Gene annotation
Transcriptome id Sobic.001G251600.6,Sobic.001G251600.1,Sobic.001G251600.2,Sobic.001G251600.3,Sobic.001G251600.4,Sobic.001G251600.5
Synonym SDG38, ATXR4, Sb01g022220
Functional annotation SET domain protein 123, putative, expressed
UniProt A0A1B6QKV6 , A0A1B6QKV7 , A0A1B6QKV8 , A0A1B6QKX8 , A0A1Z5S7U7
Pfam PF00856
Panther DB PTHR12197 PTHR12197:SF145
NCBI CDD -
KEGG Orthology K11426; [histone H3]-lysine4/36 N-trimethyltransferase SMYD
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G06620 : SET domain protein 38
RAP-DB (Rice) LOC_Os10g27060.2,LOC_Os10g27060.1 : SET domain protein 123, putative, expressed
MaizeGDB (Corn) Zm00025a006983
Brachypodium -
Barley HORVU7Hr1G093340.8 , HORVU7Hr1G093340.9 , HORVU7Hr1G093340.6 , HORVU7Hr1G093340.7 , HORVU7Hr1G093340.4 , HORVU7Hr1G093340.5 , HORVU7Hr1G093340.2 , HORVU7Hr1G093340.3 , HORVU7Hr1G093340.1 , HORVU7Hr1G093340.14 , HORVU7Hr1G093340.15 , HORVU7Hr1G093340.11 , HORVU7Hr1G093340.12 , HORVU7Hr1G093340.13
Wheat TraesCS7D02G391600 , TraesCS7D02G391600 , TraesCS7B02G297900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G010400 tRNA-dihydrouridine synthase 3-like, putative, expressed K05544: tRNA-dihydrouridine synthase 3
2 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
3 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
5 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
6 Sobic.009G249800 AARP2CN domain containing protein, expressed K14799: pre-rRNA-processing protein TSR1
7 Sobic.002G408900 adenyl cyclase, putative, expressed -
8 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7
9 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
10 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
11 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
12 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
13 Sobic.001G259000 initiation factor 2 subunit family domain containing protein, expressed K03754: translation initiation factor eIF-2B subunit beta
14 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
15 Sobic.004G017400 expressed protein -
16 Sobic.008G160000 tetratricopeptide repeat domain containing protein, expressed -
17 Sobic.002G014400 T-complex protein, putative, expressed K09497: T-complex protein 1 subunit epsilon
18 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
19 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
20 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9


Gene co-expression network
sample Sobic001G251600 Sobic001G251600 Sobic006G010400 Sobic006G010400 Sobic001G251600--Sobic006G010400 Sobic002G423500 Sobic002G423500 Sobic001G251600--Sobic002G423500 SobicK004100 SobicK004100 Sobic001G251600--SobicK004100 Sobic004G208500 Sobic004G208500 Sobic001G251600--Sobic004G208500 Sobic001G145400 Sobic001G145400 Sobic001G251600--Sobic001G145400 Sobic009G249800 Sobic009G249800 Sobic001G251600--Sobic009G249800 Sobic002G408900 Sobic002G408900 Sobic001G251600--Sobic002G408900 Sobic002G394600 Sobic002G394600 Sobic001G251600--Sobic002G394600 Sobic002G412700 Sobic002G412700 Sobic001G251600--Sobic002G412700 Sobic006G010400--Sobic001G251600 Sobic006G084000 Sobic006G084000 Sobic006G010400--Sobic006G084000 Sobic007G071900 Sobic007G071900 Sobic006G010400--Sobic007G071900 Sobic001G537500 Sobic001G537500 Sobic006G010400--Sobic001G537500 Sobic006G010400--Sobic009G249800 Sobic007G140400 Sobic007G140400 Sobic006G010400--Sobic007G140400 Sobic008G051200 Sobic008G051200 Sobic006G010400--Sobic008G051200 Sobic004G257100 Sobic004G257100 Sobic006G010400--Sobic004G257100 Sobic001G460500 Sobic001G460500 Sobic006G010400--Sobic001G460500 Sobic005G163700 Sobic005G163700 Sobic002G423500--Sobic005G163700 Sobic004G047200 Sobic004G047200 Sobic002G423500--Sobic004G047200 Sobic002G014400 Sobic002G014400 Sobic002G423500--Sobic002G014400 Sobic002G423500--Sobic001G460500 Sobic004G326600 Sobic004G326600 Sobic002G423500--Sobic004G326600 Sobic004G215700 Sobic004G215700 Sobic002G423500--Sobic004G215700 Sobic001G522000 Sobic001G522000 Sobic002G423500--Sobic001G522000 Sobic006G041100 Sobic006G041100 Sobic002G423500--Sobic006G041100 Sobic001G467100 Sobic001G467100 Sobic002G423500--Sobic001G467100 Sobic001G369000 Sobic001G369000 SobicK004100--Sobic001G369000 Sobic004G039600 Sobic004G039600 SobicK004100--Sobic004G039600 Sobic003G099300 Sobic003G099300 SobicK004100--Sobic003G099300 Sobic001G335900 Sobic001G335900 SobicK004100--Sobic001G335900 Sobic007G120500 Sobic007G120500 SobicK004100--Sobic007G120500 Sobic009G049400 Sobic009G049400 SobicK004100--Sobic009G049400 Sobic003G240700 Sobic003G240700 SobicK004100--Sobic003G240700 Sobic009G226400 Sobic009G226400 SobicK004100--Sobic009G226400 Sobic001G449900 Sobic001G449900 SobicK004100--Sobic001G449900 Sobic004G208500--Sobic001G467100 Sobic001G099900 Sobic001G099900 Sobic004G208500--Sobic001G099900 Sobic001G015400 Sobic001G015400 Sobic004G208500--Sobic001G015400 Sobic004G208500--Sobic002G408900 Sobic002G150700 Sobic002G150700 Sobic004G208500--Sobic002G150700 Sobic001G161700 Sobic001G161700 Sobic004G208500--Sobic001G161700 Sobic010G223300 Sobic010G223300 Sobic004G208500--Sobic010G223300 Sobic005G110499 Sobic005G110499 Sobic004G208500--Sobic005G110499 Sobic004G208500--Sobic005G163700 Sobic006G086600 Sobic006G086600 Sobic001G145400--Sobic006G086600 Sobic001G035200 Sobic001G035200 Sobic001G145400--Sobic001G035200 Sobic010G059500 Sobic010G059500 Sobic001G145400--Sobic010G059500 Sobic006G077200 Sobic006G077200 Sobic001G145400--Sobic006G077200 Sobic003G405500 Sobic003G405500 Sobic001G145400--Sobic003G405500 Sobic010G007100 Sobic010G007100 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic009G084900 Sobic009G084900 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000 Sobic009G249800--Sobic002G408900 Sobic009G249800--Sobic004G208500 Sobic009G249800--Sobic001G251600 Sobic002G246700 Sobic002G246700 Sobic009G249800--Sobic002G246700 Sobic002G295900 Sobic002G295900 Sobic009G249800--Sobic002G295900 Sobic009G249800--Sobic006G010400 Sobic009G249800--Sobic001G015400 Sobic009G249800--Sobic001G460500 Sobic004G256000 Sobic004G256000 Sobic009G249800--Sobic004G256000 Sobic002G408900--Sobic002G150700 Sobic002G408900--Sobic009G249800 Sobic002G408900--Sobic004G208500 Sobic002G408900--Sobic002G246700 Sobic002G408900--Sobic001G015400 Sobic002G398700 Sobic002G398700 Sobic002G408900--Sobic002G398700 Sobic006G193300 Sobic006G193300 Sobic002G408900--Sobic006G193300 Sobic002G160700 Sobic002G160700 Sobic002G408900--Sobic002G160700 Sobic002G408900--Sobic001G099900 Sobic002G341800 Sobic002G341800 Sobic002G394600--Sobic002G341800 Sobic006G044600 Sobic006G044600 Sobic002G394600--Sobic006G044600 Sobic002G394600--Sobic002G014400 Sobic002G394600--Sobic001G251600 Sobic009G190300 Sobic009G190300 Sobic002G394600--Sobic009G190300 Sobic004G194900 Sobic004G194900 Sobic002G394600--Sobic004G194900 Sobic001G404100 Sobic001G404100 Sobic002G394600--Sobic001G404100 Sobic007G177300 Sobic007G177300 Sobic002G394600--Sobic007G177300 Sobic004G310500 Sobic004G310500 Sobic002G394600--Sobic004G310500 Sobic001G248100 Sobic001G248100 Sobic002G412700--Sobic001G248100 Sobic002G412700--Sobic003G405500 Sobic003G314700 Sobic003G314700 Sobic002G412700--Sobic003G314700 Sobic004G034700 Sobic004G034700 Sobic002G412700--Sobic004G034700 Sobic003G209400 Sobic003G209400 Sobic002G412700--Sobic003G209400 Sobic007G047600 Sobic007G047600 Sobic002G412700--Sobic007G047600 Sobic010G085200 Sobic010G085200 Sobic002G412700--Sobic010G085200 Sobic002G119600 Sobic002G119600 Sobic002G412700--Sobic002G119600 Sobic010G139500 Sobic010G139500 Sobic002G412700--Sobic010G139500
Octagon: transcription factors


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