Gene annotation
Transcriptome id Sobic.007G194300.1
Synonym SOX, AT-SO, Sb07g026290, AtSO
Functional annotation sulfite oxidase, putative, expressed
UniProt C5YI27
Pfam PF03404 PF00174
Panther DB PTHR19372 PTHR19372:SF8
NCBI CDD -
KEGG Orthology K00387; sulfite oxidase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G01910 : sulfite oxidase
RAP-DB (Rice) LOC_Os08g41830.1 : sulfite oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a005257
Brachypodium KQJ99109
Barley HORVU7Hr1G054060.8 , HORVU7Hr1G054060.9 , HORVU7Hr1G054060.2 , HORVU7Hr1G054060.3 , HORVU7Hr1G054060.1 , HORVU7Hr1G054060.6 , HORVU7Hr1G054060.7 , HORVU7Hr1G054060.4 , HORVU7Hr1G054060.5 , HORVU7Hr1G054060.10
Wheat TraesCS7A02G259700 , TraesCS7A02G259700 , TraesCS7A02G259700 , TraesCS7D02G260700 , TraesCS7D02G260700 , TraesCS7B02G157800 , TraesCS7B02G157800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G143500 sulfate transporter 4.1, chloroplast precursor, putative, expressed K18059: sulfate transporter 4
2 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
3 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
4 Sobic.001G002000 protein kinase domain containing protein, expressed -
5 Sobic.001G227200 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
6 Sobic.009G094900 sugar porter, putative, expressed -
7 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
8 Sobic.002G343901 - -
9 Sobic.010G277500 expressed protein -
10 Sobic.003G443100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
11 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
12 Sobic.009G040600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
13 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
14 Sobic.004G140600 exonuclease, putative, expressed K13288: orn, REX2, oligoribonuclease
15 Sobic.007G203200 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
16 Sobic.009G245800 protein of unknown function DUF1296 domain containing protein, expressed -
17 Sobic.003G332800 GTPase-activating protein, putative, expressed -
18 Sobic.006G058100 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
19 Sobic.004G027800 beta-amylase, putative, expressed -
20 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein


Gene co-expression network
sample Sobic007G194300 Sobic007G194300 Sobic002G143500 Sobic002G143500 Sobic007G194300--Sobic002G143500 Sobic005G106500 Sobic005G106500 Sobic007G194300--Sobic005G106500 Sobic003G141500 Sobic003G141500 Sobic007G194300--Sobic003G141500 Sobic001G002000 Sobic001G002000 Sobic007G194300--Sobic001G002000 Sobic001G227200 Sobic001G227200 Sobic007G194300--Sobic001G227200 Sobic009G094900 Sobic009G094900 Sobic007G194300--Sobic009G094900 Sobic008G047800 Sobic008G047800 Sobic007G194300--Sobic008G047800 Sobic002G343901 Sobic002G343901 Sobic007G194300--Sobic002G343901 Sobic010G277500 Sobic010G277500 Sobic007G194300--Sobic010G277500 Sobic001G166600 Sobic001G166600 Sobic002G143500--Sobic001G166600 Sobic006G216800 Sobic006G216800 Sobic002G143500--Sobic006G216800 Sobic001G219600 Sobic001G219600 Sobic002G143500--Sobic001G219600 Sobic006G058100 Sobic006G058100 Sobic002G143500--Sobic006G058100 Sobic001G071400 Sobic001G071400 Sobic002G143500--Sobic001G071400 Sobic007G116200 Sobic007G116200 Sobic002G143500--Sobic007G116200 Sobic002G143500--Sobic003G141500 Sobic003G280800 Sobic003G280800 Sobic002G143500--Sobic003G280800 Sobic009G126400 Sobic009G126400 Sobic002G143500--Sobic009G126400 Sobic005G106500--Sobic001G227200 Sobic004G140600 Sobic004G140600 Sobic005G106500--Sobic004G140600 Sobic005G106500--Sobic001G219600 Sobic010G279700 Sobic010G279700 Sobic005G106500--Sobic010G279700 Sobic007G203200 Sobic007G203200 Sobic005G106500--Sobic007G203200 Sobic001G493200 Sobic001G493200 Sobic005G106500--Sobic001G493200 Sobic009G024400 Sobic009G024400 Sobic005G106500--Sobic009G024400 Sobic003G266001 Sobic003G266001 Sobic005G106500--Sobic003G266001 Sobic006G194400 Sobic006G194400 Sobic005G106500--Sobic006G194400 Sobic003G141500--Sobic001G219600 Sobic003G141500--Sobic008G047800 Sobic009G050900 Sobic009G050900 Sobic003G141500--Sobic009G050900 Sobic003G141500--Sobic001G493200 Sobic003G141500--Sobic002G143500 Sobic003G443100 Sobic003G443100 Sobic003G141500--Sobic003G443100 Sobic003G141500--Sobic009G126400 Sobic003G141500--Sobic001G071400 Sobic006G200600 Sobic006G200600 Sobic003G141500--Sobic006G200600 Sobic001G194200 Sobic001G194200 Sobic001G002000--Sobic001G194200 Sobic001G289800 Sobic001G289800 Sobic001G002000--Sobic001G289800 Sobic004G291900 Sobic004G291900 Sobic001G002000--Sobic004G291900 Sobic003G422500 Sobic003G422500 Sobic001G002000--Sobic003G422500 Sobic010G247800 Sobic010G247800 Sobic001G002000--Sobic010G247800 Sobic010G010700 Sobic010G010700 Sobic001G002000--Sobic010G010700 Sobic004G034900 Sobic004G034900 Sobic001G002000--Sobic004G034900 Sobic001G289600 Sobic001G289600 Sobic001G002000--Sobic001G289600 Sobic002G411600 Sobic002G411600 Sobic001G002000--Sobic002G411600 Sobic001G227200--Sobic004G140600 Sobic009G177500 Sobic009G177500 Sobic001G227200--Sobic009G177500 Sobic001G227200--Sobic005G106500 Sobic010G139000 Sobic010G139000 Sobic001G227200--Sobic010G139000 Sobic001G227200--Sobic002G343901 Sobic004G258700 Sobic004G258700 Sobic001G227200--Sobic004G258700 Sobic001G311500 Sobic001G311500 Sobic001G227200--Sobic001G311500 Sobic001G036050 Sobic001G036050 Sobic001G227200--Sobic001G036050 Sobic001G456900 Sobic001G456900 Sobic001G227200--Sobic001G456900 Sobic001G016600 Sobic001G016600 Sobic009G094900--Sobic001G016600 Sobic007G105100 Sobic007G105100 Sobic009G094900--Sobic007G105100 Sobic009G094900--Sobic006G058100 Sobic009G094900--Sobic002G143500 Sobic004G208900 Sobic004G208900 Sobic009G094900--Sobic004G208900 Sobic005G112300 Sobic005G112300 Sobic009G094900--Sobic005G112300 Sobic009G027300 Sobic009G027300 Sobic009G094900--Sobic009G027300 Sobic009G094900--Sobic001G289600 Sobic008G150700 Sobic008G150700 Sobic009G094900--Sobic008G150700 Sobic002G006900 Sobic002G006900 Sobic008G047800--Sobic002G006900 Sobic004G084300 Sobic004G084300 Sobic008G047800--Sobic004G084300 Sobic001G512700 Sobic001G512700 Sobic008G047800--Sobic001G512700 Sobic001G155000 Sobic001G155000 Sobic008G047800--Sobic001G155000 Sobic009G040600 Sobic009G040600 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic007G217000 Sobic007G217000 Sobic008G047800--Sobic007G217000 Sobic004G274200 Sobic004G274200 Sobic008G047800--Sobic004G274200 Sobic002G309600 Sobic002G309600 Sobic008G047800--Sobic002G309600 Sobic002G180666 Sobic002G180666 Sobic002G343901--Sobic002G180666 Sobic002G343901--Sobic006G216800 Sobic002G343901--Sobic009G177500 Sobic003G148000 Sobic003G148000 Sobic002G343901--Sobic003G148000 Sobic002G343901--Sobic001G227200 Sobic008G162900 Sobic008G162900 Sobic002G343901--Sobic008G162900 Sobic002G343901--Sobic004G140600 Sobic002G133400 Sobic002G133400 Sobic002G343901--Sobic002G133400 Sobic002G343901--Sobic005G112300 Sobic010G277500--Sobic004G208900 Sobic006G209850 Sobic006G209850 Sobic010G277500--Sobic006G209850 Sobic007G065400 Sobic007G065400 Sobic010G277500--Sobic007G065400 Sobic009G260500 Sobic009G260500 Sobic010G277500--Sobic009G260500 Sobic010G277500--Sobic003G280800 Sobic004G009600 Sobic004G009600 Sobic010G277500--Sobic004G009600 Sobic008G028700 Sobic008G028700 Sobic010G277500--Sobic008G028700 Sobic010G277500--Sobic004G258700 Sobic010G277500--Sobic006G216800
Octagon: transcription factors


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