Gene annotation
Transcriptome id Sobic.001G008200.1
Synonym Sb01g000820, ILP1
Functional annotation expressed protein
UniProt A0A1B6QGQ5
Pfam PF07842
Panther DB PTHR12214 PTHR12214:SF0
NCBI CDD -
KEGG Orthology K13211; GC-rich sequence DNA-binding factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0003677DNA binding GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G08550 : GC-rich sequence DNA-binding factor-like protein
RAP-DB (Rice) LOC_Os03g63670.2 : expressed protein
MaizeGDB (Corn) Zm00025a030832 , Zm00025a050637 , Zm00025a050636 , Zm00025a009084 , Zm00025a051670 , Zm00025a051669
Brachypodium PNT71389 , PNT71388 , PNT71387 , PNT71392 , PNT71390 , PNT71391
Barley HORVU5Hr1G123420.1 , HORVU5Hr1G123420.3 , HORVU5Hr1G123420.2 , HORVU5Hr1G123420.5 , HORVU5Hr1G123420.4 , HORVU5Hr1G123420.7 , HORVU5Hr1G123420.6
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
2 Sobic.005G172500 WD repeat-containing protein, putative, expressed K08266: MLST8, target of rapamycin complex subunit LST8
3 Sobic.001G227400 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
5 Sobic.003G133900 exonuclease, putative, expressed K18417: ERI1 exoribonuclease 2
6 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
7 Sobic.004G155600 dnaJ domain containing protein, expressed -
8 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
9 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
10 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
11 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
12 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
13 Sobic.010G118000 PHD-finger family protein, expressed K17586: PHD and RING finger domain-containing protein 1
14 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
15 Sobic.007G212300 RNA recognition motif containing protein, putative, expressed -
16 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
17 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
18 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
19 Sobic.010G116600 FHA domain containing protein, putative, expressed -
20 Sobic.002G295500 expressed protein -


Gene co-expression network
sample Sobic001G008200 Sobic001G008200 Sobic004G309900 Sobic004G309900 Sobic001G008200--Sobic004G309900 Sobic005G172500 Sobic005G172500 Sobic001G008200--Sobic005G172500 Sobic001G227400 Sobic001G227400 Sobic001G008200--Sobic001G227400 Sobic001G493200 Sobic001G493200 Sobic001G008200--Sobic001G493200 Sobic003G133900 Sobic003G133900 Sobic001G008200--Sobic003G133900 Sobic006G240100 Sobic006G240100 Sobic001G008200--Sobic006G240100 Sobic004G155600 Sobic004G155600 Sobic001G008200--Sobic004G155600 Sobic001G473600 Sobic001G473600 Sobic001G008200--Sobic001G473600 Sobic001G145400 Sobic001G145400 Sobic001G008200--Sobic001G145400 Sobic004G309900--Sobic003G133900 Sobic007G183900 Sobic007G183900 Sobic004G309900--Sobic007G183900 Sobic003G062300 Sobic003G062300 Sobic004G309900--Sobic003G062300 Sobic006G077200 Sobic006G077200 Sobic004G309900--Sobic006G077200 Sobic004G096400 Sobic004G096400 Sobic004G309900--Sobic004G096400 Sobic002G366400 Sobic002G366400 Sobic004G309900--Sobic002G366400 Sobic006G210000 Sobic006G210000 Sobic004G309900--Sobic006G210000 Sobic003G416700 Sobic003G416700 Sobic004G309900--Sobic003G416700 Sobic004G309900--Sobic001G008200 Sobic004G131300 Sobic004G131300 Sobic005G172500--Sobic004G131300 Sobic006G148100 Sobic006G148100 Sobic005G172500--Sobic006G148100 Sobic009G056200 Sobic009G056200 Sobic005G172500--Sobic009G056200 Sobic005G172500--Sobic001G493200 Sobic005G172500--Sobic001G227400 Sobic002G371300 Sobic002G371300 Sobic005G172500--Sobic002G371300 Sobic002G142900 Sobic002G142900 Sobic005G172500--Sobic002G142900 Sobic003G408600 Sobic003G408600 Sobic005G172500--Sobic003G408600 Sobic004G257100 Sobic004G257100 Sobic005G172500--Sobic004G257100 Sobic009G044800 Sobic009G044800 Sobic001G227400--Sobic009G044800 Sobic007G218000 Sobic007G218000 Sobic001G227400--Sobic007G218000 Sobic001G227400--Sobic001G493200 Sobic001G493700 Sobic001G493700 Sobic001G227400--Sobic001G493700 Sobic006G088200 Sobic006G088200 Sobic001G227400--Sobic006G088200 Sobic009G084900 Sobic009G084900 Sobic001G227400--Sobic009G084900 Sobic003G195000 Sobic003G195000 Sobic001G227400--Sobic003G195000 Sobic001G227400--Sobic005G172500 Sobic001G289800 Sobic001G289800 Sobic001G227400--Sobic001G289800 Sobic001G493200--Sobic009G084900 Sobic003G266001 Sobic003G266001 Sobic001G493200--Sobic003G266001 Sobic010G059500 Sobic010G059500 Sobic001G493200--Sobic010G059500 Sobic001G433800 Sobic001G433800 Sobic001G493200--Sobic001G433800 Sobic004G072100 Sobic004G072100 Sobic001G493200--Sobic004G072100 Sobic001G493200--Sobic004G096400 Sobic007G132100 Sobic007G132100 Sobic001G493200--Sobic007G132100 Sobic001G493200--Sobic006G077200 Sobic001G493200--Sobic003G408600 Sobic003G133900--Sobic004G309900 Sobic003G133900--Sobic001G493200 Sobic002G083500 Sobic002G083500 Sobic003G133900--Sobic002G083500 Sobic001G398800 Sobic001G398800 Sobic003G133900--Sobic001G398800 Sobic003G133900--Sobic007G183900 Sobic003G133900--Sobic005G172500 Sobic003G133900--Sobic006G210000 Sobic004G200200 Sobic004G200200 Sobic003G133900--Sobic004G200200 Sobic007G071200 Sobic007G071200 Sobic003G133900--Sobic007G071200 Sobic006G240100--Sobic009G044800 Sobic006G240100--Sobic003G416700 Sobic002G154000 Sobic002G154000 Sobic006G240100--Sobic002G154000 Sobic006G240100--Sobic007G132100 Sobic006G240100--Sobic007G218000 Sobic003G360400 Sobic003G360400 Sobic006G240100--Sobic003G360400 Sobic010G204400 Sobic010G204400 Sobic006G240100--Sobic010G204400 Sobic001G354600 Sobic001G354600 Sobic006G240100--Sobic001G354600 Sobic006G240100--Sobic004G072100 Sobic006G014100 Sobic006G014100 Sobic004G155600--Sobic006G014100 Sobic006G270600 Sobic006G270600 Sobic004G155600--Sobic006G270600 Sobic006G080400 Sobic006G080400 Sobic004G155600--Sobic006G080400 Sobic004G355800 Sobic004G355800 Sobic004G155600--Sobic004G355800 Sobic002G425500 Sobic002G425500 Sobic004G155600--Sobic002G425500 Sobic006G118700 Sobic006G118700 Sobic004G155600--Sobic006G118700 Sobic004G155600--Sobic006G210000 Sobic002G145800 Sobic002G145800 Sobic004G155600--Sobic002G145800 Sobic001G002600 Sobic001G002600 Sobic004G155600--Sobic001G002600 Sobic002G034600 Sobic002G034600 Sobic001G473600--Sobic002G034600 Sobic003G352200 Sobic003G352200 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G395100 Sobic001G395100 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic006G086600 Sobic006G086600 Sobic001G145400--Sobic006G086600 Sobic001G035200 Sobic001G035200 Sobic001G145400--Sobic001G035200 Sobic001G145400--Sobic010G059500 Sobic001G145400--Sobic006G077200 Sobic003G405500 Sobic003G405500 Sobic001G145400--Sobic003G405500 Sobic010G007100 Sobic010G007100 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000
Octagon: transcription factors


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