Gene annotation
Transcriptome id Sobic.001G347800.1
Synonym HO2,heme oxygenase 2, SbHO2, Sb01g033330
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Homologous to Arabidopsis heme oxygenase 1 (AtHO1) (PubMedID : 11402195)
heme oxygenase 2, putative, expressed
UniProt C5WXM4 , Q94FW8
Pfam PF01126
Panther DB PTHR35703 PTHR35703:SF1
NCBI CDD KOG4480; Heme oxygenase
KEGG Orthology -
Gene Ontology GO:0006788; heme oxidation GO:0004392heme oxygenase (decyclizing) activity


Orthologs (automatic annotation)
TAIR AT2G26550 : heme oxygenase 2
RAP-DB (Rice) LOC_Os03g27770.1 : heme oxygenase 2, putative, expressed
MaizeGDB (Corn) Zm00025a052130
Brachypodium KQK21399
Barley HORVU4Hr1G026210.5 , HORVU4Hr1G026210.4 , HORVU4Hr1G026210.3 , HORVU4Hr1G026210.2 , HORVU4Hr1G026210.1
Wheat TraesCS4D02G126600 , TraesCS4A02G186900 , TraesCS4B02G131800
Populus -


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cDNA sequences
Sobic.001G347800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G172300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinase, pfkB family, putative, expressed -
2 Sobic.010G012900 superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
3 Sobic.002G190800 expressed protein -
4 Sobic.001G357200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
5 Sobic.003G392000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PDE312/PTAC10, putative, expressed -
6 Sobic.002G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
7 Sobic.002G078000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KHG/KDPG aldolase, putative, expressed -
8 Sobic.006G114300 pentatricopeptide, putative, expressed -
9 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
10 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
11 Sobic.010G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Superoxide dismutase (Os)(PubMedID : 27208977)@superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
12 Sobic.005G022000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
13 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
14 Sobic.001G383900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G076500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
16 Sobic.004G253800 - -
17 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
18 Sobic.002G013700 PPR2, putative, expressed -
19 Sobic.003G095000 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
20 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL


Gene co-expression network
sample Sobic001G347800 Sobic001G347800 Sobic001G172300 Sobic001G172300 Sobic001G347800--Sobic001G172300 Sobic010G012900 Sobic010G012900 Sobic001G347800--Sobic010G012900 Sobic002G190800 Sobic002G190800 Sobic001G347800--Sobic002G190800 Sobic001G357200 Sobic001G357200 Sobic001G347800--Sobic001G357200 Sobic003G392000 Sobic003G392000 Sobic001G347800--Sobic003G392000 Sobic002G360200 Sobic002G360200 Sobic001G347800--Sobic002G360200 Sobic002G078000 Sobic002G078000 Sobic001G347800--Sobic002G078000 Sobic006G114300 Sobic006G114300 Sobic001G347800--Sobic006G114300 Sobic007G034500 Sobic007G034500 Sobic001G347800--Sobic007G034500 Sobic001G172300--Sobic010G012900 Sobic001G172300--Sobic001G347800 Sobic001G172300--Sobic003G392000 Sobic001G188600 Sobic001G188600 Sobic001G172300--Sobic001G188600 Sobic001G172300--Sobic002G190800 Sobic001G172300--Sobic006G114300 Sobic001G172300--Sobic002G360200 Sobic001G172300--Sobic001G357200 Sobic004G253800 Sobic004G253800 Sobic001G172300--Sobic004G253800 Sobic010G012900--Sobic001G188600 Sobic010G012900--Sobic001G357200 Sobic010G011200 Sobic010G011200 Sobic010G012900--Sobic010G011200 Sobic001G383900 Sobic001G383900 Sobic010G012900--Sobic001G383900 Sobic010G012900--Sobic001G172300 Sobic010G012900--Sobic007G034500 Sobic003G383500 Sobic003G383500 Sobic010G012900--Sobic003G383500 Sobic010G012900--Sobic006G114300 Sobic009G098100 Sobic009G098100 Sobic010G012900--Sobic009G098100 Sobic004G044000 Sobic004G044000 Sobic002G190800--Sobic004G044000 Sobic002G190800--Sobic010G012900 Sobic002G190800--Sobic001G172300 Sobic002G190800--Sobic007G034500 Sobic002G190800--Sobic001G383900 Sobic002G190800--Sobic003G392000 Sobic001G120000 Sobic001G120000 Sobic002G190800--Sobic001G120000 Sobic002G190800--Sobic001G357200 Sobic002G190800--Sobic001G188600 Sobic001G357200--Sobic001G188600 Sobic001G357200--Sobic006G114300 Sobic001G357200--Sobic010G012900 Sobic009G001500 Sobic009G001500 Sobic001G357200--Sobic009G001500 Sobic008G030000 Sobic008G030000 Sobic001G357200--Sobic008G030000 Sobic001G357200--Sobic007G034500 Sobic008G123600 Sobic008G123600 Sobic001G357200--Sobic008G123600 Sobic001G069500 Sobic001G069500 Sobic001G357200--Sobic001G069500 Sobic001G357200--Sobic003G383500 Sobic003G392000--Sobic001G172300 Sobic003G392000--Sobic002G190800 Sobic001G228300 Sobic001G228300 Sobic003G392000--Sobic001G228300 Sobic003G392000--Sobic001G383900 Sobic003G392000--Sobic010G012900 Sobic003G392000--Sobic001G120000 Sobic003G392000--Sobic001G188600 Sobic003G392000--Sobic007G034500 Sobic003G392000--Sobic004G253800 Sobic002G360200--Sobic001G172300 Sobic002G360200--Sobic010G012900 Sobic001G013900 Sobic001G013900 Sobic002G360200--Sobic001G013900 Sobic002G360200--Sobic004G253800 Sobic002G360200--Sobic001G188600 Sobic002G360200--Sobic010G011200 Sobic002G360200--Sobic006G114300 Sobic002G360200--Sobic002G078000 Sobic002G360200--Sobic001G357200 Sobic002G078000--Sobic001G013900 Sobic003G333700 Sobic003G333700 Sobic002G078000--Sobic003G333700 Sobic001G104300 Sobic001G104300 Sobic002G078000--Sobic001G104300 Sobic005G022000 Sobic005G022000 Sobic002G078000--Sobic005G022000 Sobic003G223000 Sobic003G223000 Sobic002G078000--Sobic003G223000 Sobic002G078000--Sobic002G360200 Sobic002G078000--Sobic001G188600 Sobic002G078000--Sobic010G012900 Sobic004G109000 Sobic004G109000 Sobic002G078000--Sobic004G109000 Sobic006G114300--Sobic001G188600 Sobic006G114300--Sobic001G357200 Sobic006G114300--Sobic004G109000 Sobic006G114300--Sobic001G069500 Sobic006G114300--Sobic010G012900 Sobic006G114300--Sobic003G383500 Sobic006G114300--Sobic004G253800 Sobic007G211100 Sobic007G211100 Sobic006G114300--Sobic007G211100 Sobic007G013400 Sobic007G013400 Sobic006G114300--Sobic007G013400 Sobic007G171800 Sobic007G171800 Sobic007G034500--Sobic007G171800 Sobic007G034500--Sobic004G044000 Sobic006G280050 Sobic006G280050 Sobic007G034500--Sobic006G280050 Sobic004G191200 Sobic004G191200 Sobic007G034500--Sobic004G191200 Sobic007G034500--Sobic001G357200 Sobic007G034500--Sobic009G001500 Sobic007G034500--Sobic001G383900 Sobic001G191000 Sobic001G191000 Sobic007G034500--Sobic001G191000 Sobic001G027600 Sobic001G027600 Sobic007G034500--Sobic001G027600
Octagon: transcription factors


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