Gene annotation
Transcriptome id Sobic.006G204100.1
Synonym Sb06g027510, DAL, DAL1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
DAG protein, chloroplast precursor, putative, expressed
UniProt C5YF67
Pfam -
Panther DB PTHR31346 PTHR31346:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33430 : differentiation and greening-like 1
RAP-DB (Rice) LOC_Os04g51280.1 : DAG protein, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a056947 , Zm00025a057038 , Zm00025a041319
Brachypodium PNT76008 , KQJ84402 , KQK18487 , PNT76616 , PNT76617 , KQK19818 , KQK19819 , PNT76615 , KQK19788 , KQK19789 , KQJ92747 , KQK18495 , KQK18494 , KQK18492
Barley HORVU6Hr1G002030.3 , HORVU6Hr1G002030.1 , HORVU6Hr1G002030.6 , HORVU6Hr1G002030.5 , HORVU6Hr1G002030.4 , HORVU2Hr1G040170.9 , HORVU2Hr1G040170.6 , HORVU2Hr1G101720.1 , HORVU2Hr1G040170.29 , HORVU2Hr1G040170.28 , HORVU2Hr1G040170.23 , HORVU2Hr1G040170.22 , HORVU2Hr1G040170.21 , HORVU2Hr1G040170.20 , HORVU2Hr1G040170.27 , HORVU2Hr1G040170.26 , HORVU2Hr1G040170.25 , HORVU2Hr1G040170.24 , HORVU2Hr1G040170.12 , HORVU2Hr1G040170.10 , HORVU2Hr1G040170.11 , HORVU2Hr1G040170.17 , HORVU2Hr1G040170.14 , HORVU2Hr1G040170.15 , HORVU2Hr1G040170.18 , HORVU2Hr1G040170.19 , HORVU7Hr1G008880.4 , HORVU7Hr1G008880.3 , HORVU7Hr1G008880.2 , HORVU2Hr1G101720.3 , HORVU5Hr1G072150.8 , HORVU5Hr1G072150.9 , HORVU5Hr1G072150.1 , HORVU5Hr1G072150.2 , HORVU5Hr1G072150.3 , HORVU5Hr1G072150.5 , HORVU5Hr1G072150.6 , HORVU5Hr1G072150.7 , HORVU5Hr1G072150.10 , HORVU2Hr1G101720.2
Wheat TraesCS4A02G437100 , TraesCS2D02G434600 , TraesCS6D02G007100 , TraesCS2A02G437600 , TraesCS2B02G457700 , TraesCS6A02G005300 , TraesCS7D02G045100 , TraesCS7A02G050200 , TraesCS6D02G294000 , TraesCS6B02G010000
Populus -


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cDNA sequences
Sobic.006G204100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G074200 - -
2 Sobic.008G072300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.001G388400 expressed protein -
4 Sobic.009G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@16S rRNA processing protein RimM containing protein, expressed -
5 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
6 Sobic.009G233800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf23, putative, expressed -
7 Sobic.010G028000 ribosome-binding factor A, chloroplast precursor, putative, expressed K02834: ribosome-binding factor A
8 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
9 Sobic.004G250200 ORMM1(PubMedID : 24676859)@RNA recognition motif family protein, expressed -
10 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
11 Sobic.003G221700 psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed -
12 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
13 Sobic.010G074100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1270, putative, expressed -
14 Sobic.001G161400 single-stranded DNA-binding protein, putative, expressed -
15 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
17 Sobic.009G253000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed -
18 Sobic.002G004000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
19 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
20 Sobic.002G250100 dehydrogenase, putative, expressed -


Gene co-expression network
sample Sobic006G204100 Sobic006G204100 Sobic010G074200 Sobic010G074200 Sobic006G204100--Sobic010G074200 Sobic008G072300 Sobic008G072300 Sobic006G204100--Sobic008G072300 Sobic001G388400 Sobic001G388400 Sobic006G204100--Sobic001G388400 Sobic009G234200 Sobic009G234200 Sobic006G204100--Sobic009G234200 Sobic003G330100 Sobic003G330100 Sobic006G204100--Sobic003G330100 Sobic009G233800 Sobic009G233800 Sobic006G204100--Sobic009G233800 Sobic010G028000 Sobic010G028000 Sobic006G204100--Sobic010G028000 Sobic007G227600 Sobic007G227600 Sobic006G204100--Sobic007G227600 Sobic004G250200 Sobic004G250200 Sobic006G204100--Sobic004G250200 Sobic010G074200--Sobic006G204100 Sobic010G074100 Sobic010G074100 Sobic010G074200--Sobic010G074100 Sobic010G074200--Sobic001G388400 Sobic010G074200--Sobic009G233800 Sobic009G036300 Sobic009G036300 Sobic010G074200--Sobic009G036300 Sobic010G074200--Sobic010G028000 Sobic010G074200--Sobic007G227600 Sobic010G074200--Sobic009G234200 Sobic010G074200--Sobic003G330100 Sobic008G072300--Sobic006G204100 Sobic008G072300--Sobic003G330100 Sobic003G221700 Sobic003G221700 Sobic008G072300--Sobic003G221700 Sobic008G072300--Sobic009G234200 Sobic006G111600 Sobic006G111600 Sobic008G072300--Sobic006G111600 Sobic002G345200 Sobic002G345200 Sobic008G072300--Sobic002G345200 Sobic007G034500 Sobic007G034500 Sobic008G072300--Sobic007G034500 Sobic008G072300--Sobic010G074200 Sobic008G072300--Sobic004G250200 Sobic001G388400--Sobic009G234200 Sobic001G388400--Sobic010G028000 Sobic001G388400--Sobic009G036300 Sobic001G388400--Sobic010G074200 Sobic001G388400--Sobic007G227600 Sobic001G388400--Sobic006G204100 Sobic009G253000 Sobic009G253000 Sobic001G388400--Sobic009G253000 Sobic001G388400--Sobic009G233800 Sobic002G250100 Sobic002G250100 Sobic001G388400--Sobic002G250100 Sobic009G234200--Sobic001G388400 Sobic009G234200--Sobic010G028000 Sobic010G183400 Sobic010G183400 Sobic009G234200--Sobic010G183400 Sobic009G234200--Sobic003G330100 Sobic009G234200--Sobic004G250200 Sobic009G234200--Sobic006G204100 Sobic003G245800 Sobic003G245800 Sobic009G234200--Sobic003G245800 Sobic009G234200--Sobic006G111600 Sobic004G179200 Sobic004G179200 Sobic009G234200--Sobic004G179200 Sobic003G330100--Sobic006G111600 Sobic002G131700 Sobic002G131700 Sobic003G330100--Sobic002G131700 Sobic003G330100--Sobic004G250200 Sobic003G330100--Sobic009G234200 Sobic003G330100--Sobic003G221700 Sobic003G330100--Sobic008G072300 Sobic003G330100--Sobic006G204100 Sobic003G330100--Sobic010G183400 Sobic003G330100--Sobic002G345200 Sobic009G233800--Sobic010G074200 Sobic009G233800--Sobic006G204100 Sobic009G233800--Sobic001G388400 Sobic004G055600 Sobic004G055600 Sobic009G233800--Sobic004G055600 Sobic003G030400 Sobic003G030400 Sobic009G233800--Sobic003G030400 Sobic009G233800--Sobic010G074100 Sobic009G137000 Sobic009G137000 Sobic009G233800--Sobic009G137000 Sobic001G076200 Sobic001G076200 Sobic009G233800--Sobic001G076200 Sobic009G233800--Sobic010G028000 Sobic010G028000--Sobic001G388400 Sobic010G028000--Sobic009G234200 Sobic010G028000--Sobic006G204100 Sobic010G028000--Sobic010G074200 Sobic010G028000--Sobic009G036300 Sobic010G028000--Sobic007G227600 Sobic010G028000--Sobic003G330100 Sobic010G028000--Sobic003G245800 Sobic010G028000--Sobic010G183400 Sobic007G227600--Sobic010G074100 Sobic007G227600--Sobic009G036300 Sobic007G227600--Sobic001G388400 Sobic007G227600--Sobic009G234200 Sobic007G227600--Sobic010G028000 Sobic007G227600--Sobic010G074200 Sobic007G227600--Sobic009G253000 Sobic010G211500 Sobic010G211500 Sobic007G227600--Sobic010G211500 Sobic002G163700 Sobic002G163700 Sobic007G227600--Sobic002G163700 Sobic004G250200--Sobic003G330100 Sobic004G250200--Sobic010G183400 Sobic004G250200--Sobic003G245800 Sobic004G250200--Sobic009G234200 Sobic004G250200--Sobic006G111600 Sobic004G250200--Sobic002G345200 Sobic005G028900 Sobic005G028900 Sobic004G250200--Sobic005G028900 Sobic004G250200--Sobic003G221700 Sobic003G444500 Sobic003G444500 Sobic004G250200--Sobic003G444500
Octagon: transcription factors


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