Gene annotation
Transcriptome id Sobic.003G382500.2,Sobic.003G382500.1
Synonym
Functional annotation serine/threonine-protein kinase RIO-like, putative, expressed
UniProt A0A1B6Q7F8
Pfam PF01636 PF09202
Panther DB PTHR10593 PTHR10593:SF36
NCBI CDD -
KEGG Orthology K07179; RIO kinase 2
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004674protein serine/threonine kinase activity


Orthologs (automatic annotation)
TAIR AT3G51270 : protein serine/threonine kinases;ATP binding;catalytics
RAP-DB (Rice) LOC_Os01g66520.1 : serine/threonine-protein kinase RIO-like, putative, expressed
MaizeGDB (Corn) Zm00025a039478 , Zm00025a039929 , Zm00025a026499
Brachypodium PNT73345 , KQK10959
Barley HORVU3Hr1G090460.10 , HORVU3Hr1G090460.11 , HORVU3Hr1G090460.12 , HORVU3Hr1G090460.13 , HORVU3Hr1G090460.14 , HORVU3Hr1G090460.15 , HORVU3Hr1G090460.16 , HORVU3Hr1G090460.17 , HORVU3Hr1G090460.18 , HORVU3Hr1G090460.19 , HORVU3Hr1G090460.2 , HORVU3Hr1G090460.3 , HORVU3Hr1G090460.1 , HORVU3Hr1G090460.6 , HORVU3Hr1G090460.7 , HORVU3Hr1G090460.4 , HORVU3Hr1G090460.5 , HORVU3Hr1G090460.8 , HORVU3Hr1G090460.9 , HORVU3Hr1G090460.21 , HORVU3Hr1G090460.20 , HORVU3Hr1G090460.23 , HORVU3Hr1G090460.22
Wheat TraesCS3D02G398000 , TraesCS3B02G436600 , TraesCS3A02G403100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G138700 WD repeat-containing protein 55, putative, expressed -
2 Sobic.008G098600 DNA-directed RNA polymerase III subunit RPC9, putative, expressed -
3 Sobic.006G084000 CDK5RAP1, putative, expressed K15865: threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1
4 Sobic.003G407600 Mak16 protein domain containing protein, expressed K14831: protein MAK16
5 Sobic.001G017700 diphthamide biosynthesis protein, putative, expressed K17866: diphthamide biosynthesis protein 2
6 Sobic.003G287100 NADPH reductase, putative, expressed -
7 Sobic.007G112600 co-chaperone GrpE protein, putative, expressed K03687: molecular chaperone GrpE
8 Sobic.010G007100 AAA family ATPase, putative, expressed K14571: RIX7, ribosome biogenesis ATPase
9 Sobic.008G009600 double-stranded RNA binding motif containing protein, expressed -
10 Sobic.006G102100 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
11 Sobic.003G006400 metallo-beta-lactamase family protein, putative, expressed K00784: ribonuclease Z
12 Sobic.001G259000 initiation factor 2 subunit family domain containing protein, expressed K03754: translation initiation factor eIF-2B subunit beta
13 Sobic.001G081000 nucleotide-binding protein-like, putative, expressed K03593: mrp, ATP-binding protein involved in chromosome partitioning
14 Sobic.010G247400 Brix domain containing protein, putative, expressed K14561: U3 small nucleolar ribonucleoprotein protein IMP4
15 Sobic.009G145101 - -
16 Sobic.006G086600 IKI3 family protein, expressed K11373: ELP1, IKI3, elongator complex protein 1
17 Sobic.004G033600 expressed protein -
18 Sobic.006G010400 tRNA-dihydrouridine synthase 3-like, putative, expressed K05544: tRNA-dihydrouridine synthase 3
19 Sobic.009G046700 ranBP1 domain containing protein, expressed K15304: Ran-binding protein 3
20 Sobic.008G160000 tetratricopeptide repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic003G382500 Sobic003G382500 Sobic009G138700 Sobic009G138700 Sobic003G382500--Sobic009G138700 Sobic008G098600 Sobic008G098600 Sobic003G382500--Sobic008G098600 Sobic006G084000 Sobic006G084000 Sobic003G382500--Sobic006G084000 Sobic003G407600 Sobic003G407600 Sobic003G382500--Sobic003G407600 Sobic001G017700 Sobic001G017700 Sobic003G382500--Sobic001G017700 Sobic003G287100 Sobic003G287100 Sobic003G382500--Sobic003G287100 Sobic007G112600 Sobic007G112600 Sobic003G382500--Sobic007G112600 Sobic010G007100 Sobic010G007100 Sobic003G382500--Sobic010G007100 Sobic008G009600 Sobic008G009600 Sobic003G382500--Sobic008G009600 Sobic007G039400 Sobic007G039400 Sobic009G138700--Sobic007G039400 Sobic008G160000 Sobic008G160000 Sobic009G138700--Sobic008G160000 Sobic001G259000 Sobic001G259000 Sobic009G138700--Sobic001G259000 Sobic009G138700--Sobic003G382500 Sobic002G406600 Sobic002G406600 Sobic009G138700--Sobic002G406600 Sobic003G178900 Sobic003G178900 Sobic009G138700--Sobic003G178900 Sobic006G235700 Sobic006G235700 Sobic009G138700--Sobic006G235700 Sobic006G135900 Sobic006G135900 Sobic009G138700--Sobic006G135900 Sobic009G143800 Sobic009G143800 Sobic009G138700--Sobic009G143800 Sobic008G098600--Sobic010G007100 Sobic003G214300 Sobic003G214300 Sobic008G098600--Sobic003G214300 Sobic008G098600--Sobic003G382500 Sobic009G046700 Sobic009G046700 Sobic008G098600--Sobic009G046700 Sobic003G006400 Sobic003G006400 Sobic008G098600--Sobic003G006400 Sobic006G142400 Sobic006G142400 Sobic008G098600--Sobic006G142400 Sobic009G251200 Sobic009G251200 Sobic008G098600--Sobic009G251200 Sobic010G264000 Sobic010G264000 Sobic008G098600--Sobic010G264000 Sobic001G322600 Sobic001G322600 Sobic008G098600--Sobic001G322600 Sobic006G269900 Sobic006G269900 Sobic006G084000--Sobic006G269900 Sobic006G084000--Sobic008G160000 Sobic006G010400 Sobic006G010400 Sobic006G084000--Sobic006G010400 Sobic006G084000--Sobic003G407600 Sobic004G224600 Sobic004G224600 Sobic006G084000--Sobic004G224600 Sobic006G084000--Sobic001G259000 Sobic006G084000--Sobic003G382500 Sobic010G247400 Sobic010G247400 Sobic006G084000--Sobic010G247400 Sobic009G246500 Sobic009G246500 Sobic006G084000--Sobic009G246500 Sobic003G407600--Sobic006G084000 Sobic003G407600--Sobic010G247400 Sobic003G407600--Sobic003G382500 Sobic003G407600--Sobic008G009600 Sobic004G173100 Sobic004G173100 Sobic003G407600--Sobic004G173100 Sobic010G216300 Sobic010G216300 Sobic003G407600--Sobic010G216300 Sobic003G407600--Sobic001G322600 Sobic001G401400 Sobic001G401400 Sobic003G407600--Sobic001G401400 Sobic001G230200 Sobic001G230200 Sobic003G407600--Sobic001G230200 Sobic001G145400 Sobic001G145400 Sobic001G017700--Sobic001G145400 Sobic006G208500 Sobic006G208500 Sobic001G017700--Sobic006G208500 Sobic006G086600 Sobic006G086600 Sobic001G017700--Sobic006G086600 Sobic006G136400 Sobic006G136400 Sobic001G017700--Sobic006G136400 Sobic003G057700 Sobic003G057700 Sobic001G017700--Sobic003G057700 Sobic001G017700--Sobic003G287100 Sobic001G017700--Sobic008G009600 Sobic009G101200 Sobic009G101200 Sobic001G017700--Sobic009G101200 Sobic003G300300 Sobic003G300300 Sobic001G017700--Sobic003G300300 Sobic004G339100 Sobic004G339100 Sobic003G287100--Sobic004G339100 Sobic003G287100--Sobic001G017700 Sobic001G201500 Sobic001G201500 Sobic003G287100--Sobic001G201500 Sobic001G201400 Sobic001G201400 Sobic003G287100--Sobic001G201400 Sobic007G184500 Sobic007G184500 Sobic003G287100--Sobic007G184500 Sobic003G287100--Sobic003G382500 Sobic007G077400 Sobic007G077400 Sobic003G287100--Sobic007G077400 Sobic006G114500 Sobic006G114500 Sobic003G287100--Sobic006G114500 Sobic003G287100--Sobic006G208500 Sobic001G015400 Sobic001G015400 Sobic007G112600--Sobic001G015400 Sobic003G146600 Sobic003G146600 Sobic007G112600--Sobic003G146600 Sobic002G150700 Sobic002G150700 Sobic007G112600--Sobic002G150700 Sobic004G208500 Sobic004G208500 Sobic007G112600--Sobic004G208500 Sobic007G112600--Sobic001G145400 Sobic010G223300 Sobic010G223300 Sobic007G112600--Sobic010G223300 Sobic001G471000 Sobic001G471000 Sobic007G112600--Sobic001G471000 Sobic008G103300 Sobic008G103300 Sobic007G112600--Sobic008G103300 Sobic006G083100 Sobic006G083100 Sobic007G112600--Sobic006G083100 Sobic010G007100--Sobic001G145400 Sobic008G147200 Sobic008G147200 Sobic010G007100--Sobic008G147200 Sobic004G340400 Sobic004G340400 Sobic010G007100--Sobic004G340400 Sobic010G007100--Sobic006G086600 Sobic005G137700 Sobic005G137700 Sobic010G007100--Sobic005G137700 Sobic006G077200 Sobic006G077200 Sobic010G007100--Sobic006G077200 Sobic002G235200 Sobic002G235200 Sobic010G007100--Sobic002G235200 Sobic006G002800 Sobic006G002800 Sobic010G007100--Sobic006G002800 Sobic003G042400 Sobic003G042400 Sobic010G007100--Sobic003G042400 Sobic006G049600 Sobic006G049600 Sobic008G009600--Sobic006G049600 Sobic004G011000 Sobic004G011000 Sobic008G009600--Sobic004G011000 Sobic008G009600--Sobic001G017700 Sobic001G142100 Sobic001G142100 Sobic008G009600--Sobic001G142100 Sobic010G073200 Sobic010G073200 Sobic008G009600--Sobic010G073200 Sobic008G009600--Sobic003G407600 Sobic008G009600--Sobic001G145400 Sobic008G009600--Sobic009G101200 Sobic006G226300 Sobic006G226300 Sobic008G009600--Sobic006G226300
Octagon: transcription factors


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