Gene annotation
Transcriptome id Sobic.004G033600.1
Synonym Sb04g002896
Functional annotation expressed protein
UniProt C5XTY2
Pfam PF12274
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g48730.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G033600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G039400 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
2 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
3 Sobic.001G081000 nucleotide-binding protein-like, putative, expressed K03593: mrp, ATP-binding protein involved in chromosome partitioning
4 Sobic.006G199200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
5 Sobic.001G008200 expressed protein K13211: GC-rich sequence DNA-binding factor
6 Sobic.002G425700 ribonucleases P/MRP protein subunit POP1 containing protein, expressed K01164: ribonuclease P/MRP protein subunit POP1
7 Sobic.009G056200 arginyl-tRNA synthetase, putative, expressed K01887: RARS, arginyl-tRNA synthetase
8 Sobic.010G079900 AT hook-containing DNA-binding protein, putative, expressed -
9 Sobic.001G000200 TBC domain containing protein, expressed -
10 Sobic.002G059300 OsFBX181 - F-box domain containing protein, expressed -
11 Sobic.006G102100 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
12 Sobic.006G153900 transporter, major facilitator family, putative, expressed -
13 Sobic.006G182200 WD domain, G-beta repeat domain containing protein, expressed -
14 Sobic.008G078300 la domain containing protein, expressed K15191: La-related protein 7
15 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
16 Sobic.008G051200 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
17 Sobic.009G138700 WD repeat-containing protein 55, putative, expressed -
18 Sobic.001G515100 ATP binding protein, putative, expressed K06883: uncharacterized protein
19 Sobic.003G382500 serine/threonine-protein kinase RIO-like, putative, expressed K07179: RIO kinase 2
20 Sobic.008G080200 leucine-rich repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic004G033600 Sobic004G033600 Sobic007G039400 Sobic007G039400 Sobic004G033600--Sobic007G039400 Sobic001G493200 Sobic001G493200 Sobic004G033600--Sobic001G493200 Sobic001G081000 Sobic001G081000 Sobic004G033600--Sobic001G081000 Sobic006G199200 Sobic006G199200 Sobic004G033600--Sobic006G199200 Sobic001G008200 Sobic001G008200 Sobic004G033600--Sobic001G008200 Sobic002G425700 Sobic002G425700 Sobic004G033600--Sobic002G425700 Sobic009G056200 Sobic009G056200 Sobic004G033600--Sobic009G056200 Sobic010G079900 Sobic010G079900 Sobic004G033600--Sobic010G079900 Sobic001G000200 Sobic001G000200 Sobic004G033600--Sobic001G000200 Sobic001G291800 Sobic001G291800 Sobic007G039400--Sobic001G291800 Sobic009G138700 Sobic009G138700 Sobic007G039400--Sobic009G138700 Sobic001G259000 Sobic001G259000 Sobic007G039400--Sobic001G259000 Sobic001G145400 Sobic001G145400 Sobic007G039400--Sobic001G145400 Sobic004G340400 Sobic004G340400 Sobic007G039400--Sobic004G340400 Sobic010G007100 Sobic010G007100 Sobic007G039400--Sobic010G007100 Sobic004G353000 Sobic004G353000 Sobic007G039400--Sobic004G353000 Sobic010G176500 Sobic010G176500 Sobic007G039400--Sobic010G176500 Sobic007G039400--Sobic004G033600 Sobic009G084900 Sobic009G084900 Sobic001G493200--Sobic009G084900 Sobic003G266001 Sobic003G266001 Sobic001G493200--Sobic003G266001 Sobic010G059500 Sobic010G059500 Sobic001G493200--Sobic010G059500 Sobic001G433800 Sobic001G433800 Sobic001G493200--Sobic001G433800 Sobic004G072100 Sobic004G072100 Sobic001G493200--Sobic004G072100 Sobic004G096400 Sobic004G096400 Sobic001G493200--Sobic004G096400 Sobic007G132100 Sobic007G132100 Sobic001G493200--Sobic007G132100 Sobic006G077200 Sobic006G077200 Sobic001G493200--Sobic006G077200 Sobic003G408600 Sobic003G408600 Sobic001G493200--Sobic003G408600 Sobic004G018300 Sobic004G018300 Sobic001G081000--Sobic004G018300 Sobic003G221600 Sobic003G221600 Sobic001G081000--Sobic003G221600 Sobic008G131000 Sobic008G131000 Sobic001G081000--Sobic008G131000 Sobic003G141500 Sobic003G141500 Sobic001G081000--Sobic003G141500 Sobic008G014500 Sobic008G014500 Sobic001G081000--Sobic008G014500 Sobic003G258900 Sobic003G258900 Sobic001G081000--Sobic003G258900 Sobic008G083000 Sobic008G083000 Sobic001G081000--Sobic008G083000 Sobic007G220300 Sobic007G220300 Sobic001G081000--Sobic007G220300 Sobic009G145101 Sobic009G145101 Sobic001G081000--Sobic009G145101 Sobic003G195000 Sobic003G195000 Sobic006G199200--Sobic003G195000 Sobic010G205800 Sobic010G205800 Sobic006G199200--Sobic010G205800 Sobic006G199200--Sobic001G493200 Sobic001G241100 Sobic001G241100 Sobic006G199200--Sobic001G241100 Sobic005G027400 Sobic005G027400 Sobic006G199200--Sobic005G027400 Sobic006G199200--Sobic010G079900 Sobic001G121200 Sobic001G121200 Sobic006G199200--Sobic001G121200 Sobic006G160300 Sobic006G160300 Sobic006G199200--Sobic006G160300 Sobic001G289800 Sobic001G289800 Sobic006G199200--Sobic001G289800 Sobic004G309900 Sobic004G309900 Sobic001G008200--Sobic004G309900 Sobic005G172500 Sobic005G172500 Sobic001G008200--Sobic005G172500 Sobic001G227400 Sobic001G227400 Sobic001G008200--Sobic001G227400 Sobic001G008200--Sobic001G493200 Sobic003G133900 Sobic003G133900 Sobic001G008200--Sobic003G133900 Sobic006G240100 Sobic006G240100 Sobic001G008200--Sobic006G240100 Sobic004G155600 Sobic004G155600 Sobic001G008200--Sobic004G155600 Sobic001G473600 Sobic001G473600 Sobic001G008200--Sobic001G473600 Sobic001G008200--Sobic001G145400 Sobic007G065100 Sobic007G065100 Sobic002G425700--Sobic007G065100 Sobic006G153900 Sobic006G153900 Sobic002G425700--Sobic006G153900 Sobic002G276100 Sobic002G276100 Sobic002G425700--Sobic002G276100 Sobic007G165600 Sobic007G165600 Sobic002G425700--Sobic007G165600 Sobic010G143800 Sobic010G143800 Sobic002G425700--Sobic010G143800 Sobic001G261501 Sobic001G261501 Sobic002G425700--Sobic001G261501 Sobic001G498600 Sobic001G498600 Sobic002G425700--Sobic001G498600 Sobic005G122700 Sobic005G122700 Sobic002G425700--Sobic005G122700 Sobic001G090500 Sobic001G090500 Sobic002G425700--Sobic001G090500 Sobic009G056200--Sobic005G172500 Sobic001G194200 Sobic001G194200 Sobic009G056200--Sobic001G194200 Sobic009G056200--Sobic001G227400 Sobic006G055200 Sobic006G055200 Sobic009G056200--Sobic006G055200 Sobic009G056200--Sobic003G195000 Sobic007G207200 Sobic007G207200 Sobic009G056200--Sobic007G207200 Sobic008G063300 Sobic008G063300 Sobic009G056200--Sobic008G063300 Sobic002G142900 Sobic002G142900 Sobic009G056200--Sobic002G142900 Sobic006G055300 Sobic006G055300 Sobic009G056200--Sobic006G055300 Sobic010G079900--Sobic005G027400 Sobic001G309400 Sobic001G309400 Sobic010G079900--Sobic001G309400 Sobic001G260400 Sobic001G260400 Sobic010G079900--Sobic001G260400 Sobic010G079900--Sobic006G199200 Sobic003G086900 Sobic003G086900 Sobic010G079900--Sobic003G086900 Sobic003G184699 Sobic003G184699 Sobic010G079900--Sobic003G184699 Sobic004G142900 Sobic004G142900 Sobic010G079900--Sobic004G142900 Sobic003G139900 Sobic003G139900 Sobic010G079900--Sobic003G139900 Sobic001G222250 Sobic001G222250 Sobic010G079900--Sobic001G222250 Sobic009G199200 Sobic009G199200 Sobic001G000200--Sobic009G199200 Sobic001G000200--Sobic010G205800 Sobic006G237400 Sobic006G237400 Sobic001G000200--Sobic006G237400 Sobic001G253700 Sobic001G253700 Sobic001G000200--Sobic001G253700 Sobic008G004600 Sobic008G004600 Sobic001G000200--Sobic008G004600 Sobic003G233600 Sobic003G233600 Sobic001G000200--Sobic003G233600 Sobic001G291000 Sobic001G291000 Sobic001G000200--Sobic001G291000 Sobic001G079200 Sobic001G079200 Sobic001G000200--Sobic001G079200 Sobic001G071400 Sobic001G071400 Sobic001G000200--Sobic001G071400
Octagon: transcription factors


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