Gene annotation
Transcriptome id Sobic.005G056201.1
Synonym -
Functional annotation -
UniProt A0A1Z5RH90
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.002G020100 chalcone synthase, putative, expressed -
3 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.009G059100 Cupin domain containing protein, expressed -
5 Sobic.004G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed -
6 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
7 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
8 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.006G025700 - -
10 Sobic.009G098100 T-complex protein, putative, expressed -
11 Sobic.005G110436 - -
12 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
13 Sobic.005G200600 dirigent, putative, expressed -
14 Sobic.001G069500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
15 Sobic.009G115050 - -
16 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
17 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
18 Sobic.003G074600 Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
19 Sobic.001G435600 - -
20 Sobic.003G058600 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic005G056201 Sobic005G056201 Sobic006G172700 Sobic006G172700 Sobic005G056201--Sobic006G172700 Sobic002G020100 Sobic002G020100 Sobic005G056201--Sobic002G020100 Sobic001G003600 Sobic001G003600 Sobic005G056201--Sobic001G003600 Sobic009G059100 Sobic009G059100 Sobic005G056201--Sobic009G059100 Sobic004G076000 Sobic004G076000 Sobic005G056201--Sobic004G076000 Sobic003G157500 Sobic003G157500 Sobic005G056201--Sobic003G157500 Sobic003G096100 Sobic003G096100 Sobic005G056201--Sobic003G096100 Sobic005G020200 Sobic005G020200 Sobic005G056201--Sobic005G020200 Sobic006G025700 Sobic006G025700 Sobic005G056201--Sobic006G025700 Sobic006G172700--Sobic001G003600 Sobic006G172700--Sobic009G059100 Sobic006G172700--Sobic002G020100 Sobic001G127700 Sobic001G127700 Sobic006G172700--Sobic001G127700 Sobic006G172700--Sobic005G056201 Sobic006G172700--Sobic004G076000 Sobic009G115050 Sobic009G115050 Sobic006G172700--Sobic009G115050 Sobic004G060700 Sobic004G060700 Sobic006G172700--Sobic004G060700 Sobic006G172700--Sobic003G096100 Sobic002G020100--Sobic001G003600 Sobic002G020100--Sobic006G172700 Sobic002G020100--Sobic005G056201 Sobic002G020100--Sobic004G076000 Sobic002G020100--Sobic009G115050 Sobic002G020100--Sobic009G059100 Sobic002G329500 Sobic002G329500 Sobic002G020100--Sobic002G329500 Sobic009G098100 Sobic009G098100 Sobic002G020100--Sobic009G098100 Sobic001G435600 Sobic001G435600 Sobic002G020100--Sobic001G435600 Sobic001G003600--Sobic006G172700 Sobic001G003600--Sobic002G020100 Sobic001G003600--Sobic009G115050 Sobic001G003600--Sobic003G096100 Sobic001G003600--Sobic004G076000 Sobic001G003600--Sobic001G435600 Sobic001G003600--Sobic002G329500 Sobic003G058600 Sobic003G058600 Sobic001G003600--Sobic003G058600 Sobic005G110436 Sobic005G110436 Sobic001G003600--Sobic005G110436 Sobic009G059100--Sobic006G172700 Sobic009G059100--Sobic003G157500 Sobic009G059100--Sobic006G025700 Sobic009G059100--Sobic001G003600 Sobic009G059100--Sobic002G020100 Sobic005G200600 Sobic005G200600 Sobic009G059100--Sobic005G200600 Sobic009G059100--Sobic005G056201 Sobic009G059100--Sobic003G096100 Sobic009G059100--Sobic001G435600 Sobic001G323801 Sobic001G323801 Sobic004G076000--Sobic001G323801 Sobic004G076000--Sobic009G115050 Sobic004G076000--Sobic001G003600 Sobic008G123600 Sobic008G123600 Sobic004G076000--Sobic008G123600 Sobic001G017000 Sobic001G017000 Sobic004G076000--Sobic001G017000 Sobic004G076000--Sobic002G020100 Sobic004G076000--Sobic005G110436 Sobic004G076000--Sobic006G172700 Sobic003G295800 Sobic003G295800 Sobic004G076000--Sobic003G295800 Sobic003G157500--Sobic006G025700 Sobic003G157500--Sobic009G059100 Sobic003G157500--Sobic005G020200 Sobic004G253800 Sobic004G253800 Sobic003G157500--Sobic004G253800 Sobic003G157500--Sobic002G020100 Sobic003G157500--Sobic005G056201 Sobic003G157500--Sobic001G003600 Sobic003G157500--Sobic005G200600 Sobic004G109000 Sobic004G109000 Sobic003G157500--Sobic004G109000 Sobic003G096100--Sobic001G003600 Sobic003G096100--Sobic006G172700 Sobic001G366500 Sobic001G366500 Sobic003G096100--Sobic001G366500 Sobic003G096100--Sobic009G059100 Sobic003G096100--Sobic001G435600 Sobic003G096100--Sobic003G058600 Sobic003G074600 Sobic003G074600 Sobic003G096100--Sobic003G074600 Sobic003G096100--Sobic002G020100 Sobic003G096100--Sobic005G110436 Sobic005G020200--Sobic003G157500 Sobic005G020200--Sobic009G059100 Sobic005G020200--Sobic005G200600 Sobic005G020200--Sobic004G253800 Sobic006G001400 Sobic006G001400 Sobic005G020200--Sobic006G001400 Sobic005G020200--Sobic005G056201 Sobic005G141000 Sobic005G141000 Sobic005G020200--Sobic005G141000 Sobic005G020200--Sobic006G025700 Sobic008G130700 Sobic008G130700 Sobic005G020200--Sobic008G130700 Sobic006G025700--Sobic003G157500 Sobic006G025700--Sobic009G059100 Sobic006G025700--Sobic002G020100 Sobic006G025700--Sobic004G253800 Sobic006G025700--Sobic001G003600 Sobic002G190100 Sobic002G190100 Sobic006G025700--Sobic002G190100 Sobic006G025700--Sobic001G435600 Sobic006G025700--Sobic004G109000 Sobic006G025700--Sobic003G096100
Octagon: transcription factors


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