Gene annotation
Transcriptome id Sobic.002G250100.3,Sobic.002G250100.2
Synonym Sb02g028600
Functional annotation dehydrogenase, putative, expressed
UniProt A0A1W0W5L4 , C5X4H6
Pfam PF01370
Panther DB PTHR10366 PTHR10366:SF342
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G33590 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os09g31502.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a047474 , Zm00025a047477 , Zm00025a047476 , Zm00025a014225
Brachypodium KQK04042
Barley HORVU5Hr1G073760.1 , HORVU5Hr1G073760.2 , HORVU5Hr1G073770.2 , HORVU5Hr1G073770.1 , HORVU5Hr1G023440.1 , HORVU5Hr1G023440.2 , HORVU5Hr1G073800.5 , HORVU5Hr1G073800.7 , HORVU5Hr1G073800.1 , HORVU5Hr1G073800.2 , HORVU7Hr1G093370.4 , HORVU7Hr1G093370.3 , HORVU7Hr1G093370.2 , HORVU7Hr1G093370.1 , HORVU5Hr1G073900.1 , HORVU5Hr1G073900.2 , HORVU5Hr1G073900.3 , HORVU5Hr1G073900.4
Wheat TraesCS5B02G268400 , TraesCS5B02G268300 , TraesCS5B02G268600 , TraesCS5D02G276300 , TraesCS5A02G268600 , TraesCS5B02G268100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G245800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoglycerate mutase, putative, expressed -
2 Sobic.001G388400 expressed protein -
3 Sobic.002G163700 expressed protein -
4 Sobic.010G028000 ribosome-binding factor A, chloroplast precursor, putative, expressed K02834: ribosome-binding factor A
5 Sobic.009G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@16S rRNA processing protein RimM containing protein, expressed -
6 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
8 Sobic.003G439600 amino acid kinase, putative, expressed K09903: uridylate kinase
9 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
10 Sobic.008G072300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.006G204100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
12 Sobic.010G074200 - -
13 Sobic.010G074100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1270, putative, expressed -
14 Sobic.004G250200 ORMM1(PubMedID : 24676859)@RNA recognition motif family protein, expressed -
15 Sobic.003G221700 psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed -
16 Sobic.010G183400 down-regulated TF in developmental senescence(PubMedID : 27586543)@homeobox domain containing protein, expressed -
17 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
18 Sobic.005G138600 - -
19 Sobic.003G404400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized RNA methyltransferase pc1998, putative, expressed -
20 Sobic.003G286300 GTPase of unknown function domain containing protein, putative, expressed K03978: GTP-binding protein


Gene co-expression network
sample Sobic002G250100 Sobic002G250100 Sobic003G245800 Sobic003G245800 Sobic002G250100--Sobic003G245800 Sobic001G388400 Sobic001G388400 Sobic002G250100--Sobic001G388400 Sobic002G163700 Sobic002G163700 Sobic002G250100--Sobic002G163700 Sobic010G028000 Sobic010G028000 Sobic002G250100--Sobic010G028000 Sobic009G234200 Sobic009G234200 Sobic002G250100--Sobic009G234200 Sobic002G345200 Sobic002G345200 Sobic002G250100--Sobic002G345200 Sobic007G227600 Sobic007G227600 Sobic002G250100--Sobic007G227600 Sobic003G439600 Sobic003G439600 Sobic002G250100--Sobic003G439600 Sobic006G197700 Sobic006G197700 Sobic002G250100--Sobic006G197700 Sobic003G245800--Sobic006G197700 Sobic003G245800--Sobic002G345200 Sobic004G250200 Sobic004G250200 Sobic003G245800--Sobic004G250200 Sobic010G183400 Sobic010G183400 Sobic003G245800--Sobic010G183400 Sobic003G245800--Sobic003G439600 Sobic003G245800--Sobic002G250100 Sobic003G221700 Sobic003G221700 Sobic003G245800--Sobic003G221700 Sobic003G245800--Sobic009G234200 Sobic003G330100 Sobic003G330100 Sobic003G245800--Sobic003G330100 Sobic001G388400--Sobic009G234200 Sobic001G388400--Sobic010G028000 Sobic009G036300 Sobic009G036300 Sobic001G388400--Sobic009G036300 Sobic010G074200 Sobic010G074200 Sobic001G388400--Sobic010G074200 Sobic001G388400--Sobic007G227600 Sobic006G204100 Sobic006G204100 Sobic001G388400--Sobic006G204100 Sobic009G253000 Sobic009G253000 Sobic001G388400--Sobic009G253000 Sobic009G233800 Sobic009G233800 Sobic001G388400--Sobic009G233800 Sobic001G388400--Sobic002G250100 Sobic002G163700--Sobic003G439600 Sobic001G450600 Sobic001G450600 Sobic002G163700--Sobic001G450600 Sobic002G163700--Sobic007G227600 Sobic006G214700 Sobic006G214700 Sobic002G163700--Sobic006G214700 Sobic002G163700--Sobic002G250100 Sobic002G163700--Sobic006G197700 Sobic002G386400 Sobic002G386400 Sobic002G163700--Sobic002G386400 Sobic002G038300 Sobic002G038300 Sobic002G163700--Sobic002G038300 Sobic002G163700--Sobic003G245800 Sobic010G028000--Sobic001G388400 Sobic010G028000--Sobic009G234200 Sobic010G028000--Sobic006G204100 Sobic010G028000--Sobic010G074200 Sobic010G028000--Sobic009G036300 Sobic010G028000--Sobic007G227600 Sobic010G028000--Sobic003G330100 Sobic010G028000--Sobic003G245800 Sobic010G028000--Sobic010G183400 Sobic009G234200--Sobic001G388400 Sobic009G234200--Sobic010G028000 Sobic009G234200--Sobic010G183400 Sobic009G234200--Sobic003G330100 Sobic009G234200--Sobic004G250200 Sobic009G234200--Sobic006G204100 Sobic009G234200--Sobic003G245800 Sobic006G111600 Sobic006G111600 Sobic009G234200--Sobic006G111600 Sobic004G179200 Sobic004G179200 Sobic009G234200--Sobic004G179200 Sobic002G345200--Sobic003G245800 Sobic002G345200--Sobic006G197700 Sobic002G345200--Sobic003G330100 Sobic002G345200--Sobic004G250200 Sobic002G345200--Sobic003G221700 Sobic008G072300 Sobic008G072300 Sobic002G345200--Sobic008G072300 Sobic002G345200--Sobic006G111600 Sobic002G345200--Sobic002G250100 Sobic002G345200--Sobic010G028000 Sobic010G074100 Sobic010G074100 Sobic007G227600--Sobic010G074100 Sobic007G227600--Sobic009G036300 Sobic007G227600--Sobic001G388400 Sobic007G227600--Sobic009G234200 Sobic007G227600--Sobic010G028000 Sobic007G227600--Sobic010G074200 Sobic007G227600--Sobic009G253000 Sobic010G211500 Sobic010G211500 Sobic007G227600--Sobic010G211500 Sobic007G227600--Sobic002G163700 Sobic003G439600--Sobic003G245800 Sobic003G439600--Sobic010G183400 Sobic002G331800 Sobic002G331800 Sobic003G439600--Sobic002G331800 Sobic003G439600--Sobic006G214700 Sobic005G028900 Sobic005G028900 Sobic003G439600--Sobic005G028900 Sobic003G439600--Sobic002G163700 Sobic003G439600--Sobic006G197700 Sobic003G439600--Sobic001G450600 Sobic003G286300 Sobic003G286300 Sobic003G439600--Sobic003G286300 Sobic006G197700--Sobic003G245800 Sobic006G197700--Sobic002G345200 Sobic006G197700--Sobic006G111600 Sobic007G132500 Sobic007G132500 Sobic006G197700--Sobic007G132500 Sobic006G197700--Sobic003G439600 Sobic006G197700--Sobic003G330100 Sobic006G197700--Sobic003G221700 Sobic006G197700--Sobic002G386400 Sobic006G197700--Sobic002G163700
Octagon: transcription factors


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