G469933--Sobic005G110400 Sobic003G324700--Sobic001G122400 Sobic003G324700--Sobic001G368500 Sobic003G324700--Sobic001G469933 Sobic003G324700--Sobic004G335800 Sobic003G324700--Sobic006G055800 Sobic002G152800 Sobic002G152800 Sobic003G324700--Sobic002G152800 Sobic003G386300 Sobic003G386300 Sobic003G324700--Sobic003G386300 Sobic003G324700--Sobic003G432500 Sobic001G527100 Sobic001G527100 Sobic003G324700--Sobic001G527100 Sobic010G011200 Sobic010G011200 Sobic007G171800--Sobic010G011200 Sobic005G110481 Sobic005G110481 Sobic007G171800--Sobic005G110481 Sobic002G251400 Sobic002G251400 Sobic007G171800--Sobic002G251400 Sobic007G171800--Sobic002G131700 Sobic009G042200 Sobic009G042200 Sobic007G171800--Sobic009G042200 Sobic001G148200 Sobic001G148200 Sobic007G171800--Sobic001G148200 Sobic007G171800--Sobic003G324700 Sobic007G034500 Sobic007G034500 Sobic007G171800--Sobic007G034500 Sobic007G171800--Sobic010G035200 Sobic004G179200 Sobic004G179200 Sobic002G131700--Sobic004G179200 Sobic003G330100 Sobic003G330100 Sobic002G131700--Sobic003G330100 Sobic006G111600 Sobic006G111600 Sobic002G131700--Sobic006G111600 Sobic002G131700--Sobic007G171800 Sobic005G002900 Sobic005G002900 Sobic002G131700--Sobic005G002900 Sobic002G131700--Sobic010G035200 Sobic003G221700 Sobic003G221700 Sobic002G131700--Sobic003G221700 Sobic002G131700--Sobic001G469933 Sobic002G131700--Sobic001G083100 Sobic001G083100--Sobic005G002900 Sobic009G148500 Sobic009G148500 Sobic001G083100--Sobic009G148500 Sobic001G083100--Sobic008G039600 Sobic001G083100--Sobic001G469933 Sobic001G083100--Sobic006G055800 Sobic002G272100 Sobic002G272100 Sobic001G083100--Sobic002G272100 Sobic003G372900 Sobic003G372900 Sobic001G083100--Sobic003G372900 Sobic001G054100 Sobic001G054100 Sobic001G083100--Sobic001G054100 Sobic008G073100 Sobic008G073100 Sobic001G083100--Sobic008G073100 Sobic001G122400--Sobic003G386300 Sobic001G122400--Sobic004G335800 Sobic001G122400--Sobic001G527100 Sobic001G122400--Sobic003G324700 Sobic001G122400--Sobic001G469933 Sobic001G240000 Sobic001G240000 Sobic001G122400--Sobic001G240000 Sobic001G122400--Sobic001G368500 Sobic002G198000 Sobic002G198000 Sobic001G122400--Sobic002G198000 Sobic001G391400 Sobic001G391400 Sobic001G122400--Sobic001G391400 Sobic005G143500 Sobic005G143500 Sobic008G039600--Sobic005G143500 Sobic008G039600--Sobic001G083100 Sobic006G106400 Sobic006G106400 Sobic008G039600--Sobic006G106400 Sobic002G401800 Sobic002G401800 Sobic008G039600--Sobic002G401800 Sobic008G039600--Sobic002G272100 Sobic010G002000 Sobic010G002000 Sobic008G039600--Sobic010G002000 Sobic008G039600--Sobic001G368500 Sobic003G094350 Sobic003G094350 Sobic008G039600--Sobic003G094350 Sobic002G181000 Sobic002G181000 Sobic008G039600--Sobic002G181000 Sobic009G131600--Sobic006G055800 Sobic009G131600--Sobic007G171800 Sobic009G131600--Sobic010G035200 Sobic009G131600--Sobic003G324700 Sobic009G131600--Sobic002G131700 Sobic003G128400 Sobic003G128400 Sobic009G131600--Sobic003G128400 Sobic007G090400 Sobic007G090400 Sobic009G131600--Sobic007G090400 Sobic009G131600--Sobic005G002900 Sobic002G056800 Sobic002G056800 Sobic009G131600--Sobic002G056800 Sobic004G164100--Sobic002G198000 Sobic004G164100--Sobic001G527100 Sobic004G164100--Sobic003G386300 Sobic004G164100--Sobic002G251400 Sobic004G164100--Sobic001G240000 Sobic004G164100--Sobic001G122400 Sobic010G095200 Sobic010G095200 Sobic004G164100--Sobic010G095200 Sobic004G164100--Sobic004G335800 Sobic004G326500 Sobic004G326500 Sobic004G164100--Sobic004G326500
Octagon: transcription factors


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