Gene annotation
Transcriptome id Sobic.004G076000.1
Synonym Sb04g006270,
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Protein peroxiredoxin-5 (Os) (PubMedID : 27208977)
peroxiredoxin, putative, expressed
UniProt C5XXD7
Pfam PF00578
Panther DB PTHR10430 PTHR10430:SF16
NCBI CDD KOG0541; Alkyl hydroperoxide reductase/peroxiredoxin
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0016209antioxidant activity


Orthologs (automatic annotation)
TAIR AT3G52960 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os02g09940.1 : peroxiredoxin, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ93793 , KQK17609
Barley HORVU6Hr1G034620.1 , HORVU7Hr1G093020.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G323801 - -
2 Sobic.009G115050 - -
3 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
5 Sobic.001G017000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal protein S6, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
6 Sobic.002G020100 chalcone synthase, putative, expressed -
7 Sobic.005G110436 - -
8 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.003G295800 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
10 Sobic.003G074600 Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
11 Sobic.002G329500 Beta amylase BAM (Zm)(PubMedID : 27208977)@beta-amylase, putative, expressed K01177: beta-amylase
12 Sobic.009G098100 T-complex protein, putative, expressed -
13 Sobic.002G415400 - -
14 Sobic.001G435600 - -
15 Sobic.004G317900 expressed protein -
16 Sobic.007G185100 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
17 Sobic.002G297900 CDGSH iron sulfur domain-containing protein 1, putative, expressed -
18 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
19 Sobic.010G215500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1
20 Sobic.002G351000 fasciclin domain containing protein, expressed -


Gene co-expression network
sample Sobic004G076000 Sobic004G076000 Sobic001G323801 Sobic001G323801 Sobic004G076000--Sobic001G323801 Sobic009G115050 Sobic009G115050 Sobic004G076000--Sobic009G115050 Sobic001G003600 Sobic001G003600 Sobic004G076000--Sobic001G003600 Sobic008G123600 Sobic008G123600 Sobic004G076000--Sobic008G123600 Sobic001G017000 Sobic001G017000 Sobic004G076000--Sobic001G017000 Sobic002G020100 Sobic002G020100 Sobic004G076000--Sobic002G020100 Sobic005G110436 Sobic005G110436 Sobic004G076000--Sobic005G110436 Sobic006G172700 Sobic006G172700 Sobic004G076000--Sobic006G172700 Sobic003G295800 Sobic003G295800 Sobic004G076000--Sobic003G295800 Sobic001G323801--Sobic004G076000 Sobic001G323801--Sobic001G017000 Sobic001G323801--Sobic008G123600 Sobic001G323801--Sobic009G115050 Sobic004G317900 Sobic004G317900 Sobic001G323801--Sobic004G317900 Sobic003G074600 Sobic003G074600 Sobic001G323801--Sobic003G074600 Sobic001G323801--Sobic003G295800 Sobic001G323801--Sobic001G003600 Sobic001G323801--Sobic005G110436 Sobic002G329500 Sobic002G329500 Sobic009G115050--Sobic002G329500 Sobic009G115050--Sobic001G003600 Sobic002G415400 Sobic002G415400 Sobic009G115050--Sobic002G415400 Sobic001G435600 Sobic001G435600 Sobic009G115050--Sobic001G435600 Sobic002G415300 Sobic002G415300 Sobic009G115050--Sobic002G415300 Sobic009G115050--Sobic004G076000 Sobic009G115050--Sobic005G110436 Sobic001G127700 Sobic001G127700 Sobic009G115050--Sobic001G127700 Sobic009G115050--Sobic002G020100 Sobic001G003600--Sobic006G172700 Sobic001G003600--Sobic002G020100 Sobic001G003600--Sobic009G115050 Sobic003G096100 Sobic003G096100 Sobic001G003600--Sobic003G096100 Sobic001G003600--Sobic004G076000 Sobic001G003600--Sobic001G435600 Sobic001G003600--Sobic002G329500 Sobic003G058600 Sobic003G058600 Sobic001G003600--Sobic003G058600 Sobic001G003600--Sobic005G110436 Sobic008G123600--Sobic004G076000 Sobic003G383600 Sobic003G383600 Sobic008G123600--Sobic003G383600 Sobic008G123600--Sobic001G003600 Sobic008G123600--Sobic001G323801 Sobic001G069500 Sobic001G069500 Sobic008G123600--Sobic001G069500 Sobic008G123600--Sobic001G435600 Sobic008G123600--Sobic009G115050 Sobic008G123600--Sobic003G295800 Sobic008G123600--Sobic006G172700 Sobic001G017000--Sobic003G295800 Sobic001G017000--Sobic004G076000 Sobic001G017000--Sobic004G317900 Sobic001G017000--Sobic001G323801 Sobic001G027600 Sobic001G027600 Sobic001G017000--Sobic001G027600 Sobic006G280050 Sobic006G280050 Sobic001G017000--Sobic006G280050 Sobic003G246400 Sobic003G246400 Sobic001G017000--Sobic003G246400 Sobic003G328200 Sobic003G328200 Sobic001G017000--Sobic003G328200 Sobic004G191200 Sobic004G191200 Sobic001G017000--Sobic004G191200 Sobic002G020100--Sobic001G003600 Sobic002G020100--Sobic006G172700 Sobic005G056201 Sobic005G056201 Sobic002G020100--Sobic005G056201 Sobic002G020100--Sobic004G076000 Sobic002G020100--Sobic009G115050 Sobic009G059100 Sobic009G059100 Sobic002G020100--Sobic009G059100 Sobic002G020100--Sobic002G329500 Sobic009G098100 Sobic009G098100 Sobic002G020100--Sobic009G098100 Sobic002G020100--Sobic001G435600 Sobic005G110436--Sobic009G115050 Sobic005G110436--Sobic001G003600 Sobic005G110436--Sobic004G076000 Sobic005G110436--Sobic002G329500 Sobic002G351000 Sobic002G351000 Sobic005G110436--Sobic002G351000 Sobic005G110436--Sobic001G127700 Sobic002G020000 Sobic002G020000 Sobic005G110436--Sobic002G020000 Sobic001G394250 Sobic001G394250 Sobic005G110436--Sobic001G394250 Sobic005G110436--Sobic006G172700 Sobic006G172700--Sobic001G003600 Sobic006G172700--Sobic009G059100 Sobic006G172700--Sobic002G020100 Sobic006G172700--Sobic001G127700 Sobic006G172700--Sobic005G056201 Sobic006G172700--Sobic004G076000 Sobic006G172700--Sobic009G115050 Sobic004G060700 Sobic004G060700 Sobic006G172700--Sobic004G060700 Sobic006G172700--Sobic003G096100 Sobic007G013400 Sobic007G013400 Sobic003G295800--Sobic007G013400 Sobic009G001500 Sobic009G001500 Sobic003G295800--Sobic009G001500 Sobic001G040000 Sobic001G040000 Sobic003G295800--Sobic001G040000 Sobic003G295800--Sobic004G317900 Sobic003G295800--Sobic009G098100 Sobic003G295800--Sobic001G017000 Sobic003G295800--Sobic001G027600 Sobic001G453300 Sobic001G453300 Sobic003G295800--Sobic001G453300 Sobic003G383500 Sobic003G383500 Sobic003G295800--Sobic003G383500
Octagon: transcription factors


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