Gene annotation
Transcriptome id Sobic.009G178300.1,Sobic.009G178300.2,Sobic.009G178300.4,Sobic.009G178300.3
Synonym Sb09g023855
Functional annotation endonuclease/exonuclease/phosphatase family domain containing protein, expressed
UniProt A0A1B6P924 , C5YZX2
Pfam PF03372
Panther DB PTHR11200 PTHR11200:SF150
NCBI CDD KOG0565; Inositol polyphosphate 5-phosphatase and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G04980 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os05g41000.1 : endonuclease/exonuclease/phosphatase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005274 , Zm00025a044056
Brachypodium PNT73088 , PNT73089 , KQK05682 , PNT73084 , PNT73085 , PNT73086 , PNT73087 , PNT73081 , PNT73082 , PNT73083 , KQK10278 , PNT73080 , KQK10277 , KQK10276 , KQK10275 , PNT73090 , PNT73079
Barley HORVU1Hr1G068860.7 , HORVU1Hr1G068860.6 , HORVU1Hr1G068860.5 , HORVU1Hr1G068860.4 , HORVU1Hr1G068860.3 , HORVU1Hr1G068860.2 , HORVU1Hr1G068860.8 , HORVU3Hr1G079850.29 , HORVU3Hr1G079850.28 , HORVU3Hr1G079850.21 , HORVU3Hr1G079850.20 , HORVU3Hr1G079850.23 , HORVU3Hr1G079850.22 , HORVU3Hr1G079850.25 , HORVU3Hr1G079850.24 , HORVU3Hr1G079850.27 , HORVU3Hr1G079850.26 , HORVU1Hr1G068860.1 , HORVU3Hr1G079850.38 , HORVU3Hr1G079850.39 , HORVU3Hr1G079850.36 , HORVU3Hr1G079850.37 , HORVU3Hr1G079850.34 , HORVU3Hr1G079850.35 , HORVU3Hr1G079850.32 , HORVU3Hr1G079850.33 , HORVU3Hr1G079850.30 , HORVU3Hr1G079850.31 , HORVU3Hr1G079850.49 , HORVU3Hr1G079850.48 , HORVU3Hr1G079850.43 , HORVU3Hr1G079850.42 , HORVU3Hr1G079850.41 , HORVU3Hr1G079850.40 , HORVU3Hr1G079850.47 , HORVU3Hr1G079850.46 , HORVU3Hr1G079850.45 , HORVU3Hr1G079850.44 , HORVU3Hr1G079850.50 , HORVU3Hr1G079850.14 , HORVU3Hr1G079850.15 , HORVU3Hr1G079850.16 , HORVU3Hr1G079850.17 , HORVU3Hr1G079850.10 , HORVU3Hr1G079850.11 , HORVU3Hr1G079850.12 , HORVU3Hr1G079850.13 , HORVU3Hr1G079850.18 , HORVU3Hr1G079850.19 , HORVU3Hr1G079850.8 , HORVU3Hr1G079850.9 , HORVU3Hr1G079850.6 , HORVU3Hr1G079850.7 , HORVU3Hr1G079850.4 , HORVU3Hr1G079850.5 , HORVU3Hr1G079850.2 , HORVU3Hr1G079850.3 , HORVU3Hr1G079850.1
Wheat TraesCS1B02G316500 , TraesCS1B02G316500 , TraesCS3B02G369700 , TraesCS3B02G369700 , TraesCS1A02G305800 , TraesCS1A02G305800 , TraesCS3D02G331600 , TraesCS3D02G331600 , TraesCS3A02G338100 , TraesCS3A02G338100 , TraesCS3A02G338100 , TraesCS3A02G338100 , TraesCS1D02G305500
Populus -


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cDNA sequences
Sobic.009G178300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G002300 protein kinase family protein, putative, expressed K17535: serine/threonine-protein kinase TNNI3K
2 Sobic.006G153900 transporter, major facilitator family, putative, expressed -
3 Sobic.010G021000 expressed protein -
4 Sobic.001G384900 hypothetical protein K09250: cellular nucleic acid-binding protein
5 Sobic.001G275900 calcium-transporting ATPase, plasma membrane-type, putative, expressed -
6 Sobic.004G030100 glycosyltransferase, putative, expressed -
7 Sobic.002G164800 SET domain containing protein, expressed K11423: [histone H3]-dimethyl-L-lysine36 N-methyltransferase
8 Sobic.004G018300 expressed protein K06970: 23S rRNA (adenine1618-N6)-methyltransferase
9 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
10 Sobic.009G050900 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
11 Sobic.001G389800 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
12 Sobic.010G256800 - -
13 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
14 Sobic.001G017600 protein of unknown function containing protein, expressed -
15 Sobic.009G005100 - -
16 Sobic.004G087600 RNA recognition motif containing protein, putative, expressed -
17 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
18 Sobic.009G103600 MEE12, putative, expressed -
19 Sobic.007G161800 kinase, pfkB family, putative, expressed -
20 Sobic.004G225000 -(PubMedID : 27964718)@nitrilase, putative, expressed K01501: nitrilase


Gene co-expression network
sample Sobic009G178300 Sobic009G178300 Sobic007G002300 Sobic007G002300 Sobic009G178300--Sobic007G002300 Sobic006G153900 Sobic006G153900 Sobic009G178300--Sobic006G153900 Sobic010G021000 Sobic010G021000 Sobic009G178300--Sobic010G021000 Sobic001G384900 Sobic001G384900 Sobic009G178300--Sobic001G384900 Sobic001G275900 Sobic001G275900 Sobic009G178300--Sobic001G275900 Sobic004G030100 Sobic004G030100 Sobic009G178300--Sobic004G030100 Sobic002G164800 Sobic002G164800 Sobic009G178300--Sobic002G164800 Sobic004G018300 Sobic004G018300 Sobic009G178300--Sobic004G018300 Sobic003G141500 Sobic003G141500 Sobic009G178300--Sobic003G141500 Sobic007G002300--Sobic004G030100 Sobic003G280800 Sobic003G280800 Sobic007G002300--Sobic003G280800 Sobic002G143500 Sobic002G143500 Sobic007G002300--Sobic002G143500 Sobic006G058100 Sobic006G058100 Sobic007G002300--Sobic006G058100 Sobic007G002300--Sobic003G141500 Sobic009G047200 Sobic009G047200 Sobic007G002300--Sobic009G047200 Sobic002G313400 Sobic002G313400 Sobic007G002300--Sobic002G313400 Sobic001G071400 Sobic001G071400 Sobic007G002300--Sobic001G071400 Sobic002G396000 Sobic002G396000 Sobic007G002300--Sobic002G396000 Sobic001G498600 Sobic001G498600 Sobic006G153900--Sobic001G498600 Sobic007G065100 Sobic007G065100 Sobic006G153900--Sobic007G065100 Sobic002G425700 Sobic002G425700 Sobic006G153900--Sobic002G425700 Sobic001G178700 Sobic001G178700 Sobic006G153900--Sobic001G178700 Sobic010G112000 Sobic010G112000 Sobic006G153900--Sobic010G112000 Sobic006G131500 Sobic006G131500 Sobic006G153900--Sobic006G131500 Sobic001G291000 Sobic001G291000 Sobic006G153900--Sobic001G291000 Sobic010G000600 Sobic010G000600 Sobic006G153900--Sobic010G000600 Sobic006G153900--Sobic001G384900 Sobic010G256932 Sobic010G256932 Sobic010G021000--Sobic010G256932 Sobic010G256800 Sobic010G256800 Sobic010G021000--Sobic010G256800 Sobic002G301500 Sobic002G301500 Sobic010G021000--Sobic002G301500 Sobic010G021000--Sobic009G178300 Sobic008G133400 Sobic008G133400 Sobic010G021000--Sobic008G133400 Sobic010G084000 Sobic010G084000 Sobic010G021000--Sobic010G084000 Sobic007G031800 Sobic007G031800 Sobic010G021000--Sobic007G031800 Sobic001G017600 Sobic001G017600 Sobic010G021000--Sobic001G017600 Sobic003G142700 Sobic003G142700 Sobic010G021000--Sobic003G142700 Sobic010G005600 Sobic010G005600 Sobic001G384900--Sobic010G005600 Sobic005G106500 Sobic005G106500 Sobic001G384900--Sobic005G106500 Sobic009G050900 Sobic009G050900 Sobic001G384900--Sobic009G050900 Sobic001G384900--Sobic006G153900 Sobic002G351900 Sobic002G351900 Sobic001G384900--Sobic002G351900 Sobic008G166300 Sobic008G166300 Sobic001G384900--Sobic008G166300 Sobic001G081000 Sobic001G081000 Sobic001G384900--Sobic001G081000 Sobic001G384900--Sobic004G018300 Sobic001G384900--Sobic009G178300 Sobic001G281600 Sobic001G281600 Sobic001G275900--Sobic001G281600 Sobic001G201400 Sobic001G201400 Sobic001G275900--Sobic001G201400 Sobic001G000200 Sobic001G000200 Sobic001G275900--Sobic001G000200 Sobic008G083000 Sobic008G083000 Sobic001G275900--Sobic008G083000 Sobic002G092300 Sobic002G092300 Sobic001G275900--Sobic002G092300 Sobic003G176600 Sobic003G176600 Sobic001G275900--Sobic003G176600 Sobic006G114500 Sobic006G114500 Sobic001G275900--Sobic006G114500 Sobic004G021200 Sobic004G021200 Sobic001G275900--Sobic004G021200 Sobic002G317300 Sobic002G317300 Sobic001G275900--Sobic002G317300 Sobic004G030100--Sobic007G002300 Sobic004G030100--Sobic006G058100 Sobic004G030100--Sobic010G005600 Sobic004G030100--Sobic002G143500 Sobic010G175500 Sobic010G175500 Sobic004G030100--Sobic010G175500 Sobic004G030100--Sobic009G178300 Sobic004G030100--Sobic001G000200 Sobic004G030100--Sobic004G021200 Sobic001G261200 Sobic001G261200 Sobic004G030100--Sobic001G261200 Sobic001G219900 Sobic001G219900 Sobic002G164800--Sobic001G219900 Sobic001G352900 Sobic001G352900 Sobic002G164800--Sobic001G352900 Sobic002G164800--Sobic004G018300 Sobic007G031600 Sobic007G031600 Sobic002G164800--Sobic007G031600 Sobic008G131000 Sobic008G131000 Sobic002G164800--Sobic008G131000 Sobic002G164800--Sobic008G083000 Sobic002G164800--Sobic009G047200 Sobic002G164800--Sobic002G396000 Sobic009G260500 Sobic009G260500 Sobic002G164800--Sobic009G260500 Sobic004G087600 Sobic004G087600 Sobic004G018300--Sobic004G087600 Sobic001G167200 Sobic001G167200 Sobic004G018300--Sobic001G167200 Sobic008G011100 Sobic008G011100 Sobic004G018300--Sobic008G011100 Sobic002G158700 Sobic002G158700 Sobic004G018300--Sobic002G158700 Sobic004G018300--Sobic002G396000 Sobic004G018300--Sobic001G081000 Sobic004G018300--Sobic008G083000 Sobic009G126400 Sobic009G126400 Sobic004G018300--Sobic009G126400 Sobic004G223600 Sobic004G223600 Sobic004G018300--Sobic004G223600 Sobic001G219600 Sobic001G219600 Sobic003G141500--Sobic001G219600 Sobic008G047800 Sobic008G047800 Sobic003G141500--Sobic008G047800 Sobic003G141500--Sobic009G050900 Sobic001G493200 Sobic001G493200 Sobic003G141500--Sobic001G493200 Sobic003G141500--Sobic002G143500 Sobic003G443100 Sobic003G443100 Sobic003G141500--Sobic003G443100 Sobic003G141500--Sobic009G126400 Sobic003G141500--Sobic001G071400 Sobic006G200600 Sobic006G200600 Sobic003G141500--Sobic006G200600
Octagon: transcription factors


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