Gene annotation
Transcriptome id Sobic.001G388400.1,Sobic.001G388400.2
Synonym Sb01g036820
Functional annotation expressed protein
UniProt A0A1B6QNI2 , C5X1S4
Pfam -
Panther DB PTHR34118 PTHR34118:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22340 : -
RAP-DB (Rice) LOC_Os03g20640.1 : expressed protein
MaizeGDB (Corn) Zm00025a002252 , Zm00025a052505 , Zm00025a043347
Brachypodium KQK21903 , KQK21902 , PNT77500 , KQK21904
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@16S rRNA processing protein RimM containing protein, expressed -
2 Sobic.010G028000 ribosome-binding factor A, chloroplast precursor, putative, expressed K02834: ribosome-binding factor A
3 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
4 Sobic.010G074200 - -
5 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
6 Sobic.006G204100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
7 Sobic.009G253000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed -
8 Sobic.009G233800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf23, putative, expressed -
9 Sobic.002G250100 dehydrogenase, putative, expressed -
10 Sobic.010G074100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1270, putative, expressed -
11 Sobic.003G245800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoglycerate mutase, putative, expressed -
12 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
13 Sobic.002G038300 RNA recognition motif containing protein, putative, expressed -
14 Sobic.007G205600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
15 Sobic.002G163700 expressed protein -
16 Sobic.010G183400 down-regulated TF in developmental senescence(PubMedID : 27586543)@homeobox domain containing protein, expressed -
17 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G221700 psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed -
19 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
20 Sobic.004G250200 ORMM1(PubMedID : 24676859)@RNA recognition motif family protein, expressed -


Gene co-expression network
sample Sobic001G388400 Sobic001G388400 Sobic009G234200 Sobic009G234200 Sobic001G388400--Sobic009G234200 Sobic010G028000 Sobic010G028000 Sobic001G388400--Sobic010G028000 Sobic009G036300 Sobic009G036300 Sobic001G388400--Sobic009G036300 Sobic010G074200 Sobic010G074200 Sobic001G388400--Sobic010G074200 Sobic007G227600 Sobic007G227600 Sobic001G388400--Sobic007G227600 Sobic006G204100 Sobic006G204100 Sobic001G388400--Sobic006G204100 Sobic009G253000 Sobic009G253000 Sobic001G388400--Sobic009G253000 Sobic009G233800 Sobic009G233800 Sobic001G388400--Sobic009G233800 Sobic002G250100 Sobic002G250100 Sobic001G388400--Sobic002G250100 Sobic009G234200--Sobic001G388400 Sobic009G234200--Sobic010G028000 Sobic010G183400 Sobic010G183400 Sobic009G234200--Sobic010G183400 Sobic003G330100 Sobic003G330100 Sobic009G234200--Sobic003G330100 Sobic004G250200 Sobic004G250200 Sobic009G234200--Sobic004G250200 Sobic009G234200--Sobic006G204100 Sobic003G245800 Sobic003G245800 Sobic009G234200--Sobic003G245800 Sobic006G111600 Sobic006G111600 Sobic009G234200--Sobic006G111600 Sobic004G179200 Sobic004G179200 Sobic009G234200--Sobic004G179200 Sobic010G028000--Sobic001G388400 Sobic010G028000--Sobic009G234200 Sobic010G028000--Sobic006G204100 Sobic010G028000--Sobic010G074200 Sobic010G028000--Sobic009G036300 Sobic010G028000--Sobic007G227600 Sobic010G028000--Sobic003G330100 Sobic010G028000--Sobic003G245800 Sobic010G028000--Sobic010G183400 Sobic009G036300--Sobic007G227600 Sobic009G036300--Sobic001G388400 Sobic009G036300--Sobic010G074200 Sobic009G036300--Sobic010G028000 Sobic010G074100 Sobic010G074100 Sobic009G036300--Sobic010G074100 Sobic010G211500 Sobic010G211500 Sobic009G036300--Sobic010G211500 Sobic009G036300--Sobic009G234200 Sobic009G036300--Sobic006G204100 Sobic002G163700 Sobic002G163700 Sobic009G036300--Sobic002G163700 Sobic010G074200--Sobic006G204100 Sobic010G074200--Sobic010G074100 Sobic010G074200--Sobic001G388400 Sobic010G074200--Sobic009G233800 Sobic010G074200--Sobic009G036300 Sobic010G074200--Sobic010G028000 Sobic010G074200--Sobic007G227600 Sobic010G074200--Sobic009G234200 Sobic010G074200--Sobic003G330100 Sobic007G227600--Sobic010G074100 Sobic007G227600--Sobic009G036300 Sobic007G227600--Sobic001G388400 Sobic007G227600--Sobic009G234200 Sobic007G227600--Sobic010G028000 Sobic007G227600--Sobic010G074200 Sobic007G227600--Sobic009G253000 Sobic007G227600--Sobic010G211500 Sobic007G227600--Sobic002G163700 Sobic006G204100--Sobic010G074200 Sobic008G072300 Sobic008G072300 Sobic006G204100--Sobic008G072300 Sobic006G204100--Sobic001G388400 Sobic006G204100--Sobic009G234200 Sobic006G204100--Sobic003G330100 Sobic006G204100--Sobic009G233800 Sobic006G204100--Sobic010G028000 Sobic006G204100--Sobic007G227600 Sobic006G204100--Sobic004G250200 Sobic009G253000--Sobic001G388400 Sobic009G253000--Sobic007G227600 Sobic009G238100 Sobic009G238100 Sobic009G253000--Sobic009G238100 Sobic009G253000--Sobic010G074100 Sobic009G253000--Sobic009G036300 Sobic009G253000--Sobic010G028000 Sobic009G253000--Sobic009G233800 Sobic009G253000--Sobic010G074200 Sobic009G253000--Sobic006G204100 Sobic009G233800--Sobic010G074200 Sobic009G233800--Sobic006G204100 Sobic009G233800--Sobic001G388400 Sobic004G055600 Sobic004G055600 Sobic009G233800--Sobic004G055600 Sobic003G030400 Sobic003G030400 Sobic009G233800--Sobic003G030400 Sobic009G233800--Sobic010G074100 Sobic009G137000 Sobic009G137000 Sobic009G233800--Sobic009G137000 Sobic001G076200 Sobic001G076200 Sobic009G233800--Sobic001G076200 Sobic009G233800--Sobic010G028000 Sobic002G250100--Sobic003G245800 Sobic002G250100--Sobic001G388400 Sobic002G250100--Sobic002G163700 Sobic002G250100--Sobic010G028000 Sobic002G250100--Sobic009G234200 Sobic002G345200 Sobic002G345200 Sobic002G250100--Sobic002G345200 Sobic002G250100--Sobic007G227600 Sobic003G439600 Sobic003G439600 Sobic002G250100--Sobic003G439600 Sobic006G197700 Sobic006G197700 Sobic002G250100--Sobic006G197700
Octagon: transcription factors


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