Gene annotation
Transcriptome id Sobic.007G112600.2,Sobic.007G112600.1,Sobic.007G112600.3
Synonym AR192, Sb07g017190
Functional annotation co-chaperone GrpE protein, putative, expressed
UniProt A0A1B6PH82 , A0A1B6PH89 , A0A1B6PHD8
Pfam PF01025
Panther DB PTHR21237 PTHR21237:SF28
NCBI CDD KOG3003; Molecular chaperone of the GrpE family
KEGG Orthology K03687; molecular chaperone GrpE
Gene Ontology GO:0006457; protein folding GO:0000774adenyl-nucleotide exchange factor activity


Orthologs (automatic annotation)
TAIR AT4G26780 : Co-chaperone GrpE family protein
RAP-DB (Rice) LOC_Os08g25090.2,LOC_Os08g25090.1 : co-chaperone GrpE protein, putative, expressed
MaizeGDB (Corn) Zm00025a030776
Brachypodium KQJ96321 , KQJ96322
Barley HORVU5Hr1G053680.5 , HORVU5Hr1G053680.7 , HORVU5Hr1G053680.6 , HORVU5Hr1G053680.1 , HORVU5Hr1G053680.3 , HORVU5Hr1G053680.2 , HORVU5Hr1G053680.4
Wheat TraesCS5A02G176600 , TraesCS5A02G176600 , TraesCS5A02G176600 , TraesCS5A02G176600 , TraesCS5B02G173300 , TraesCS5B02G173300 , TraesCS5B02G173300 , TraesCS5B02G173300 , TraesCS5D02G180300 , TraesCS5D02G180300 , TraesCS5D02G180300 , TraesCS5D02G180300
Populus PNT12497 , PNT12500


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cDNA sequences
Sobic.007G112600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
2 Sobic.003G146600 pumilio-family RNA binding repeat containing protein, expressed K14790: nucleolar protein 9
3 Sobic.002G150700 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
4 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
5 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
6 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
7 Sobic.001G471000 RNase L inhibitor protein-related, putative, expressed K09140: pre-rRNA-processing protein TSR3
8 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
9 Sobic.006G083100 formyl transferase, putative, expressed K00601: phosphoribosylglycinamide formyltransferase
10 Sobic.006G002800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K15332: tRNA (uracil-5-)-methyltransferase
11 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
12 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
13 Sobic.001G251600 SET domain protein 123, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
14 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
15 Sobic.006G277000 heat shock protein DnaJ, putative, expressed -
16 Sobic.001G455800 methionyl-tRNA synthetase, putative, expressed K01874: MARS, methionyl-tRNA synthetase
17 Sobic.006G084000 CDK5RAP1, putative, expressed K15865: threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1
18 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
19 Sobic.010G264000 expressed protein(PubMedID : 28640841)@expressed protein -
20 Sobic.003G382500 serine/threonine-protein kinase RIO-like, putative, expressed K07179: RIO kinase 2


Gene co-expression network
sample Sobic007G112600 Sobic007G112600 Sobic001G015400 Sobic001G015400 Sobic007G112600--Sobic001G015400 Sobic003G146600 Sobic003G146600 Sobic007G112600--Sobic003G146600 Sobic002G150700 Sobic002G150700 Sobic007G112600--Sobic002G150700 Sobic004G208500 Sobic004G208500 Sobic007G112600--Sobic004G208500 Sobic001G145400 Sobic001G145400 Sobic007G112600--Sobic001G145400 Sobic010G223300 Sobic010G223300 Sobic007G112600--Sobic010G223300 Sobic001G471000 Sobic001G471000 Sobic007G112600--Sobic001G471000 Sobic008G103300 Sobic008G103300 Sobic007G112600--Sobic008G103300 Sobic006G083100 Sobic006G083100 Sobic007G112600--Sobic006G083100 Sobic001G099900 Sobic001G099900 Sobic001G015400--Sobic001G099900 Sobic001G015400--Sobic004G208500 Sobic007G005500 Sobic007G005500 Sobic001G015400--Sobic007G005500 Sobic006G021700 Sobic006G021700 Sobic001G015400--Sobic006G021700 Sobic003G143800 Sobic003G143800 Sobic001G015400--Sobic003G143800 Sobic006G260500 Sobic006G260500 Sobic001G015400--Sobic006G260500 Sobic003G182300 Sobic003G182300 Sobic001G015400--Sobic003G182300 Sobic002G398700 Sobic002G398700 Sobic001G015400--Sobic002G398700 Sobic006G106300 Sobic006G106300 Sobic001G015400--Sobic006G106300 Sobic003G308500 Sobic003G308500 Sobic003G146600--Sobic003G308500 Sobic004G224600 Sobic004G224600 Sobic003G146600--Sobic004G224600 Sobic006G002800 Sobic006G002800 Sobic003G146600--Sobic006G002800 Sobic002G235200 Sobic002G235200 Sobic003G146600--Sobic002G235200 Sobic003G146600--Sobic001G145400 Sobic003G146600--Sobic002G150700 Sobic001G065100 Sobic001G065100 Sobic003G146600--Sobic001G065100 Sobic003G039000 Sobic003G039000 Sobic003G146600--Sobic003G039000 Sobic003G012000 Sobic003G012000 Sobic003G146600--Sobic003G012000 Sobic002G408900 Sobic002G408900 Sobic002G150700--Sobic002G408900 Sobic002G150700--Sobic006G002800 Sobic001G455800 Sobic001G455800 Sobic002G150700--Sobic001G455800 Sobic002G150700--Sobic003G146600 Sobic002G150700--Sobic001G099900 Sobic002G150700--Sobic004G208500 Sobic002G150700--Sobic002G398700 Sobic002G150700--Sobic001G145400 Sobic003G304400 Sobic003G304400 Sobic002G150700--Sobic003G304400 Sobic001G467100 Sobic001G467100 Sobic004G208500--Sobic001G467100 Sobic004G208500--Sobic001G099900 Sobic004G208500--Sobic001G015400 Sobic004G208500--Sobic002G408900 Sobic004G208500--Sobic002G150700 Sobic001G161700 Sobic001G161700 Sobic004G208500--Sobic001G161700 Sobic004G208500--Sobic010G223300 Sobic005G110499 Sobic005G110499 Sobic004G208500--Sobic005G110499 Sobic005G163700 Sobic005G163700 Sobic004G208500--Sobic005G163700 Sobic006G086600 Sobic006G086600 Sobic001G145400--Sobic006G086600 Sobic001G035200 Sobic001G035200 Sobic001G145400--Sobic001G035200 Sobic010G059500 Sobic010G059500 Sobic001G145400--Sobic010G059500 Sobic006G077200 Sobic006G077200 Sobic001G145400--Sobic006G077200 Sobic003G405500 Sobic003G405500 Sobic001G145400--Sobic003G405500 Sobic010G007100 Sobic010G007100 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic009G084900 Sobic009G084900 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000 Sobic008G055900 Sobic008G055900 Sobic010G223300--Sobic008G055900 Sobic001G449900 Sobic001G449900 Sobic010G223300--Sobic001G449900 Sobic002G020700 Sobic002G020700 Sobic010G223300--Sobic002G020700 Sobic003G338500 Sobic003G338500 Sobic010G223300--Sobic003G338500 Sobic010G223300--Sobic006G260500 Sobic004G092500 Sobic004G092500 Sobic010G223300--Sobic004G092500 Sobic010G020400 Sobic010G020400 Sobic010G223300--Sobic010G020400 Sobic002G008800 Sobic002G008800 Sobic010G223300--Sobic002G008800 Sobic006G180000 Sobic006G180000 Sobic010G223300--Sobic006G180000 Sobic001G471000--Sobic007G112600 Sobic010G235200 Sobic010G235200 Sobic001G471000--Sobic010G235200 Sobic006G142400 Sobic006G142400 Sobic001G471000--Sobic006G142400 Sobic007G042900 Sobic007G042900 Sobic001G471000--Sobic007G042900 Sobic004G068500 Sobic004G068500 Sobic001G471000--Sobic004G068500 Sobic005G155100 Sobic005G155100 Sobic001G471000--Sobic005G155100 Sobic007G077400 Sobic007G077400 Sobic001G471000--Sobic007G077400 Sobic001G477700 Sobic001G477700 Sobic001G471000--Sobic001G477700 Sobic007G162800 Sobic007G162800 Sobic001G471000--Sobic007G162800 Sobic008G103300--Sobic008G055900 Sobic002G371700 Sobic002G371700 Sobic008G103300--Sobic002G371700 Sobic003G046300 Sobic003G046300 Sobic008G103300--Sobic003G046300 Sobic003G132000 Sobic003G132000 Sobic008G103300--Sobic003G132000 Sobic005G074500 Sobic005G074500 Sobic008G103300--Sobic005G074500 Sobic001G114500 Sobic001G114500 Sobic008G103300--Sobic001G114500 Sobic008G103300--Sobic001G145400 Sobic006G200700 Sobic006G200700 Sobic008G103300--Sobic006G200700 Sobic002G295500 Sobic002G295500 Sobic008G103300--Sobic002G295500 Sobic001G332300 Sobic001G332300 Sobic006G083100--Sobic001G332300 Sobic006G083100--Sobic007G112600 Sobic001G211900 Sobic001G211900 Sobic006G083100--Sobic001G211900 Sobic001G112400 Sobic001G112400 Sobic006G083100--Sobic001G112400 Sobic004G025300 Sobic004G025300 Sobic006G083100--Sobic004G025300 Sobic001G358500 Sobic001G358500 Sobic006G083100--Sobic001G358500 Sobic001G378200 Sobic001G378200 Sobic006G083100--Sobic001G378200 Sobic006G083100--Sobic001G099900 Sobic006G083100--Sobic006G142400
Octagon: transcription factors


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