Gene annotation
Transcriptome id Sobic.004G030100.1,Sobic.004G030100.2
Synonym Sb04g002630
Functional annotation glycosyltransferase, putative, expressed
UniProt A0A194YMF1 , A0A194YNI3
Pfam -
Panther DB PTHR11922 PTHR11922:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70570 : anthranilate phosphoribosyltransferase, putative
RAP-DB (Rice) LOC_Os02g03850.1 : glycosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a018847 , Zm00025a034997
Brachypodium KQJ93130
Barley HORVU6Hr1G016810.8 , HORVU6Hr1G016810.9 , HORVU6Hr1G016810.1 , HORVU6Hr1G016810.2 , HORVU6Hr1G016810.3 , HORVU6Hr1G016810.5 , HORVU6Hr1G016810.6 , HORVU6Hr1G016810.7 , HORVU6Hr1G016810.13 , HORVU6Hr1G016810.11 , HORVU6Hr1G016810.14
Wheat TraesCS6B02G121900 , TraesCS6A02G093100 , TraesCS6D02G089300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G030100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G002300 protein kinase family protein, putative, expressed K17535: serine/threonine-protein kinase TNNI3K
2 Sobic.006G058100 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
3 Sobic.010G005600 SEC14 cytosolic factor family protein, putative, expressed -
4 Sobic.002G143500 sulfate transporter 4.1, chloroplast precursor, putative, expressed K18059: sulfate transporter 4
5 Sobic.010G175500 expressed protein -
6 Sobic.009G178300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
7 Sobic.001G000200 TBC domain containing protein, expressed -
8 Sobic.004G021200 expressed protein -
9 Sobic.001G261200 copper/zinc superoxide dismutase(PubMedID : 23915383)@transporter family protein, putative, expressed -
10 Sobic.002G313400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12815: DHX38, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16
11 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
12 Sobic.001G186800 ATPAP18/PAP18, putative, expressed -
13 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
14 Sobic.001G383300 ABC transporter, ATP-binding protein, putative, expressed K05663: ATP-binding cassette, subfamily B, mitochondrial transporter ATM
15 Sobic.007G194300 sulfite oxidase, putative, expressed K00387: sulfite oxidase
16 Sobic.007G161800 kinase, pfkB family, putative, expressed -
17 Sobic.001G384900 hypothetical protein K09250: cellular nucleic acid-binding protein
18 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
19 Sobic.002G351900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
20 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta


Gene co-expression network
sample Sobic004G030100 Sobic004G030100 Sobic007G002300 Sobic007G002300 Sobic004G030100--Sobic007G002300 Sobic006G058100 Sobic006G058100 Sobic004G030100--Sobic006G058100 Sobic010G005600 Sobic010G005600 Sobic004G030100--Sobic010G005600 Sobic002G143500 Sobic002G143500 Sobic004G030100--Sobic002G143500 Sobic010G175500 Sobic010G175500 Sobic004G030100--Sobic010G175500 Sobic009G178300 Sobic009G178300 Sobic004G030100--Sobic009G178300 Sobic001G000200 Sobic001G000200 Sobic004G030100--Sobic001G000200 Sobic004G021200 Sobic004G021200 Sobic004G030100--Sobic004G021200 Sobic001G261200 Sobic001G261200 Sobic004G030100--Sobic001G261200 Sobic007G002300--Sobic004G030100 Sobic003G280800 Sobic003G280800 Sobic007G002300--Sobic003G280800 Sobic007G002300--Sobic002G143500 Sobic007G002300--Sobic006G058100 Sobic003G141500 Sobic003G141500 Sobic007G002300--Sobic003G141500 Sobic009G047200 Sobic009G047200 Sobic007G002300--Sobic009G047200 Sobic002G313400 Sobic002G313400 Sobic007G002300--Sobic002G313400 Sobic001G071400 Sobic001G071400 Sobic007G002300--Sobic001G071400 Sobic002G396000 Sobic002G396000 Sobic007G002300--Sobic002G396000 Sobic006G058100--Sobic002G143500 Sobic003G067100 Sobic003G067100 Sobic006G058100--Sobic003G067100 Sobic003G040000 Sobic003G040000 Sobic006G058100--Sobic003G040000 Sobic001G166600 Sobic001G166600 Sobic006G058100--Sobic001G166600 Sobic004G236400 Sobic004G236400 Sobic006G058100--Sobic004G236400 Sobic001G261573 Sobic001G261573 Sobic006G058100--Sobic001G261573 Sobic010G176550 Sobic010G176550 Sobic006G058100--Sobic010G176550 Sobic004G225600 Sobic004G225600 Sobic006G058100--Sobic004G225600 Sobic009G094900 Sobic009G094900 Sobic006G058100--Sobic009G094900 Sobic007G052900 Sobic007G052900 Sobic010G005600--Sobic007G052900 Sobic010G005600--Sobic010G176550 Sobic002G031400 Sobic002G031400 Sobic010G005600--Sobic002G031400 Sobic001G159400 Sobic001G159400 Sobic010G005600--Sobic001G159400 Sobic004G174400 Sobic004G174400 Sobic010G005600--Sobic004G174400 Sobic009G215800 Sobic009G215800 Sobic010G005600--Sobic009G215800 Sobic002G351900 Sobic002G351900 Sobic010G005600--Sobic002G351900 Sobic001G384900 Sobic001G384900 Sobic010G005600--Sobic001G384900 Sobic010G056200 Sobic010G056200 Sobic010G005600--Sobic010G056200 Sobic002G143500--Sobic001G166600 Sobic006G216800 Sobic006G216800 Sobic002G143500--Sobic006G216800 Sobic001G219600 Sobic001G219600 Sobic002G143500--Sobic001G219600 Sobic002G143500--Sobic006G058100 Sobic002G143500--Sobic001G071400 Sobic007G116200 Sobic007G116200 Sobic002G143500--Sobic007G116200 Sobic002G143500--Sobic003G141500 Sobic002G143500--Sobic003G280800 Sobic009G126400 Sobic009G126400 Sobic002G143500--Sobic009G126400 Sobic010G138000 Sobic010G138000 Sobic010G175500--Sobic010G138000 Sobic002G169900 Sobic002G169900 Sobic010G175500--Sobic002G169900 Sobic007G103100 Sobic007G103100 Sobic010G175500--Sobic007G103100 Sobic003G381200 Sobic003G381200 Sobic010G175500--Sobic003G381200 Sobic010G175400 Sobic010G175400 Sobic010G175500--Sobic010G175400 Sobic005G014700 Sobic005G014700 Sobic010G175500--Sobic005G014700 Sobic010G175500--Sobic004G030100 Sobic010G175500--Sobic001G159400 Sobic002G276100 Sobic002G276100 Sobic010G175500--Sobic002G276100 Sobic009G178300--Sobic007G002300 Sobic006G153900 Sobic006G153900 Sobic009G178300--Sobic006G153900 Sobic010G021000 Sobic010G021000 Sobic009G178300--Sobic010G021000 Sobic009G178300--Sobic001G384900 Sobic001G275900 Sobic001G275900 Sobic009G178300--Sobic001G275900 Sobic009G178300--Sobic004G030100 Sobic002G164800 Sobic002G164800 Sobic009G178300--Sobic002G164800 Sobic004G018300 Sobic004G018300 Sobic009G178300--Sobic004G018300 Sobic009G178300--Sobic003G141500 Sobic009G199200 Sobic009G199200 Sobic001G000200--Sobic009G199200 Sobic010G205800 Sobic010G205800 Sobic001G000200--Sobic010G205800 Sobic006G237400 Sobic006G237400 Sobic001G000200--Sobic006G237400 Sobic001G253700 Sobic001G253700 Sobic001G000200--Sobic001G253700 Sobic008G004600 Sobic008G004600 Sobic001G000200--Sobic008G004600 Sobic003G233600 Sobic003G233600 Sobic001G000200--Sobic003G233600 Sobic001G291000 Sobic001G291000 Sobic001G000200--Sobic001G291000 Sobic001G079200 Sobic001G079200 Sobic001G000200--Sobic001G079200 Sobic001G000200--Sobic001G071400 Sobic003G266001 Sobic003G266001 Sobic004G021200--Sobic003G266001 Sobic008G103200 Sobic008G103200 Sobic004G021200--Sobic008G103200 Sobic010G279700 Sobic010G279700 Sobic004G021200--Sobic010G279700 Sobic001G281600 Sobic001G281600 Sobic004G021200--Sobic001G281600 Sobic008G083000 Sobic008G083000 Sobic004G021200--Sobic008G083000 Sobic006G273200 Sobic006G273200 Sobic004G021200--Sobic006G273200 Sobic005G106500 Sobic005G106500 Sobic004G021200--Sobic005G106500 Sobic007G096000 Sobic007G096000 Sobic004G021200--Sobic007G096000 Sobic002G310200 Sobic002G310200 Sobic004G021200--Sobic002G310200 Sobic001G280900 Sobic001G280900 Sobic001G261200--Sobic001G280900 Sobic001G261200--Sobic006G058100 Sobic001G261200--Sobic004G236400 Sobic004G329400 Sobic004G329400 Sobic001G261200--Sobic004G329400 Sobic001G222500 Sobic001G222500 Sobic001G261200--Sobic001G222500 Sobic001G016600 Sobic001G016600 Sobic001G261200--Sobic001G016600 Sobic002G161900 Sobic002G161900 Sobic001G261200--Sobic002G161900 Sobic001G334700 Sobic001G334700 Sobic001G261200--Sobic001G334700 Sobic001G125200 Sobic001G125200 Sobic001G261200--Sobic001G125200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.