Gene annotation
Transcriptome id Sobic.009G187100.1
Synonym Sb09g024650
Functional annotation expressed protein
UniProt C5Z0F1
Pfam PF09353
Panther DB PTHR36365
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G20680 : Domain of unknown function (DUF1995)
RAP-DB (Rice) LOC_Os05g42100.1 : expressed protein
MaizeGDB (Corn) Zm00025a044130
Brachypodium KQK05554
Barley HORVU1Hr1G066510.5 , HORVU1Hr1G066510.4 , HORVU1Hr1G066510.7 , HORVU1Hr1G066510.6 , HORVU1Hr1G066510.1 , HORVU1Hr1G066510.3 , HORVU1Hr1G066510.2
Wheat -
Populus -


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cDNA sequences
Sobic.009G187100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G171800 RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
2 Sobic.001G240000 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
3 Sobic.001G040000 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
4 Sobic.003G328200 thylakoid lumenal 20 kDa protein, putative, expressed -
5 Sobic.010G219500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
6 Sobic.003G386300 expressed protein -
7 Sobic.002G251400 expressed protein -
8 Sobic.003G295800 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
9 Sobic.004G335800 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9
10 Sobic.002G152800 RNA recognition motif containing protein, putative, expressed -
11 Sobic.006G107600 plastid-specific 30S ribosomal protein 3, chloroplast precursor, putative, expressed K19032: 30S ribosomal protein 3
12 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
13 Sobic.006G280050 - K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
14 Sobic.001G475600 prenyltransferase, putative, expressed K02548: 1,4-dihydroxy-2-naphthoate polyprenyltransferase
15 Sobic.006G248200 - -
16 Sobic.004G044200 enoyl-CoA hydratase/isomerase family protein, putative, expressed K01661: naphthoate synthase
17 Sobic.001G453300 50S ribosomal protein L15, chloroplast precursor, putative, expressed K02876: RP-L15, MRPL15, large subunit ribosomal protein L15
18 Sobic.009G001500 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
19 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G324700 expressed protein -


Gene co-expression network
sample Sobic009G187100 Sobic009G187100 Sobic007G171800 Sobic007G171800 Sobic009G187100--Sobic007G171800 Sobic001G240000 Sobic001G240000 Sobic009G187100--Sobic001G240000 Sobic001G040000 Sobic001G040000 Sobic009G187100--Sobic001G040000 Sobic003G328200 Sobic003G328200 Sobic009G187100--Sobic003G328200 Sobic010G219500 Sobic010G219500 Sobic009G187100--Sobic010G219500 Sobic003G386300 Sobic003G386300 Sobic009G187100--Sobic003G386300 Sobic002G251400 Sobic002G251400 Sobic009G187100--Sobic002G251400 Sobic003G295800 Sobic003G295800 Sobic009G187100--Sobic003G295800 Sobic004G335800 Sobic004G335800 Sobic009G187100--Sobic004G335800 Sobic010G011200 Sobic010G011200 Sobic007G171800--Sobic010G011200 Sobic005G110481 Sobic005G110481 Sobic007G171800--Sobic005G110481 Sobic007G171800--Sobic002G251400 Sobic002G131700 Sobic002G131700 Sobic007G171800--Sobic002G131700 Sobic009G042200 Sobic009G042200 Sobic007G171800--Sobic009G042200 Sobic001G148200 Sobic001G148200 Sobic007G171800--Sobic001G148200 Sobic003G324700 Sobic003G324700 Sobic007G171800--Sobic003G324700 Sobic007G034500 Sobic007G034500 Sobic007G171800--Sobic007G034500 Sobic010G035200 Sobic010G035200 Sobic007G171800--Sobic010G035200 Sobic001G527100 Sobic001G527100 Sobic001G240000--Sobic001G527100 Sobic001G240000--Sobic001G040000 Sobic001G122400 Sobic001G122400 Sobic001G240000--Sobic001G122400 Sobic001G240000--Sobic003G386300 Sobic001G391400 Sobic001G391400 Sobic001G240000--Sobic001G391400 Sobic001G240000--Sobic002G251400 Sobic001G240000--Sobic004G335800 Sobic001G240000--Sobic003G328200 Sobic002G198000 Sobic002G198000 Sobic001G240000--Sobic002G198000 Sobic001G040000--Sobic004G335800 Sobic001G040000--Sobic001G391400 Sobic001G040000--Sobic001G240000 Sobic001G040000--Sobic001G527100 Sobic001G040000--Sobic003G295800 Sobic001G040000--Sobic002G251400 Sobic004G116100 Sobic004G116100 Sobic001G040000--Sobic004G116100 Sobic001G040000--Sobic001G122400 Sobic001G040000--Sobic003G386300 Sobic003G328200--Sobic001G527100 Sobic003G328200--Sobic001G040000 Sobic004G317900 Sobic004G317900 Sobic003G328200--Sobic004G317900 Sobic003G246400 Sobic003G246400 Sobic003G328200--Sobic003G246400 Sobic003G328200--Sobic001G240000 Sobic003G328200--Sobic003G295800 Sobic003G328200--Sobic004G116100 Sobic004G311100 Sobic004G311100 Sobic003G328200--Sobic004G311100 Sobic003G328200--Sobic003G386300 Sobic010G219500--Sobic003G295800 Sobic002G306201 Sobic002G306201 Sobic010G219500--Sobic002G306201 Sobic009G098100 Sobic009G098100 Sobic010G219500--Sobic009G098100 Sobic004G253800 Sobic004G253800 Sobic010G219500--Sobic004G253800 Sobic010G219500--Sobic007G171800 Sobic009G001500 Sobic009G001500 Sobic010G219500--Sobic009G001500 Sobic004G191200 Sobic004G191200 Sobic010G219500--Sobic004G191200 Sobic008G030000 Sobic008G030000 Sobic010G219500--Sobic008G030000 Sobic010G219500--Sobic007G034500 Sobic003G386300--Sobic001G122400 Sobic003G386300--Sobic004G335800 Sobic003G386300--Sobic001G527100 Sobic003G386300--Sobic002G198000 Sobic003G386300--Sobic001G240000 Sobic010G095200 Sobic010G095200 Sobic003G386300--Sobic010G095200 Sobic003G386300--Sobic001G040000 Sobic004G164100 Sobic004G164100 Sobic003G386300--Sobic004G164100 Sobic001G475600 Sobic001G475600 Sobic003G386300--Sobic001G475600 Sobic002G251400--Sobic001G040000 Sobic002G251400--Sobic004G164100 Sobic002G251400--Sobic001G240000 Sobic002G251400--Sobic003G386300 Sobic002G251400--Sobic001G122400 Sobic002G251400--Sobic004G335800 Sobic002G251400--Sobic001G527100 Sobic007G013400 Sobic007G013400 Sobic002G251400--Sobic007G013400 Sobic002G251400--Sobic003G295800 Sobic003G295800--Sobic007G013400 Sobic003G295800--Sobic009G001500 Sobic003G295800--Sobic001G040000 Sobic003G295800--Sobic004G317900 Sobic003G295800--Sobic009G098100 Sobic001G017000 Sobic001G017000 Sobic003G295800--Sobic001G017000 Sobic001G027600 Sobic001G027600 Sobic003G295800--Sobic001G027600 Sobic001G453300 Sobic001G453300 Sobic003G295800--Sobic001G453300 Sobic003G383500 Sobic003G383500 Sobic003G295800--Sobic003G383500 Sobic004G335800--Sobic001G040000 Sobic004G335800--Sobic001G122400 Sobic004G335800--Sobic003G386300 Sobic004G335800--Sobic001G527100 Sobic004G335800--Sobic004G116100 Sobic004G335800--Sobic003G324700 Sobic007G143700 Sobic007G143700 Sobic004G335800--Sobic007G143700 Sobic004G335800--Sobic001G391400 Sobic004G335800--Sobic001G240000
Octagon: transcription factors


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