Gene annotation
Transcriptome id Sobic.004G225000.1
Synonym Sb04g026930, AtNIT4, NIT4, nitrilase 4B1, NIT4B1
Functional annotation - (PubMedID : 27964718)
nitrilase, putative, expressed
UniProt C5XY70
Pfam PF00795
Panther DB PTHR23088 PTHR23088:SF31
NCBI CDD -
KEGG Orthology K01501; nitrilase
Gene Ontology GO:0016810; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds GO:0006807nitrogen compound metabolic process


Orthologs (automatic annotation)
TAIR AT5G22300 : nitrilase 4
RAP-DB (Rice) LOC_Os02g42330.1 : nitrilase, putative, expressed
MaizeGDB (Corn) Zm00025a021016 , Zm00025a032087
Brachypodium KQK00470
Barley HORVU6Hr1G059730.1 , HORVU6Hr1G059730.2 , HORVU6Hr1G059730.3 , HORVU6Hr1G059730.4 , HORVU6Hr1G059740.1 , HORVU6Hr1G059740.2 , HORVU6Hr1G059760.2 , HORVU6Hr1G059760.1
Wheat TraesCS6D02G215300 , TraesCS6B02G260800 , TraesCS6B02G260800 , TraesCS6A02G232400 , TraesCS6A02G232400
Populus -


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cDNA sequences
Sobic.004G225000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G002300 protein kinase family protein, putative, expressed K17535: serine/threonine-protein kinase TNNI3K
2 Sobic.009G199200 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
3 Sobic.001G000200 TBC domain containing protein, expressed -
4 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
5 Sobic.004G021200 expressed protein -
6 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1
7 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
8 Sobic.008G078300 la domain containing protein, expressed K15191: La-related protein 7
9 Sobic.004G018300 expressed protein K06970: 23S rRNA (adenine1618-N6)-methyltransferase
10 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
11 Sobic.001G235900 white-brown complex homolog protein, putative, expressed -
12 Sobic.001G186800 ATPAP18/PAP18, putative, expressed -
13 Sobic.004G033600 expressed protein -
14 Sobic.007G161800 kinase, pfkB family, putative, expressed -
15 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
16 Sobic.001G167200 DNA-directed polymerase, putative, expressed K03511: DNA polymerase kappa
17 Sobic.009G047200 protein kinase domain containing protein, expressed -
18 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
19 Sobic.004G030100 glycosyltransferase, putative, expressed -
20 Sobic.002G260900 protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1


Gene co-expression network
sample Sobic004G225000 Sobic004G225000 Sobic007G002300 Sobic007G002300 Sobic004G225000--Sobic007G002300 Sobic009G199200 Sobic009G199200 Sobic004G225000--Sobic009G199200 Sobic001G000200 Sobic001G000200 Sobic004G225000--Sobic001G000200 Sobic008G083000 Sobic008G083000 Sobic004G225000--Sobic008G083000 Sobic004G021200 Sobic004G021200 Sobic004G225000--Sobic004G021200 Sobic002G396000 Sobic002G396000 Sobic004G225000--Sobic002G396000 Sobic009G017400 Sobic009G017400 Sobic004G225000--Sobic009G017400 Sobic008G078300 Sobic008G078300 Sobic004G225000--Sobic008G078300 Sobic004G018300 Sobic004G018300 Sobic004G225000--Sobic004G018300 Sobic004G030100 Sobic004G030100 Sobic007G002300--Sobic004G030100 Sobic003G280800 Sobic003G280800 Sobic007G002300--Sobic003G280800 Sobic002G143500 Sobic002G143500 Sobic007G002300--Sobic002G143500 Sobic006G058100 Sobic006G058100 Sobic007G002300--Sobic006G058100 Sobic003G141500 Sobic003G141500 Sobic007G002300--Sobic003G141500 Sobic009G047200 Sobic009G047200 Sobic007G002300--Sobic009G047200 Sobic002G313400 Sobic002G313400 Sobic007G002300--Sobic002G313400 Sobic001G071400 Sobic001G071400 Sobic007G002300--Sobic001G071400 Sobic007G002300--Sobic002G396000 Sobic009G199200--Sobic001G000200 Sobic003G233600 Sobic003G233600 Sobic009G199200--Sobic003G233600 Sobic008G004600 Sobic008G004600 Sobic009G199200--Sobic008G004600 Sobic002G317300 Sobic002G317300 Sobic009G199200--Sobic002G317300 Sobic010G205800 Sobic010G205800 Sobic009G199200--Sobic010G205800 Sobic001G186800 Sobic001G186800 Sobic009G199200--Sobic001G186800 Sobic001G281600 Sobic001G281600 Sobic009G199200--Sobic001G281600 Sobic002G166300 Sobic002G166300 Sobic009G199200--Sobic002G166300 Sobic002G260900 Sobic002G260900 Sobic009G199200--Sobic002G260900 Sobic001G000200--Sobic009G199200 Sobic001G000200--Sobic010G205800 Sobic006G237400 Sobic006G237400 Sobic001G000200--Sobic006G237400 Sobic001G253700 Sobic001G253700 Sobic001G000200--Sobic001G253700 Sobic001G000200--Sobic008G004600 Sobic001G000200--Sobic003G233600 Sobic001G291000 Sobic001G291000 Sobic001G000200--Sobic001G291000 Sobic001G079200 Sobic001G079200 Sobic001G000200--Sobic001G079200 Sobic001G000200--Sobic001G071400 Sobic005G084100 Sobic005G084100 Sobic008G083000--Sobic005G084100 Sobic010G279700 Sobic010G279700 Sobic008G083000--Sobic010G279700 Sobic008G131000 Sobic008G131000 Sobic008G083000--Sobic008G131000 Sobic008G083000--Sobic001G281600 Sobic009G050900 Sobic009G050900 Sobic008G083000--Sobic009G050900 Sobic003G401100 Sobic003G401100 Sobic008G083000--Sobic003G401100 Sobic008G011100 Sobic008G011100 Sobic008G083000--Sobic008G011100 Sobic008G083000--Sobic004G018300 Sobic007G000800 Sobic007G000800 Sobic008G083000--Sobic007G000800 Sobic003G266001 Sobic003G266001 Sobic004G021200--Sobic003G266001 Sobic008G103200 Sobic008G103200 Sobic004G021200--Sobic008G103200 Sobic004G021200--Sobic010G279700 Sobic004G021200--Sobic001G281600 Sobic004G021200--Sobic008G083000 Sobic006G273200 Sobic006G273200 Sobic004G021200--Sobic006G273200 Sobic005G106500 Sobic005G106500 Sobic004G021200--Sobic005G106500 Sobic007G096000 Sobic007G096000 Sobic004G021200--Sobic007G096000 Sobic002G310200 Sobic002G310200 Sobic004G021200--Sobic002G310200 Sobic002G158700 Sobic002G158700 Sobic002G396000--Sobic002G158700 Sobic006G128900 Sobic006G128900 Sobic002G396000--Sobic006G128900 Sobic002G396000--Sobic007G096000 Sobic002G396000--Sobic003G280800 Sobic001G511500 Sobic001G511500 Sobic002G396000--Sobic001G511500 Sobic009G210500 Sobic009G210500 Sobic002G396000--Sobic009G210500 Sobic002G396000--Sobic004G018300 Sobic002G396000--Sobic008G131000 Sobic001G090400 Sobic001G090400 Sobic002G396000--Sobic001G090400 Sobic006G199200 Sobic006G199200 Sobic009G017400--Sobic006G199200 Sobic001G493200 Sobic001G493200 Sobic009G017400--Sobic001G493200 Sobic009G017400--Sobic004G021200 Sobic002G276100 Sobic002G276100 Sobic009G017400--Sobic002G276100 Sobic009G017400--Sobic001G281600 Sobic009G017400--Sobic003G266001 Sobic009G017400--Sobic002G313400 Sobic002G122600 Sobic002G122600 Sobic009G017400--Sobic002G122600 Sobic009G017400--Sobic010G205800 Sobic003G258900 Sobic003G258900 Sobic008G078300--Sobic003G258900 Sobic008G078300--Sobic002G396000 Sobic001G081000 Sobic001G081000 Sobic008G078300--Sobic001G081000 Sobic002G417800 Sobic002G417800 Sobic008G078300--Sobic002G417800 Sobic008G078300--Sobic004G018300 Sobic003G221600 Sobic003G221600 Sobic008G078300--Sobic003G221600 Sobic001G498200 Sobic001G498200 Sobic008G078300--Sobic001G498200 Sobic003G018900 Sobic003G018900 Sobic008G078300--Sobic003G018900 Sobic009G046700 Sobic009G046700 Sobic008G078300--Sobic009G046700 Sobic004G087600 Sobic004G087600 Sobic004G018300--Sobic004G087600 Sobic001G167200 Sobic001G167200 Sobic004G018300--Sobic001G167200 Sobic004G018300--Sobic008G011100 Sobic004G018300--Sobic002G158700 Sobic004G018300--Sobic002G396000 Sobic004G018300--Sobic001G081000 Sobic004G018300--Sobic008G083000 Sobic009G126400 Sobic009G126400 Sobic004G018300--Sobic009G126400 Sobic004G223600 Sobic004G223600 Sobic004G018300--Sobic004G223600
Octagon: transcription factors


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