Gene annotation
Transcriptome id Sobic.002G124100.1
Synonym
Functional annotation -
UniProt A0A1B6QAT0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G124100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G236300 tat pathway signal sequence family protein, expressed -
2 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
3 Sobic.007G116100 thioredoxin, putative, expressed -
4 Sobic.001G395300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsClp4 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
5 Sobic.001G228300 SAP domain containing protein, expressed -
6 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
7 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
8 Sobic.002G045700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polynucleotide phosphorylase, putative, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
9 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
10 Sobic.008G130700 expressed protein -
11 Sobic.005G141000 plant protein of unknown function domain containing protein, expressed -
12 Sobic.005G022800 GTP binding protein, putative, expressed -
13 Sobic.001G321400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB2, putative, expressed -
14 Sobic.004G253800 - -
15 Sobic.006G281066 - -
16 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
17 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.010G012900 superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
20 Sobic.007G090415 - -


Gene co-expression network
sample Sobic002G124100 Sobic002G124100 Sobic003G236300 Sobic003G236300 Sobic002G124100--Sobic003G236300 Sobic006G263800 Sobic006G263800 Sobic002G124100--Sobic006G263800 Sobic007G116100 Sobic007G116100 Sobic002G124100--Sobic007G116100 Sobic001G395300 Sobic001G395300 Sobic002G124100--Sobic001G395300 Sobic001G228300 Sobic001G228300 Sobic002G124100--Sobic001G228300 Sobic010G011200 Sobic010G011200 Sobic002G124100--Sobic010G011200 Sobic002G140000 Sobic002G140000 Sobic002G124100--Sobic002G140000 Sobic002G045700 Sobic002G045700 Sobic002G124100--Sobic002G045700 Sobic010G027200 Sobic010G027200 Sobic002G124100--Sobic010G027200 Sobic003G236300--Sobic002G124100 Sobic006G281066 Sobic006G281066 Sobic003G236300--Sobic006G281066 Sobic008G130700 Sobic008G130700 Sobic003G236300--Sobic008G130700 Sobic001G543700 Sobic001G543700 Sobic003G236300--Sobic001G543700 Sobic003G236300--Sobic006G263800 Sobic002G190100 Sobic002G190100 Sobic003G236300--Sobic002G190100 Sobic005G141000 Sobic005G141000 Sobic003G236300--Sobic005G141000 Sobic009G001500 Sobic009G001500 Sobic003G236300--Sobic009G001500 Sobic004G109000 Sobic004G109000 Sobic003G236300--Sobic004G109000 Sobic006G263800--Sobic007G116100 Sobic006G263800--Sobic002G190100 Sobic006G263800--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic006G263800--Sobic001G281500 Sobic005G022800 Sobic005G022800 Sobic006G263800--Sobic005G022800 Sobic001G099000 Sobic001G099000 Sobic006G263800--Sobic001G099000 Sobic006G263800--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic006G263800--Sobic006G237100 Sobic001G120000 Sobic001G120000 Sobic006G263800--Sobic001G120000 Sobic007G116100--Sobic010G027200 Sobic007G116100--Sobic001G281500 Sobic007G116100--Sobic002G140000 Sobic007G116100--Sobic006G263800 Sobic007G116100--Sobic001G099000 Sobic007G015300 Sobic007G015300 Sobic007G116100--Sobic007G015300 Sobic007G116100--Sobic006G237100 Sobic004G338300 Sobic004G338300 Sobic007G116100--Sobic004G338300 Sobic007G116100--Sobic005G022800 Sobic009G137000 Sobic009G137000 Sobic001G395300--Sobic009G137000 Sobic002G404900 Sobic002G404900 Sobic001G395300--Sobic002G404900 Sobic001G395300--Sobic001G228300 Sobic001G395300--Sobic006G237100 Sobic001G395300--Sobic006G263800 Sobic001G395300--Sobic002G140000 Sobic006G204100 Sobic006G204100 Sobic001G395300--Sobic006G204100 Sobic001G395300--Sobic007G116100 Sobic001G395300--Sobic010G027200 Sobic001G228300--Sobic001G395300 Sobic001G228300--Sobic002G045700 Sobic001G138000 Sobic001G138000 Sobic001G228300--Sobic001G138000 Sobic001G228300--Sobic006G263800 Sobic003G392000 Sobic003G392000 Sobic001G228300--Sobic003G392000 Sobic001G228300--Sobic007G116100 Sobic001G228300--Sobic002G140000 Sobic003G283100 Sobic003G283100 Sobic001G228300--Sobic003G283100 Sobic006G110200 Sobic006G110200 Sobic001G228300--Sobic006G110200 Sobic005G110481 Sobic005G110481 Sobic010G011200--Sobic005G110481 Sobic007G171800 Sobic007G171800 Sobic010G011200--Sobic007G171800 Sobic010G012900 Sobic010G012900 Sobic010G011200--Sobic010G012900 Sobic001G148200 Sobic001G148200 Sobic010G011200--Sobic001G148200 Sobic002G013700 Sobic002G013700 Sobic010G011200--Sobic002G013700 Sobic010G011200--Sobic009G001500 Sobic001G383900 Sobic001G383900 Sobic010G011200--Sobic001G383900 Sobic009G104700 Sobic009G104700 Sobic010G011200--Sobic009G104700 Sobic009G098100 Sobic009G098100 Sobic010G011200--Sobic009G098100 Sobic002G140000--Sobic010G027200 Sobic002G140000--Sobic007G116100 Sobic002G140000--Sobic007G015300 Sobic002G140000--Sobic005G022800 Sobic002G140000--Sobic006G237100 Sobic002G140000--Sobic006G263800 Sobic002G140000--Sobic001G099000 Sobic001G375000 Sobic001G375000 Sobic002G140000--Sobic001G375000 Sobic001G321400 Sobic001G321400 Sobic002G140000--Sobic001G321400 Sobic002G045700--Sobic002G140000 Sobic002G045700--Sobic004G338300 Sobic002G045700--Sobic001G228300 Sobic009G251000 Sobic009G251000 Sobic002G045700--Sobic009G251000 Sobic002G045700--Sobic007G015300 Sobic002G045700--Sobic010G027200 Sobic002G045700--Sobic006G110200 Sobic002G045700--Sobic007G116100 Sobic002G045700--Sobic010G011200 Sobic010G027200--Sobic002G140000 Sobic010G027200--Sobic001G375000 Sobic010G027200--Sobic001G099000 Sobic010G027200--Sobic007G116100 Sobic010G027200--Sobic006G237100 Sobic010G027200--Sobic007G015300 Sobic005G184300 Sobic005G184300 Sobic010G027200--Sobic005G184300 Sobic010G027200--Sobic004G338300 Sobic010G027200--Sobic009G104700
Octagon: transcription factors


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