Gene annotation
Transcriptome id Sobic.007G002300.2,Sobic.007G002300.1
Synonym Sb07g000410
Functional annotation protein kinase family protein, putative, expressed
UniProt A0A1Z5R7J1 , A0A1B6PEQ5
Pfam PF01842 PF07714
Panther DB PTHR23257 PTHR23257:SF516
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs KOG0984Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6
KEGG Orthology K17535; serine/threonine-protein kinase TNNI3K
Gene Ontology GO:0016597; amino acid binding GO:0008152metabolic process GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G17700 : ACT-like protein tyrosine kinase family protein
RAP-DB (Rice) LOC_Os08g01270.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a033669
Brachypodium KQJ94767
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G002300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G030100 glycosyltransferase, putative, expressed -
2 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
3 Sobic.002G143500 sulfate transporter 4.1, chloroplast precursor, putative, expressed K18059: sulfate transporter 4
4 Sobic.006G058100 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
5 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
6 Sobic.009G047200 protein kinase domain containing protein, expressed -
7 Sobic.002G313400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12815: DHX38, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16
8 Sobic.001G071400 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
9 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1
10 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
11 Sobic.007G161800 kinase, pfkB family, putative, expressed -
12 Sobic.K042000 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
13 Sobic.009G178300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
14 Sobic.004G359800 inositol-1-monophosphatase, putative, expressed -
15 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
16 Sobic.003G252200 DDT, putative, expressed -
17 Sobic.006G209850 - -
18 Sobic.008G024600 expressed protein -
19 Sobic.004G225000 -(PubMedID : 27964718)@nitrilase, putative, expressed K01501: nitrilase
20 Sobic.009G005100 - -


Gene co-expression network
sample Sobic007G002300 Sobic007G002300 Sobic004G030100 Sobic004G030100 Sobic007G002300--Sobic004G030100 Sobic003G280800 Sobic003G280800 Sobic007G002300--Sobic003G280800 Sobic002G143500 Sobic002G143500 Sobic007G002300--Sobic002G143500 Sobic006G058100 Sobic006G058100 Sobic007G002300--Sobic006G058100 Sobic003G141500 Sobic003G141500 Sobic007G002300--Sobic003G141500 Sobic009G047200 Sobic009G047200 Sobic007G002300--Sobic009G047200 Sobic002G313400 Sobic002G313400 Sobic007G002300--Sobic002G313400 Sobic001G071400 Sobic001G071400 Sobic007G002300--Sobic001G071400 Sobic002G396000 Sobic002G396000 Sobic007G002300--Sobic002G396000 Sobic004G030100--Sobic007G002300 Sobic004G030100--Sobic006G058100 Sobic010G005600 Sobic010G005600 Sobic004G030100--Sobic010G005600 Sobic004G030100--Sobic002G143500 Sobic010G175500 Sobic010G175500 Sobic004G030100--Sobic010G175500 Sobic009G178300 Sobic009G178300 Sobic004G030100--Sobic009G178300 Sobic001G000200 Sobic001G000200 Sobic004G030100--Sobic001G000200 Sobic004G021200 Sobic004G021200 Sobic004G030100--Sobic004G021200 Sobic001G261200 Sobic001G261200 Sobic004G030100--Sobic001G261200 Sobic002G309600 Sobic002G309600 Sobic003G280800--Sobic002G309600 Sobic003G280800--Sobic001G071400 Sobic002G134200 Sobic002G134200 Sobic003G280800--Sobic002G134200 Sobic006G209850 Sobic006G209850 Sobic003G280800--Sobic006G209850 Sobic003G119000 Sobic003G119000 Sobic003G280800--Sobic003G119000 Sobic001G474600 Sobic001G474600 Sobic003G280800--Sobic001G474600 Sobic007G117400 Sobic007G117400 Sobic003G280800--Sobic007G117400 Sobic006G216800 Sobic006G216800 Sobic003G280800--Sobic006G216800 Sobic003G372700 Sobic003G372700 Sobic003G280800--Sobic003G372700 Sobic001G166600 Sobic001G166600 Sobic002G143500--Sobic001G166600 Sobic002G143500--Sobic006G216800 Sobic001G219600 Sobic001G219600 Sobic002G143500--Sobic001G219600 Sobic002G143500--Sobic006G058100 Sobic002G143500--Sobic001G071400 Sobic007G116200 Sobic007G116200 Sobic002G143500--Sobic007G116200 Sobic002G143500--Sobic003G141500 Sobic002G143500--Sobic003G280800 Sobic009G126400 Sobic009G126400 Sobic002G143500--Sobic009G126400 Sobic006G058100--Sobic002G143500 Sobic003G067100 Sobic003G067100 Sobic006G058100--Sobic003G067100 Sobic003G040000 Sobic003G040000 Sobic006G058100--Sobic003G040000 Sobic006G058100--Sobic001G166600 Sobic004G236400 Sobic004G236400 Sobic006G058100--Sobic004G236400 Sobic001G261573 Sobic001G261573 Sobic006G058100--Sobic001G261573 Sobic010G176550 Sobic010G176550 Sobic006G058100--Sobic010G176550 Sobic004G225600 Sobic004G225600 Sobic006G058100--Sobic004G225600 Sobic009G094900 Sobic009G094900 Sobic006G058100--Sobic009G094900 Sobic003G141500--Sobic001G219600 Sobic008G047800 Sobic008G047800 Sobic003G141500--Sobic008G047800 Sobic009G050900 Sobic009G050900 Sobic003G141500--Sobic009G050900 Sobic001G493200 Sobic001G493200 Sobic003G141500--Sobic001G493200 Sobic003G141500--Sobic002G143500 Sobic003G443100 Sobic003G443100 Sobic003G141500--Sobic003G443100 Sobic003G141500--Sobic009G126400 Sobic003G141500--Sobic001G071400 Sobic006G200600 Sobic006G200600 Sobic003G141500--Sobic006G200600 Sobic009G047200--Sobic001G219600 Sobic003G072200 Sobic003G072200 Sobic009G047200--Sobic003G072200 Sobic002G397500 Sobic002G397500 Sobic009G047200--Sobic002G397500 Sobic003G408600 Sobic003G408600 Sobic009G047200--Sobic003G408600 Sobic009G047200--Sobic001G071400 Sobic001G002000 Sobic001G002000 Sobic009G047200--Sobic001G002000 Sobic004G329400 Sobic004G329400 Sobic009G047200--Sobic004G329400 Sobic002G317200 Sobic002G317200 Sobic009G047200--Sobic002G317200 Sobic009G047200--Sobic002G309600 Sobic002G313400--Sobic001G219600 Sobic009G260500 Sobic009G260500 Sobic002G313400--Sobic009G260500 Sobic002G313400--Sobic002G309600 Sobic008G011100 Sobic008G011100 Sobic002G313400--Sobic008G011100 Sobic002G313400--Sobic001G002000 Sobic002G313400--Sobic007G117400 Sobic001G111600 Sobic001G111600 Sobic002G313400--Sobic001G111600 Sobic002G313400--Sobic008G047800 Sobic002G313400--Sobic001G493200 Sobic001G071400--Sobic002G134200 Sobic001G071400--Sobic002G309600 Sobic001G071400--Sobic003G280800 Sobic001G071400--Sobic008G047800 Sobic009G191000 Sobic009G191000 Sobic001G071400--Sobic009G191000 Sobic001G071400--Sobic001G219600 Sobic005G112300 Sobic005G112300 Sobic001G071400--Sobic005G112300 Sobic002G315200 Sobic002G315200 Sobic001G071400--Sobic002G315200 Sobic002G008900 Sobic002G008900 Sobic001G071400--Sobic002G008900 Sobic002G158700 Sobic002G158700 Sobic002G396000--Sobic002G158700 Sobic006G128900 Sobic006G128900 Sobic002G396000--Sobic006G128900 Sobic007G096000 Sobic007G096000 Sobic002G396000--Sobic007G096000 Sobic002G396000--Sobic003G280800 Sobic001G511500 Sobic001G511500 Sobic002G396000--Sobic001G511500 Sobic009G210500 Sobic009G210500 Sobic002G396000--Sobic009G210500 Sobic004G018300 Sobic004G018300 Sobic002G396000--Sobic004G018300 Sobic008G131000 Sobic008G131000 Sobic002G396000--Sobic008G131000 Sobic001G090400 Sobic001G090400 Sobic002G396000--Sobic001G090400
Octagon: transcription factors


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