Gene annotation
Transcriptome id Sobic.003G058600.1
Synonym Sb03g005020
Functional annotation cytochrome P450, putative, expressed
UniProt A0A1B6Q1N5
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF80
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G64940 : cytochrome P450, family 87, subfamily A, polypeptide 6
RAP-DB (Rice) LOC_Os02g01890.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a039211
Brachypodium PNT66803
Barley HORVU7Hr1G072140.5 , HORVU7Hr1G072140.7 , HORVU7Hr1G072140.6
Wheat TraesCS2D02G120000 , TraesCS7D02G277400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
2 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.001G435600 - -
4 Sobic.009G115050 - -
5 Sobic.007G009600 expressed protein -
6 Sobic.002G329500 Beta amylase BAM (Zm)(PubMedID : 27208977)@beta-amylase, putative, expressed K01177: beta-amylase
7 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G415400 - -
9 Sobic.002G415300 - -
10 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
11 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
12 Sobic.002G416950 - -
13 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
14 Sobic.002G020100 chalcone synthase, putative, expressed -
15 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
16 Sobic.003G074600 Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
17 Sobic.004G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed -
18 Sobic.001G366500 cytochrome P450, putative, expressed -
19 Sobic.009G059100 Cupin domain containing protein, expressed -
20 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic003G058600 Sobic003G058600 Sobic004G060700 Sobic004G060700 Sobic003G058600--Sobic004G060700 Sobic001G003600 Sobic001G003600 Sobic003G058600--Sobic001G003600 Sobic001G435600 Sobic001G435600 Sobic003G058600--Sobic001G435600 Sobic009G115050 Sobic009G115050 Sobic003G058600--Sobic009G115050 Sobic007G009600 Sobic007G009600 Sobic003G058600--Sobic007G009600 Sobic002G329500 Sobic002G329500 Sobic003G058600--Sobic002G329500 Sobic006G172700 Sobic006G172700 Sobic003G058600--Sobic006G172700 Sobic002G415400 Sobic002G415400 Sobic003G058600--Sobic002G415400 Sobic002G415300 Sobic002G415300 Sobic003G058600--Sobic002G415300 Sobic002G416950 Sobic002G416950 Sobic004G060700--Sobic002G416950 Sobic004G060700--Sobic002G415300 Sobic007G170800 Sobic007G170800 Sobic004G060700--Sobic007G170800 Sobic004G060700--Sobic007G009600 Sobic008G163200 Sobic008G163200 Sobic004G060700--Sobic008G163200 Sobic004G060700--Sobic002G415400 Sobic004G060700--Sobic001G435600 Sobic006G238100 Sobic006G238100 Sobic004G060700--Sobic006G238100 Sobic001G379300 Sobic001G379300 Sobic004G060700--Sobic001G379300 Sobic001G003600--Sobic006G172700 Sobic002G020100 Sobic002G020100 Sobic001G003600--Sobic002G020100 Sobic001G003600--Sobic009G115050 Sobic003G096100 Sobic003G096100 Sobic001G003600--Sobic003G096100 Sobic004G076000 Sobic004G076000 Sobic001G003600--Sobic004G076000 Sobic001G003600--Sobic001G435600 Sobic001G003600--Sobic002G329500 Sobic001G003600--Sobic003G058600 Sobic005G110436 Sobic005G110436 Sobic001G003600--Sobic005G110436 Sobic001G435600--Sobic002G415300 Sobic001G435600--Sobic002G415400 Sobic001G435600--Sobic004G060700 Sobic001G435600--Sobic002G416950 Sobic001G435600--Sobic009G115050 Sobic001G435600--Sobic002G329500 Sobic001G435600--Sobic008G163200 Sobic001G435600--Sobic001G003600 Sobic001G435600--Sobic007G170800 Sobic009G115050--Sobic002G329500 Sobic009G115050--Sobic001G003600 Sobic009G115050--Sobic002G415400 Sobic009G115050--Sobic001G435600 Sobic009G115050--Sobic002G415300 Sobic009G115050--Sobic004G076000 Sobic009G115050--Sobic005G110436 Sobic001G127700 Sobic001G127700 Sobic009G115050--Sobic001G127700 Sobic009G115050--Sobic002G020100 Sobic007G009600--Sobic004G060700 Sobic007G009600--Sobic002G416950 Sobic007G009600--Sobic007G170800 Sobic007G009600--Sobic001G379300 Sobic007G009600--Sobic006G238100 Sobic007G009600--Sobic008G163200 Sobic007G009600--Sobic002G415300 Sobic007G009600--Sobic001G435600 Sobic007G009600--Sobic002G415400 Sobic002G329500--Sobic009G115050 Sobic002G329500--Sobic002G415400 Sobic002G329500--Sobic001G435600 Sobic002G329500--Sobic002G415300 Sobic002G329500--Sobic001G003600 Sobic002G329500--Sobic004G060700 Sobic002G329500--Sobic001G127700 Sobic002G329500--Sobic003G058600 Sobic002G329500--Sobic004G076000 Sobic006G172700--Sobic001G003600 Sobic009G059100 Sobic009G059100 Sobic006G172700--Sobic009G059100 Sobic006G172700--Sobic002G020100 Sobic006G172700--Sobic001G127700 Sobic005G056201 Sobic005G056201 Sobic006G172700--Sobic005G056201 Sobic006G172700--Sobic004G076000 Sobic006G172700--Sobic009G115050 Sobic006G172700--Sobic004G060700 Sobic006G172700--Sobic003G096100 Sobic002G415400--Sobic002G415300 Sobic002G415400--Sobic001G435600 Sobic002G415400--Sobic004G060700 Sobic003G068300 Sobic003G068300 Sobic002G415400--Sobic003G068300 Sobic002G415400--Sobic008G163200 Sobic002G415400--Sobic009G115050 Sobic002G415400--Sobic002G416950 Sobic002G415400--Sobic002G329500 Sobic002G415400--Sobic006G238100 Sobic002G415300--Sobic002G415400 Sobic002G415300--Sobic004G060700 Sobic002G415300--Sobic008G163200 Sobic002G415300--Sobic001G435600 Sobic002G415300--Sobic003G068300 Sobic002G415300--Sobic002G416950 Sobic002G415300--Sobic009G115050 Sobic002G415300--Sobic002G329500 Sobic002G415300--Sobic007G170800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.