Gene annotation
Transcriptome id Sobic.001G172300.2,Sobic.001G172300.3,Sobic.001G172300.1
Synonym FLN2, Sb01g015030
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
kinase, pfkB family, putative, expressed
UniProt C5WT84
Pfam PF00294
Panther DB PTHR10584 PTHR10584:SF155 PTHR10584:SF155 PTHR10584
NCBI CDD KOG2855; Ribokinase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G69200 : fructokinase-like 2
RAP-DB (Rice) LOC_Os03g40550.1 : kinase, pfkB family, putative, expressed
MaizeGDB (Corn) Zm00025a007213
Brachypodium KQK14261 , KQK14262
Barley HORVU2Hr1G002260.2 , HORVU2Hr1G002260.3 , HORVU2Hr1G002260.1 , HORVU2Hr1G002180.2 , HORVU4Hr1G032860.1 , HORVU4Hr1G032860.2 , HORVU2Hr1G002180.1
Wheat TraesCS2B02G004000 , TraesCS2D02G014800 , TraesCS2A02G013600 , TraesCS2A02G111500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G012900 superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
2 Sobic.001G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Homologous to Arabidopsis heme oxygenase 1 (AtHO1)(PubMedID : 11402195)@heme oxygenase 2, putative, expressed -
3 Sobic.003G392000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PDE312/PTAC10, putative, expressed -
4 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
5 Sobic.002G190800 expressed protein -
6 Sobic.006G114300 pentatricopeptide, putative, expressed -
7 Sobic.002G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
8 Sobic.001G357200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
9 Sobic.004G253800 - -
10 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
11 Sobic.001G383900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G383500 rhodanese-like, putative, expressed -
13 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
14 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
15 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
16 Sobic.009G098100 T-complex protein, putative, expressed -
17 Sobic.007G211100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed K03216: trmL, tRNA (cytidine/uridine-2'-O-)-methyltransferase
18 Sobic.001G069500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
19 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
20 Sobic.002G078000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KHG/KDPG aldolase, putative, expressed -


Gene co-expression network
sample Sobic001G172300 Sobic001G172300 Sobic010G012900 Sobic010G012900 Sobic001G172300--Sobic010G012900 Sobic001G347800 Sobic001G347800 Sobic001G172300--Sobic001G347800 Sobic003G392000 Sobic003G392000 Sobic001G172300--Sobic003G392000 Sobic001G188600 Sobic001G188600 Sobic001G172300--Sobic001G188600 Sobic002G190800 Sobic002G190800 Sobic001G172300--Sobic002G190800 Sobic006G114300 Sobic006G114300 Sobic001G172300--Sobic006G114300 Sobic002G360200 Sobic002G360200 Sobic001G172300--Sobic002G360200 Sobic001G357200 Sobic001G357200 Sobic001G172300--Sobic001G357200 Sobic004G253800 Sobic004G253800 Sobic001G172300--Sobic004G253800 Sobic010G012900--Sobic001G188600 Sobic010G012900--Sobic001G357200 Sobic010G011200 Sobic010G011200 Sobic010G012900--Sobic010G011200 Sobic001G383900 Sobic001G383900 Sobic010G012900--Sobic001G383900 Sobic010G012900--Sobic001G172300 Sobic007G034500 Sobic007G034500 Sobic010G012900--Sobic007G034500 Sobic003G383500 Sobic003G383500 Sobic010G012900--Sobic003G383500 Sobic010G012900--Sobic006G114300 Sobic009G098100 Sobic009G098100 Sobic010G012900--Sobic009G098100 Sobic001G347800--Sobic001G172300 Sobic001G347800--Sobic010G012900 Sobic001G347800--Sobic002G190800 Sobic001G347800--Sobic001G357200 Sobic001G347800--Sobic003G392000 Sobic001G347800--Sobic002G360200 Sobic002G078000 Sobic002G078000 Sobic001G347800--Sobic002G078000 Sobic001G347800--Sobic006G114300 Sobic001G347800--Sobic007G034500 Sobic003G392000--Sobic001G172300 Sobic003G392000--Sobic002G190800 Sobic001G228300 Sobic001G228300 Sobic003G392000--Sobic001G228300 Sobic003G392000--Sobic001G383900 Sobic003G392000--Sobic010G012900 Sobic001G120000 Sobic001G120000 Sobic003G392000--Sobic001G120000 Sobic003G392000--Sobic001G188600 Sobic003G392000--Sobic007G034500 Sobic003G392000--Sobic004G253800 Sobic001G069500 Sobic001G069500 Sobic001G188600--Sobic001G069500 Sobic001G188600--Sobic006G114300 Sobic001G188600--Sobic001G357200 Sobic001G188600--Sobic009G098100 Sobic001G188600--Sobic010G012900 Sobic004G109000 Sobic004G109000 Sobic001G188600--Sobic004G109000 Sobic007G211100 Sobic007G211100 Sobic001G188600--Sobic007G211100 Sobic001G188600--Sobic004G253800 Sobic008G030000 Sobic008G030000 Sobic001G188600--Sobic008G030000 Sobic004G044000 Sobic004G044000 Sobic002G190800--Sobic004G044000 Sobic002G190800--Sobic010G012900 Sobic002G190800--Sobic001G172300 Sobic002G190800--Sobic007G034500 Sobic002G190800--Sobic001G383900 Sobic002G190800--Sobic003G392000 Sobic002G190800--Sobic001G120000 Sobic002G190800--Sobic001G357200 Sobic002G190800--Sobic001G188600 Sobic006G114300--Sobic001G188600 Sobic006G114300--Sobic001G357200 Sobic006G114300--Sobic004G109000 Sobic006G114300--Sobic001G069500 Sobic006G114300--Sobic010G012900 Sobic006G114300--Sobic003G383500 Sobic006G114300--Sobic004G253800 Sobic006G114300--Sobic007G211100 Sobic007G013400 Sobic007G013400 Sobic006G114300--Sobic007G013400 Sobic002G360200--Sobic001G172300 Sobic002G360200--Sobic010G012900 Sobic001G013900 Sobic001G013900 Sobic002G360200--Sobic001G013900 Sobic002G360200--Sobic004G253800 Sobic002G360200--Sobic001G188600 Sobic002G360200--Sobic010G011200 Sobic002G360200--Sobic006G114300 Sobic002G360200--Sobic002G078000 Sobic002G360200--Sobic001G357200 Sobic001G357200--Sobic001G188600 Sobic001G357200--Sobic006G114300 Sobic001G357200--Sobic010G012900 Sobic009G001500 Sobic009G001500 Sobic001G357200--Sobic009G001500 Sobic001G357200--Sobic008G030000 Sobic001G357200--Sobic007G034500 Sobic008G123600 Sobic008G123600 Sobic001G357200--Sobic008G123600 Sobic001G357200--Sobic001G069500 Sobic001G357200--Sobic003G383500 Sobic005G200600 Sobic005G200600 Sobic004G253800--Sobic005G200600 Sobic003G157500 Sobic003G157500 Sobic004G253800--Sobic003G157500 Sobic005G020200 Sobic005G020200 Sobic004G253800--Sobic005G020200 Sobic004G253800--Sobic001G188600 Sobic006G025700 Sobic006G025700 Sobic004G253800--Sobic006G025700 Sobic009G059100 Sobic009G059100 Sobic004G253800--Sobic009G059100 Sobic004G253800--Sobic009G001500 Sobic004G253800--Sobic001G357200 Sobic004G253800--Sobic006G114300
Octagon: transcription factors


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