Gene annotation
Transcriptome id Sobic.001G519400.1
Synonym 3BETAHSD/D1, Sb01g048450, AT3BETAHSD/D1
Functional annotation NAD dependent epimerase/dehydratase family protein, putative, expressed
UniProt A0A1B6QQR2
Pfam PF01370
Panther DB PTHR10366:SF242 PTHR10366
NCBI CDD KOG1430; C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT1G47290 : 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1
RAP-DB (Rice) LOC_Os03g29150.1 : NAD dependent epimerase/dehydratase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002788 , Zm00025a052162
Brachypodium -
Barley HORVU7Hr1G118180.6 , HORVU7Hr1G118180.4 , HORVU7Hr1G118180.5 , HORVU7Hr1G118180.2 , HORVU7Hr1G118180.3 , HORVU7Hr1G118180.1
Wheat TraesCS7A02G538700 , TraesCS7A02G538700 , TraesCS7B02G459300 , TraesCS7B02G459300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G394250 - -
2 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.005G110436 - -
4 Sobic.009G115050 - -
5 Sobic.002G329500 Beta amylase BAM (Zm)(PubMedID : 27208977)@beta-amylase, putative, expressed K01177: beta-amylase
6 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
7 Sobic.002G020000 wax synthase, putative, expressed -
8 Sobic.004G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed -
9 Sobic.003G074600 Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
10 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.002G020100 chalcone synthase, putative, expressed -
12 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
13 Sobic.003G058600 cytochrome P450, putative, expressed -
14 Sobic.001G366500 cytochrome P450, putative, expressed -
15 Sobic.004G105800 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.004G263000 expressed protein -
17 Sobic.001G323801 - -
18 Sobic.001G435600 - -
19 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
20 Sobic.002G033000 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic001G519400 Sobic001G519400 Sobic001G394250 Sobic001G394250 Sobic001G519400--Sobic001G394250 Sobic001G003600 Sobic001G003600 Sobic001G519400--Sobic001G003600 Sobic005G110436 Sobic005G110436 Sobic001G519400--Sobic005G110436 Sobic009G115050 Sobic009G115050 Sobic001G519400--Sobic009G115050 Sobic002G329500 Sobic002G329500 Sobic001G519400--Sobic002G329500 Sobic003G096100 Sobic003G096100 Sobic001G519400--Sobic003G096100 Sobic002G020000 Sobic002G020000 Sobic001G519400--Sobic002G020000 Sobic004G076000 Sobic004G076000 Sobic001G519400--Sobic004G076000 Sobic003G074600 Sobic003G074600 Sobic001G519400--Sobic003G074600 Sobic004G105800 Sobic004G105800 Sobic001G394250--Sobic004G105800 Sobic001G394250--Sobic001G519400 Sobic001G394250--Sobic005G110436 Sobic001G394250--Sobic003G096100 Sobic001G394250--Sobic001G003600 Sobic001G394250--Sobic002G020000 Sobic001G127700 Sobic001G127700 Sobic001G394250--Sobic001G127700 Sobic006G172700 Sobic006G172700 Sobic001G394250--Sobic006G172700 Sobic001G394250--Sobic003G074600 Sobic001G003600--Sobic006G172700 Sobic002G020100 Sobic002G020100 Sobic001G003600--Sobic002G020100 Sobic001G003600--Sobic009G115050 Sobic001G003600--Sobic003G096100 Sobic001G003600--Sobic004G076000 Sobic001G435600 Sobic001G435600 Sobic001G003600--Sobic001G435600 Sobic001G003600--Sobic002G329500 Sobic003G058600 Sobic003G058600 Sobic001G003600--Sobic003G058600 Sobic001G003600--Sobic005G110436 Sobic005G110436--Sobic009G115050 Sobic005G110436--Sobic001G003600 Sobic005G110436--Sobic004G076000 Sobic005G110436--Sobic002G329500 Sobic002G351000 Sobic002G351000 Sobic005G110436--Sobic002G351000 Sobic005G110436--Sobic001G127700 Sobic005G110436--Sobic002G020000 Sobic005G110436--Sobic001G394250 Sobic005G110436--Sobic006G172700 Sobic009G115050--Sobic002G329500 Sobic009G115050--Sobic001G003600 Sobic002G415400 Sobic002G415400 Sobic009G115050--Sobic002G415400 Sobic009G115050--Sobic001G435600 Sobic002G415300 Sobic002G415300 Sobic009G115050--Sobic002G415300 Sobic009G115050--Sobic004G076000 Sobic009G115050--Sobic005G110436 Sobic009G115050--Sobic001G127700 Sobic009G115050--Sobic002G020100 Sobic002G329500--Sobic009G115050 Sobic002G329500--Sobic002G415400 Sobic002G329500--Sobic001G435600 Sobic002G329500--Sobic002G415300 Sobic002G329500--Sobic001G003600 Sobic004G060700 Sobic004G060700 Sobic002G329500--Sobic004G060700 Sobic002G329500--Sobic001G127700 Sobic002G329500--Sobic003G058600 Sobic002G329500--Sobic004G076000 Sobic003G096100--Sobic001G003600 Sobic003G096100--Sobic006G172700 Sobic001G366500 Sobic001G366500 Sobic003G096100--Sobic001G366500 Sobic009G059100 Sobic009G059100 Sobic003G096100--Sobic009G059100 Sobic003G096100--Sobic001G435600 Sobic003G096100--Sobic003G058600 Sobic003G096100--Sobic003G074600 Sobic003G096100--Sobic002G020100 Sobic003G096100--Sobic005G110436 Sobic002G020000--Sobic005G110436 Sobic002G020000--Sobic009G115050 Sobic002G020000--Sobic001G003600 Sobic002G020000--Sobic003G096100 Sobic002G020000--Sobic004G076000 Sobic002G020000--Sobic002G329500 Sobic002G020000--Sobic002G020100 Sobic002G020000--Sobic001G394250 Sobic002G020000--Sobic006G172700 Sobic001G323801 Sobic001G323801 Sobic004G076000--Sobic001G323801 Sobic004G076000--Sobic009G115050 Sobic004G076000--Sobic001G003600 Sobic008G123600 Sobic008G123600 Sobic004G076000--Sobic008G123600 Sobic001G017000 Sobic001G017000 Sobic004G076000--Sobic001G017000 Sobic004G076000--Sobic002G020100 Sobic004G076000--Sobic005G110436 Sobic004G076000--Sobic006G172700 Sobic003G295800 Sobic003G295800 Sobic004G076000--Sobic003G295800 Sobic003G074600--Sobic001G003600 Sobic003G074600--Sobic004G076000 Sobic003G074600--Sobic009G115050 Sobic003G074600--Sobic002G329500 Sobic003G074600--Sobic003G096100 Sobic003G074600--Sobic005G110436 Sobic003G074600--Sobic001G435600 Sobic003G074600--Sobic006G172700 Sobic003G074600--Sobic001G127700
Octagon: transcription factors


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