Gene annotation
Transcriptome id Sobic.005G110436.1
Synonym -
Functional annotation -
UniProt A0A109NDS9 , C6JRI5
Pfam PF14310 PF00933 PF01915
Panther DB PTHR30620 PTHR30620:SF45
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G78060 : Glycosyl hydrolase family protein
RAP-DB (Rice) LOC_Os11g18730.1 : glycosyl hydrolase family 3 protein, putative, expressed
MaizeGDB (Corn) Zm00025a012599 , Zm00025a033705 , Zm00025a033706
Brachypodium KQJ88654 , KQK04062 , PNT63716 , PNT63713 , PNT63712
Barley HORVU4Hr1G069100.1 , HORVU4Hr1G003910.1 , HORVU4Hr1G003910.2 , HORVU4Hr1G069100.10 , HORVU4Hr1G069100.11 , HORVU6Hr1G075010.1 , HORVU6Hr1G075010.7 , HORVU6Hr1G075010.6 , HORVU6Hr1G075010.5 , HORVU4Hr1G012330.13 , HORVU4Hr1G012330.12 , HORVU4Hr1G012330.11 , HORVU4Hr1G012330.10 , HORVU4Hr1G012330.14 , HORVU6Hr1G075010.9 , HORVU6Hr1G075010.3 , HORVU6Hr1G075010.2 , HORVU6Hr1G075010.12 , HORVU4Hr1G069100.6 , HORVU4Hr1G069100.7 , HORVU4Hr1G069100.4 , HORVU4Hr1G069100.5 , HORVU4Hr1G069100.2 , HORVU4Hr1G069100.3 , HORVU4Hr1G069100.8 , HORVU4Hr1G069100.9 , HORVU6Hr1G075010.18 , HORVU6Hr1G075010.13 , HORVU6Hr1G075010.11 , HORVU6Hr1G075010.10 , HORVU6Hr1G075010.17 , HORVU6Hr1G075010.16 , HORVU6Hr1G075010.15 , HORVU6Hr1G075010.14 , HORVU4Hr1G012330.3 , HORVU4Hr1G012330.2 , HORVU4Hr1G012330.1 , HORVU4Hr1G012330.7 , HORVU4Hr1G012330.6 , HORVU4Hr1G012330.5 , HORVU4Hr1G012330.4
Wheat TraesCS4D02G072800 , TraesCS4D02G072800 , TraesCS4B02G252100 , TraesCS4B02G026100 , TraesCS4A02G052200 , TraesCS4A02G288700 , TraesCS4A02G240900 , TraesCS4A02G240900 , TraesCS3D02G479300 , TraesCS3D02G479300 , TraesCS4B02G074100 , TraesCS4B02G074100 , TraesCS4D02G023500 , TraesCS4D02G252100 , TraesCS4B02G252100 , TraesCS3B02G531300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G115050 - -
2 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.004G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed -
4 Sobic.002G329500 Beta amylase BAM (Zm)(PubMedID : 27208977)@beta-amylase, putative, expressed K01177: beta-amylase
5 Sobic.002G351000 fasciclin domain containing protein, expressed -
6 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
7 Sobic.002G020000 wax synthase, putative, expressed -
8 Sobic.001G394250 - -
9 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.002G020100 chalcone synthase, putative, expressed -
11 Sobic.003G074600 Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
12 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
13 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
14 Sobic.001G323801 - -
15 Sobic.001G435600 - -
16 Sobic.004G105800 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.001G519400 NAD dependent epimerase/dehydratase family protein, putative, expressed -
18 Sobic.003G058600 cytochrome P450, putative, expressed -
19 Sobic.005G056201 - -
20 Sobic.002G415400 - -


Gene co-expression network
sample Sobic005G110436 Sobic005G110436 Sobic009G115050 Sobic009G115050 Sobic005G110436--Sobic009G115050 Sobic001G003600 Sobic001G003600 Sobic005G110436--Sobic001G003600 Sobic004G076000 Sobic004G076000 Sobic005G110436--Sobic004G076000 Sobic002G329500 Sobic002G329500 Sobic005G110436--Sobic002G329500 Sobic002G351000 Sobic002G351000 Sobic005G110436--Sobic002G351000 Sobic001G127700 Sobic001G127700 Sobic005G110436--Sobic001G127700 Sobic002G020000 Sobic002G020000 Sobic005G110436--Sobic002G020000 Sobic001G394250 Sobic001G394250 Sobic005G110436--Sobic001G394250 Sobic006G172700 Sobic006G172700 Sobic005G110436--Sobic006G172700 Sobic009G115050--Sobic002G329500 Sobic009G115050--Sobic001G003600 Sobic002G415400 Sobic002G415400 Sobic009G115050--Sobic002G415400 Sobic001G435600 Sobic001G435600 Sobic009G115050--Sobic001G435600 Sobic002G415300 Sobic002G415300 Sobic009G115050--Sobic002G415300 Sobic009G115050--Sobic004G076000 Sobic009G115050--Sobic005G110436 Sobic009G115050--Sobic001G127700 Sobic002G020100 Sobic002G020100 Sobic009G115050--Sobic002G020100 Sobic001G003600--Sobic006G172700 Sobic001G003600--Sobic002G020100 Sobic001G003600--Sobic009G115050 Sobic003G096100 Sobic003G096100 Sobic001G003600--Sobic003G096100 Sobic001G003600--Sobic004G076000 Sobic001G003600--Sobic001G435600 Sobic001G003600--Sobic002G329500 Sobic003G058600 Sobic003G058600 Sobic001G003600--Sobic003G058600 Sobic001G003600--Sobic005G110436 Sobic001G323801 Sobic001G323801 Sobic004G076000--Sobic001G323801 Sobic004G076000--Sobic009G115050 Sobic004G076000--Sobic001G003600 Sobic008G123600 Sobic008G123600 Sobic004G076000--Sobic008G123600 Sobic001G017000 Sobic001G017000 Sobic004G076000--Sobic001G017000 Sobic004G076000--Sobic002G020100 Sobic004G076000--Sobic005G110436 Sobic004G076000--Sobic006G172700 Sobic003G295800 Sobic003G295800 Sobic004G076000--Sobic003G295800 Sobic002G329500--Sobic009G115050 Sobic002G329500--Sobic002G415400 Sobic002G329500--Sobic001G435600 Sobic002G329500--Sobic002G415300 Sobic002G329500--Sobic001G003600 Sobic004G060700 Sobic004G060700 Sobic002G329500--Sobic004G060700 Sobic002G329500--Sobic001G127700 Sobic002G329500--Sobic003G058600 Sobic002G329500--Sobic004G076000 Sobic002G351000--Sobic005G110436 Sobic002G141100 Sobic002G141100 Sobic002G351000--Sobic002G141100 Sobic009G119400 Sobic009G119400 Sobic002G351000--Sobic009G119400 Sobic002G351000--Sobic004G076000 Sobic003G300500 Sobic003G300500 Sobic002G351000--Sobic003G300500 Sobic002G351000--Sobic001G003600 Sobic002G351000--Sobic001G017000 Sobic002G351000--Sobic008G123600 Sobic002G351000--Sobic009G115050 Sobic001G127700--Sobic006G172700 Sobic001G127700--Sobic009G115050 Sobic005G212400 Sobic005G212400 Sobic001G127700--Sobic005G212400 Sobic001G127700--Sobic004G060700 Sobic001G127700--Sobic001G003600 Sobic001G127700--Sobic001G435600 Sobic007G170800 Sobic007G170800 Sobic001G127700--Sobic007G170800 Sobic001G127700--Sobic002G329500 Sobic001G127700--Sobic002G415400 Sobic002G020000--Sobic005G110436 Sobic002G020000--Sobic009G115050 Sobic002G020000--Sobic001G003600 Sobic002G020000--Sobic003G096100 Sobic002G020000--Sobic004G076000 Sobic002G020000--Sobic002G329500 Sobic002G020000--Sobic002G020100 Sobic002G020000--Sobic001G394250 Sobic002G020000--Sobic006G172700 Sobic004G105800 Sobic004G105800 Sobic001G394250--Sobic004G105800 Sobic001G519400 Sobic001G519400 Sobic001G394250--Sobic001G519400 Sobic001G394250--Sobic005G110436 Sobic001G394250--Sobic003G096100 Sobic001G394250--Sobic001G003600 Sobic001G394250--Sobic002G020000 Sobic001G394250--Sobic001G127700 Sobic001G394250--Sobic006G172700 Sobic003G074600 Sobic003G074600 Sobic001G394250--Sobic003G074600 Sobic006G172700--Sobic001G003600 Sobic009G059100 Sobic009G059100 Sobic006G172700--Sobic009G059100 Sobic006G172700--Sobic002G020100 Sobic006G172700--Sobic001G127700 Sobic005G056201 Sobic005G056201 Sobic006G172700--Sobic005G056201 Sobic006G172700--Sobic004G076000 Sobic006G172700--Sobic009G115050 Sobic006G172700--Sobic004G060700 Sobic006G172700--Sobic003G096100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.