Gene annotation
Transcriptome id Sobic.005G209000.1
Synonym GRAS2, SCL14, ATGRAS2, Sb05g026250
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt A0A1Z5RJS1
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G29060 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os11g47910.1 : SCARECROW, putative, expressed
MaizeGDB (Corn) Zm00025a029061 , Zm00025a029171
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G209000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G213200 PPR repeat domain containing protein, putative, expressed -
2 Sobic.006G153900 transporter, major facilitator family, putative, expressed -
3 Sobic.001G114400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoribosylformylglycinamidine synthase, putative, expressed K01952: PFAS, phosphoribosylformylglycinamidine synthase
4 Sobic.009G227900 expressed protein K10581: ubiquitin-conjugating enzyme E2 O
5 Sobic.009G178300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
6 Sobic.002G191100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
7 Sobic.010G113000 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
8 Sobic.007G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
9 Sobic.010G083900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsPOP12 - Putative Prolyl Oligopeptidase homologue, expressed -
10 Sobic.003G014700 pentatricopeptide, putative, expressed -
11 Sobic.002G378100 DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
12 Sobic.005G012700 expressed protein -
13 Sobic.006G231800 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
14 Sobic.002G373950 - -
15 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
16 Sobic.006G179000 growth regulator related protein, putative, expressed -
17 Sobic.009G245600 pentatricopeptide, putative, expressed -
18 Sobic.005G009300 expressed protein -
19 Sobic.008G078300 la domain containing protein, expressed K15191: La-related protein 7
20 Sobic.001G087100 far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome C, putative, expressed -


Gene co-expression network
sample Sobic005G209000 Sobic005G209000 Sobic009G213200 Sobic009G213200 Sobic005G209000--Sobic009G213200 Sobic006G153900 Sobic006G153900 Sobic005G209000--Sobic006G153900 Sobic001G114400 Sobic001G114400 Sobic005G209000--Sobic001G114400 Sobic009G227900 Sobic009G227900 Sobic005G209000--Sobic009G227900 Sobic009G178300 Sobic009G178300 Sobic005G209000--Sobic009G178300 Sobic002G191100 Sobic002G191100 Sobic005G209000--Sobic002G191100 Sobic010G113000 Sobic010G113000 Sobic005G209000--Sobic010G113000 Sobic007G202800 Sobic007G202800 Sobic005G209000--Sobic007G202800 Sobic010G083900 Sobic010G083900 Sobic005G209000--Sobic010G083900 Sobic006G185200 Sobic006G185200 Sobic009G213200--Sobic006G185200 Sobic002G378100 Sobic002G378100 Sobic009G213200--Sobic002G378100 Sobic007G097400 Sobic007G097400 Sobic009G213200--Sobic007G097400 Sobic001G214600 Sobic001G214600 Sobic009G213200--Sobic001G214600 Sobic002G373950 Sobic002G373950 Sobic009G213200--Sobic002G373950 Sobic010G147833 Sobic010G147833 Sobic009G213200--Sobic010G147833 Sobic005G160100 Sobic005G160100 Sobic009G213200--Sobic005G160100 Sobic006G231800 Sobic006G231800 Sobic009G213200--Sobic006G231800 Sobic009G251200 Sobic009G251200 Sobic009G213200--Sobic009G251200 Sobic001G498600 Sobic001G498600 Sobic006G153900--Sobic001G498600 Sobic007G065100 Sobic007G065100 Sobic006G153900--Sobic007G065100 Sobic002G425700 Sobic002G425700 Sobic006G153900--Sobic002G425700 Sobic001G178700 Sobic001G178700 Sobic006G153900--Sobic001G178700 Sobic010G112000 Sobic010G112000 Sobic006G153900--Sobic010G112000 Sobic006G131500 Sobic006G131500 Sobic006G153900--Sobic006G131500 Sobic001G291000 Sobic001G291000 Sobic006G153900--Sobic001G291000 Sobic010G000600 Sobic010G000600 Sobic006G153900--Sobic010G000600 Sobic001G384900 Sobic001G384900 Sobic006G153900--Sobic001G384900 Sobic003G222600 Sobic003G222600 Sobic001G114400--Sobic003G222600 Sobic001G114400--Sobic002G191100 Sobic003G030400 Sobic003G030400 Sobic001G114400--Sobic003G030400 Sobic009G036300 Sobic009G036300 Sobic001G114400--Sobic009G036300 Sobic004G070200 Sobic004G070200 Sobic001G114400--Sobic004G070200 Sobic008G148400 Sobic008G148400 Sobic001G114400--Sobic008G148400 Sobic010G039200 Sobic010G039200 Sobic001G114400--Sobic010G039200 Sobic003G324100 Sobic003G324100 Sobic001G114400--Sobic003G324100 Sobic010G211500 Sobic010G211500 Sobic001G114400--Sobic010G211500 Sobic006G281500 Sobic006G281500 Sobic009G227900--Sobic006G281500 Sobic006G047100 Sobic006G047100 Sobic009G227900--Sobic006G047100 Sobic002G008500 Sobic002G008500 Sobic009G227900--Sobic002G008500 Sobic009G227900--Sobic005G209000 Sobic001G485600 Sobic001G485600 Sobic009G227900--Sobic001G485600 Sobic001G276200 Sobic001G276200 Sobic009G227900--Sobic001G276200 Sobic009G227900--Sobic010G113000 Sobic004G175200 Sobic004G175200 Sobic009G227900--Sobic004G175200 Sobic009G227900--Sobic009G213200 Sobic007G002300 Sobic007G002300 Sobic009G178300--Sobic007G002300 Sobic009G178300--Sobic006G153900 Sobic010G021000 Sobic010G021000 Sobic009G178300--Sobic010G021000 Sobic009G178300--Sobic001G384900 Sobic001G275900 Sobic001G275900 Sobic009G178300--Sobic001G275900 Sobic004G030100 Sobic004G030100 Sobic009G178300--Sobic004G030100 Sobic002G164800 Sobic002G164800 Sobic009G178300--Sobic002G164800 Sobic004G018300 Sobic004G018300 Sobic009G178300--Sobic004G018300 Sobic003G141500 Sobic003G141500 Sobic009G178300--Sobic003G141500 Sobic002G191100--Sobic001G114400 Sobic002G181132 Sobic002G181132 Sobic002G191100--Sobic002G181132 Sobic003G162800 Sobic003G162800 Sobic002G191100--Sobic003G162800 Sobic008G038600 Sobic008G038600 Sobic002G191100--Sobic008G038600 Sobic003G039300 Sobic003G039300 Sobic002G191100--Sobic003G039300 Sobic003G345900 Sobic003G345900 Sobic002G191100--Sobic003G345900 Sobic007G137800 Sobic007G137800 Sobic002G191100--Sobic007G137800 Sobic009G214200 Sobic009G214200 Sobic002G191100--Sobic009G214200 Sobic002G191100--Sobic004G070200 Sobic009G148900 Sobic009G148900 Sobic010G113000--Sobic009G148900 Sobic007G029100 Sobic007G029100 Sobic010G113000--Sobic007G029100 Sobic007G110200 Sobic007G110200 Sobic010G113000--Sobic007G110200 Sobic003G222300 Sobic003G222300 Sobic010G113000--Sobic003G222300 Sobic009G029700 Sobic009G029700 Sobic010G113000--Sobic009G029700 Sobic009G017400 Sobic009G017400 Sobic010G113000--Sobic009G017400 Sobic008G001400 Sobic008G001400 Sobic010G113000--Sobic008G001400 Sobic010G113000--Sobic006G153900 Sobic001G380500 Sobic001G380500 Sobic010G113000--Sobic001G380500 Sobic007G120401 Sobic007G120401 Sobic007G202800--Sobic007G120401 Sobic007G202800--Sobic005G209000 Sobic007G189500 Sobic007G189500 Sobic007G202800--Sobic007G189500 Sobic001G087100 Sobic001G087100 Sobic007G202800--Sobic001G087100 Sobic001G240300 Sobic001G240300 Sobic007G202800--Sobic001G240300 Sobic009G154600 Sobic009G154600 Sobic007G202800--Sobic009G154600 Sobic010G057300 Sobic010G057300 Sobic007G202800--Sobic010G057300 Sobic006G228700 Sobic006G228700 Sobic007G202800--Sobic006G228700 Sobic007G202800--Sobic010G083900 Sobic010G083900--Sobic002G378100 Sobic001G322600 Sobic001G322600 Sobic010G083900--Sobic001G322600 Sobic001G049800 Sobic001G049800 Sobic010G083900--Sobic001G049800 Sobic001G422500 Sobic001G422500 Sobic010G083900--Sobic001G422500 Sobic010G224700 Sobic010G224700 Sobic010G083900--Sobic010G224700 Sobic004G151000 Sobic004G151000 Sobic010G083900--Sobic004G151000 Sobic003G014700 Sobic003G014700 Sobic010G083900--Sobic003G014700 Sobic005G028300 Sobic005G028300 Sobic010G083900--Sobic005G028300 Sobic001G119600 Sobic001G119600 Sobic010G083900--Sobic001G119600
Octagon: transcription factors


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